RNA–Protein interactions for RNA: ENST00000520525.1

TRAPPC13-212, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-212ENST00000520525 C7P10643 843 aa10.42□□□□□ -0.74
TRAPPC13-212ENST00000520525 METRNQ9UJH8 293 aa10.42□□□□□ -0.74
TRAPPC13-212ENST00000520525 POTEJP0CG39 1038 aa10.41□□□□□ -0.74
TRAPPC13-212ENST00000520525 TSPYL2Q9H2G4 693 aaPredicted RBP10.41□□□□□ -0.74
TRAPPC13-212ENST00000520525 SLC39A7Q92504 469 aa10.4□□□□□ -0.74
TRAPPC13-212ENST00000520525 POTEMA6NI47 508 aa10.39□□□□□ -0.75
TRAPPC13-212ENST00000520525 CCDC61Q9Y6R9 512 aa10.38□□□□□ -0.75
TRAPPC13-212ENST00000520525 POTEGQ6S5H5 508 aa10.36□□□□□ -0.75
TRAPPC13-212ENST00000520525 KIF12Q96FN5 646 aa10.34□□□□□ -0.75
TRAPPC13-212ENST00000520525 ATN1P54259 1190 aaPredicted RBP10.33□□□□□ -0.76
TRAPPC13-212ENST00000520525 MAMSTRQ6ZN01 415 aa10.31□□□□□ -0.76
TRAPPC13-212ENST00000520525 BMP2KQ9NSY1 1161 aaPredicted RBP10.28□□□□□ -0.76
TRAPPC13-212ENST00000520525 TRPC6Q9Y210 931 aa10.28□□□□□ -0.76
TRAPPC13-212ENST00000520525 POTEFA5A3E0 1075 aa10.26□□□□□ -0.77
TRAPPC13-212ENST00000520525 MAP3K13O43283 966 aa10.26□□□□□ -0.77
TRAPPC13-212ENST00000520525 MIER1Q8N108 512 aa10.26□□□□□ -0.77
TRAPPC13-212ENST00000520525 RASEFQ8IZ41 740 aa10.25□□□□□ -0.77
TRAPPC13-212ENST00000520525 PCDH10Q9P2E7 1040 aa10.25□□□□□ -0.77
TRAPPC13-212ENST00000520525 LCE2DQ5TA82 110 aaPredicted RBP10.24□□□□□ -0.77
TRAPPC13-212ENST00000520525 PLEKHG5O94827 1062 aa10.22□□□□□ -0.77
TRAPPC13-212ENST00000520525 TIE1P35590 1138 aa10.22□□□□□ -0.77
TRAPPC13-212ENST00000520525 FKBP8Q14318 412 aa10.22□□□□□ -0.77
TRAPPC13-212ENST00000520525 FAM163AQ96GL9 167 aaPredicted RBP10.22□□□□□ -0.77
TRAPPC13-212ENST00000520525 SCUBE2Q9NQ36 999 aa10.22□□□□□ -0.77
TRAPPC13-212ENST00000520525 TTLL13PA6NNM8 815 aa10.17□□□□□ -0.78
TRAPPC13-212ENST00000520525 COLQQ9Y215 455 aaPredicted RBP10.17□□□□□ -0.78
TRAPPC13-212ENST00000520525 SGIP1Q9BQI5 828 aa10.13□□□□□ -0.79
TRAPPC13-212ENST00000520525 SEC24BO95487 1268 aa10.12□□□□□ -0.79
TRAPPC13-212ENST00000520525 PLCD3Q8N3E9 789 aa10.12□□□□□ -0.79
TRAPPC13-212ENST00000520525 NUBP1P53384 320 aa10.11□□□□□ -0.79
TRAPPC13-212ENST00000520525 TRIM35Q9UPQ4 493 aa10.1□□□□□ -0.79
TRAPPC13-212ENST00000520525 IER5LQ5T953 404 aa10.09□□□□□ -0.79
TRAPPC13-212ENST00000520525 PCDHB13Q9Y5F0 798 aa10.09□□□□□ -0.79
TRAPPC13-212ENST00000520525 IFNL1Q8IU54 200 aa10.05□□□□□ -0.8
TRAPPC13-212ENST00000520525 ZBTB47Q9UFB7 747 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC13-212ENST00000520525 TMEM106CQ9BVX2 250 aa10□□□□□ -0.81
TRAPPC13-212ENST00000520525 FAM212AQ96EL1 285 aa9.99□□□□□ -0.81
TRAPPC13-212ENST00000520525 CDAN1Q8IWY9 1227 aa9.98□□□□□ -0.81
TRAPPC13-212ENST00000520525 SLAIN1Q8ND83 568 aa9.98□□□□□ -0.81
TRAPPC13-212ENST00000520525 PLCG2P16885 1265 aa9.95□□□□□ -0.82
TRAPPC13-212ENST00000520525 IRX5P78411 483 aaPredicted RBP9.95□□□□□ -0.82
TRAPPC13-212ENST00000520525 ST18O60284 1047 aa9.94□□□□□ -0.82
TRAPPC13-212ENST00000520525 DCAF8Q5TAQ9 597 aa9.9□□□□□ -0.82
TRAPPC13-212ENST00000520525 OCEL1Q9H607 264 aa9.9□□□□□ -0.82
TRAPPC13-212ENST00000520525 FBXO3Q9UK99 471 aa9.9□□□□□ -0.82
TRAPPC13-212ENST00000520525 PYGBP11216 843 aa9.88□□□□□ -0.83
TRAPPC13-212ENST00000520525 PCDHB8Q9UN66 801 aa9.86□□□□□ -0.83
TRAPPC13-212ENST00000520525 VASPP50552 380 aaPredicted RBP9.82□□□□□ -0.84
TRAPPC13-212ENST00000520525 TMEM121BQ9BXQ6 578 aaPredicted RBP9.81□□□□□ -0.84
TRAPPC13-212ENST00000520525 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.8□□□□□ -0.84
TRAPPC13-212ENST00000520525 SNPHO15079 494 aa9.79□□□□□ -0.84
TRAPPC13-212ENST00000520525 PDCD7Q8N8D1 485 aaKnown RBP9.76□□□□□ -0.85
TRAPPC13-212ENST00000520525 SPNS2Q8IVW8 549 aa9.75□□□□□ -0.85
TRAPPC13-212ENST00000520525 MARVELD3Q96A59 401 aa9.75□□□□□ -0.85
TRAPPC13-212ENST00000520525 MMRN1Q13201 1228 aa9.74□□□□□ -0.85
TRAPPC13-212ENST00000520525 GSE1Q14687 1217 aa9.72□□□□□ -0.85
TRAPPC13-212ENST00000520525 ZNF467Q7Z7K2 595 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC13-212ENST00000520525 CHRM1P11229 460 aaPredicted RBP9.71□□□□□ -0.86
TRAPPC13-212ENST00000520525 MKRN3Q13064 507 aaKnown RBP9.7□□□□□ -0.86
TRAPPC13-212ENST00000520525 KLHL34Q8N239 644 aa9.7□□□□□ -0.86
TRAPPC13-212ENST00000520525 L3MBTL3Q96JM7 780 aaPredicted RBP9.7□□□□□ -0.86
TRAPPC13-212ENST00000520525 C3orf67Q6ZVT6 689 aa9.68□□□□□ -0.86
TRAPPC13-212ENST00000520525 IFNLR1Q8IU57 520 aaPredicted RBP9.68□□□□□ -0.86
TRAPPC13-212ENST00000520525 PSEN1P49768 467 aa9.67□□□□□ -0.86
TRAPPC13-212ENST00000520525 GOLGA2Q08379 1002 aa9.67□□□□□ -0.86
TRAPPC13-212ENST00000520525 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.67□□□□□ -0.86
TRAPPC13-212ENST00000520525 ILDR1Q86SU0 546 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC13-212ENST00000520525 POTEB3A0JP26 581 aa9.63□□□□□ -0.87
TRAPPC13-212ENST00000520525 POTEBQ6S5H4 581 aa9.63□□□□□ -0.87
TRAPPC13-212ENST00000520525 EMP3P54852 163 aa9.62□□□□□ -0.87
TRAPPC13-212ENST00000520525 DPY19L2Q6NUT2 758 aa9.6□□□□□ -0.87
TRAPPC13-212ENST00000520525 PDAP1Q13442 181 aaKnown RBP9.59□□□□□ -0.87
TRAPPC13-212ENST00000520525 HS3ST6Q96QI5 342 aa9.59□□□□□ -0.87
TRAPPC13-212ENST00000520525 KRTAP3-3Q9BYR6 98 aa9.59□□□□□ -0.87
TRAPPC13-212ENST00000520525 KRTAP3-2Q9BYR7 98 aa9.59□□□□□ -0.87
TRAPPC13-212ENST00000520525 FAM205CA6NFA0 338 aa9.58□□□□□ -0.88
TRAPPC13-212ENST00000520525 SPOCK2Q92563 424 aa9.57□□□□□ -0.88
TRAPPC13-212ENST00000520525 CABP2Q9NPB3 220 aa9.54□□□□□ -0.88
TRAPPC13-212ENST00000520525 HOXB3P14651 431 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC13-212ENST00000520525 BOLA1Q9Y3E2 137 aa9.53□□□□□ -0.88
TRAPPC13-212ENST00000520525 CIZ1Q9ULV3 898 aaPredicted RBP9.5□□□□□ -0.89
TRAPPC13-212ENST00000520525 G3V3G9 751 aa9.48□□□□□ -0.89
TRAPPC13-212ENST00000520525 HOXB1P14653 301 aaPredicted RBP9.47□□□□□ -0.89
TRAPPC13-212ENST00000520525 ZNF710Q8N1W2 664 aa9.44□□□□□ -0.9
TRAPPC13-212ENST00000520525 DOK7Q18PE1 504 aa9.42□□□□□ -0.9
TRAPPC13-212ENST00000520525 ERBB3P21860 1342 aa9.41□□□□□ -0.9
TRAPPC13-212ENST00000520525 EFCAB3Q8N7B9 438 aa9.41□□□□□ -0.9
TRAPPC13-212ENST00000520525 TMEM92Q6UXU6 159 aa9.36□□□□□ -0.91
TRAPPC13-212ENST00000520525 RIMBP2O15034 1052 aa9.35□□□□□ -0.91
TRAPPC13-212ENST00000520525 VARS2Q5ST30 1063 aaKnown RBP9.34□□□□□ -0.91
TRAPPC13-212ENST00000520525 MICALL2Q8IY33 904 aa9.34□□□□□ -0.91
TRAPPC13-212ENST00000520525 TRIM41Q8WV44 630 aa9.34□□□□□ -0.91
TRAPPC13-212ENST00000520525 ZSWIM6Q9HCJ5 1215 aa9.32□□□□□ -0.92
TRAPPC13-212ENST00000520525 GPR153Q6NV75 609 aa9.31□□□□□ -0.92
TRAPPC13-212ENST00000520525 ZNF687Q8N1G0 1237 aa9.31□□□□□ -0.92
TRAPPC13-212ENST00000520525 RNF25Q96BH1 459 aaPredicted RBP9.31□□□□□ -0.92
TRAPPC13-212ENST00000520525 SOX12O15370 315 aa9.3□□□□□ -0.92
TRAPPC13-212ENST00000520525 RNF166Q96A37 237 aaPredicted RBP9.3□□□□□ -0.92
TRAPPC13-212ENST00000520525 MS4A4AQ96JQ5 239 aa9.3□□□□□ -0.92
TRAPPC13-212ENST00000520525 MYT1LQ9UL68 1186 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms