RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 DCBLD2Q96PD2 775 aa14.93□□□□□ -0.02
CTHRC1-203ENST00000520337 ZBTB47Q9UFB7 747 aaPredicted RBP14.92□□□□□ -0.02
CTHRC1-203ENST00000520337 DCAF8L2P0C7V8 631 aa14.88□□□□□ -0.03
CTHRC1-203ENST00000520337 GALR2O43603 387 aaPredicted RBP14.85□□□□□ -0.03
CTHRC1-203ENST00000520337 MYO15BQ96JP2 1530 aa14.82□□□□□ -0.04
CTHRC1-203ENST00000520337 VASPP50552 380 aaPredicted RBP14.76□□□□□ -0.05
CTHRC1-203ENST00000520337 TSPYL2Q9H2G4 693 aaPredicted RBP14.76□□□□□ -0.05
CTHRC1-203ENST00000520337 NACADO15069 1562 aa14.76□□□□□ -0.05
CTHRC1-203ENST00000520337 POTEB2H3BUK9 544 aa14.75□□□□□ -0.05
CTHRC1-203ENST00000520337 PHF12Q96QT6 1004 aa14.75□□□□□ -0.05
CTHRC1-203ENST00000520337 OTUD5Q96G74 571 aa14.74□□□□□ -0.05
CTHRC1-203ENST00000520337 RASEFQ8IZ41 740 aa14.72□□□□□ -0.05
CTHRC1-203ENST00000520337 CCDC61Q9Y6R9 512 aa14.72□□□□□ -0.05
CTHRC1-203ENST00000520337 NUBP1P53384 320 aa14.69□□□□□ -0.06
CTHRC1-203ENST00000520337 PLSCR2Q9NRY7 297 aa14.66□□□□□ -0.06
CTHRC1-203ENST00000520337 PELP1Q8IZL8 1130 aaKnown RBP14.65□□□□□ -0.06
CTHRC1-203ENST00000520337 RB1CC1Q8TDY2 1594 aa14.64□□□□□ -0.07
CTHRC1-203ENST00000520337 FAM212AQ96EL1 285 aa14.63□□□□□ -0.07
CTHRC1-203ENST00000520337 KLHL34Q8N239 644 aa14.6□□□□□ -0.07
CTHRC1-203ENST00000520337 KIF12Q96FN5 646 aa14.6□□□□□ -0.07
CTHRC1-203ENST00000520337 SHROOM4Q9ULL8 1493 aa14.59□□□□□ -0.07
CTHRC1-203ENST00000520337 MS4A3Q96HJ5 214 aa14.59□□□□□ -0.07
CTHRC1-203ENST00000520337 SGIP1Q9BQI5 828 aa14.52□□□□□ -0.09
CTHRC1-203ENST00000520337 MAP3K13O43283 966 aa14.51□□□□□ -0.09
CTHRC1-203ENST00000520337 SCRIBQ14160 1630 aa14.51□□□□□ -0.09
CTHRC1-203ENST00000520337 ASTLQ6HA08 431 aaPredicted RBP14.5□□□□□ -0.09
CTHRC1-203ENST00000520337 DCAF8Q5TAQ9 597 aa14.49□□□□□ -0.09
CTHRC1-203ENST00000520337 POTEJP0CG39 1038 aa14.48□□□□□ -0.09
CTHRC1-203ENST00000520337 IFNLR1Q8IU57 520 aaPredicted RBP14.48□□□□□ -0.09
CTHRC1-203ENST00000520337 ATMINO43313 823 aaPredicted RBP14.47□□□□□ -0.09
CTHRC1-203ENST00000520337 POTEMA6NI47 508 aa14.46□□□□□ -0.09
CTHRC1-203ENST00000520337 GSE1Q14687 1217 aa14.46□□□□□ -0.09
CTHRC1-203ENST00000520337 UNC13AQ9UPW8 1703 aa14.46□□□□□ -0.1
CTHRC1-203ENST00000520337 SPOCK2Q92563 424 aa14.43□□□□□ -0.1
CTHRC1-203ENST00000520337 METRNQ9UJH8 293 aa14.43□□□□□ -0.1
CTHRC1-203ENST00000520337 PCDHB13Q9Y5F0 798 aa14.43□□□□□ -0.1
CTHRC1-203ENST00000520337 C7P10643 843 aa14.41□□□□□ -0.1
CTHRC1-203ENST00000520337 POTEGQ6S5H5 508 aa14.41□□□□□ -0.1
CTHRC1-203ENST00000520337 TIE1P35590 1138 aa14.4□□□□□ -0.1
CTHRC1-203ENST00000520337 SLC39A7Q92504 469 aa14.39□□□□□ -0.11
CTHRC1-203ENST00000520337 PYGBP11216 843 aa14.35□□□□□ -0.11
CTHRC1-203ENST00000520337 BMP2KQ9NSY1 1161 aaPredicted RBP14.35□□□□□ -0.11
CTHRC1-203ENST00000520337 IFNL1Q8IU54 200 aa14.34□□□□□ -0.11
CTHRC1-203ENST00000520337 TRPC6Q9Y210 931 aa14.34□□□□□ -0.11
CTHRC1-203ENST00000520337 ATN1P54259 1190 aaPredicted RBP14.32□□□□□ -0.12
CTHRC1-203ENST00000520337 CHRM1P11229 460 aaPredicted RBP14.31□□□□□ -0.12
CTHRC1-203ENST00000520337 TTLL13PA6NNM8 815 aa14.28□□□□□ -0.12
CTHRC1-203ENST00000520337 LCE2DQ5TA82 110 aaPredicted RBP14.28□□□□□ -0.12
CTHRC1-203ENST00000520337 POTEFA5A3E0 1075 aa14.26□□□□□ -0.13
CTHRC1-203ENST00000520337 MAMSTRQ6ZN01 415 aa14.26□□□□□ -0.13
CTHRC1-203ENST00000520337 BICRAQ9NZM4 1560 aa14.26□□□□□ -0.13
CTHRC1-203ENST00000520337 ZNF467Q7Z7K2 595 aaPredicted RBP14.25□□□□□ -0.13
CTHRC1-203ENST00000520337 CIZ1Q9ULV3 898 aaPredicted RBP14.25□□□□□ -0.13
CTHRC1-203ENST00000520337 PCDH10Q9P2E7 1040 aa14.24□□□□□ -0.13
CTHRC1-203ENST00000520337 TRIM41Q8WV44 630 aa14.21□□□□□ -0.13
CTHRC1-203ENST00000520337 TMEM106CQ9BVX2 250 aa14.21□□□□□ -0.13
CTHRC1-203ENST00000520337 PCDHB8Q9UN66 801 aa14.19□□□□□ -0.14
CTHRC1-203ENST00000520337 TRIM35Q9UPQ4 493 aa14.19□□□□□ -0.14
CTHRC1-203ENST00000520337 IER5LQ5T953 404 aa14.18□□□□□ -0.14
CTHRC1-203ENST00000520337 FAM163AQ96GL9 167 aaPredicted RBP14.16□□□□□ -0.14
CTHRC1-203ENST00000520337 SCUBE2Q9NQ36 999 aa14.16□□□□□ -0.14
CTHRC1-203ENST00000520337 SEC24BO95487 1268 aa14.09□□□□□ -0.15
CTHRC1-203ENST00000520337 COLQQ9Y215 455 aaPredicted RBP14.09□□□□□ -0.15
CTHRC1-203ENST00000520337 PSEN1P49768 467 aa14.06□□□□□ -0.16
CTHRC1-203ENST00000520337 PDAP1Q13442 181 aaKnown RBP14.06□□□□□ -0.16
CTHRC1-203ENST00000520337 CECR2Q9BXF3 1484 aa14.06□□□□□ -0.16
CTHRC1-203ENST00000520337 PLCG2P16885 1265 aa14□□□□□ -0.17
CTHRC1-203ENST00000520337 IRX5P78411 483 aaPredicted RBP13.99□□□□□ -0.17
CTHRC1-203ENST00000520337 GOLGA2Q08379 1002 aa13.99□□□□□ -0.17
CTHRC1-203ENST00000520337 RSF1Q96T23 1441 aaPredicted RBP13.98□□□□□ -0.17
CTHRC1-203ENST00000520337 SUPT5HO00267 1087 aaKnown RBP13.97□□□□□ -0.17
CTHRC1-203ENST00000520337 MROH2BQ7Z745 1585 aa13.96□□□□□ -0.17
CTHRC1-203ENST00000520337 OCEL1Q9H607 264 aa13.96□□□□□ -0.17
CTHRC1-203ENST00000520337 MKRN3Q13064 507 aaKnown RBP13.95□□□□□ -0.18
CTHRC1-203ENST00000520337 BAZ1AQ9NRL2 1556 aaPredicted RBP13.94□□□□□ -0.18
CTHRC1-203ENST00000520337 SMARCA4P51532 1647 aa13.93□□□□□ -0.18
CTHRC1-203ENST00000520337 RIOK3O14730 519 aaKnown RBP13.92□□□□□ -0.18
CTHRC1-203ENST00000520337 RNF25Q96BH1 459 aaPredicted RBP13.88□□□□□ -0.19
CTHRC1-203ENST00000520337 VGFO15240 615 aaPredicted RBP13.87□□□□□ -0.19
CTHRC1-203ENST00000520337 CABP2Q9NPB3 220 aa13.87□□□□□ -0.19
CTHRC1-203ENST00000520337 TAOK2Q9UL54 1235 aa13.87□□□□□ -0.19
CTHRC1-203ENST00000520337 WIZO95785 1651 aa13.86□□□□□ -0.19
CTHRC1-203ENST00000520337 CDAN1Q8IWY9 1227 aa13.86□□□□□ -0.19
CTHRC1-203ENST00000520337 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.84□□□□□ -0.19
CTHRC1-203ENST00000520337 ECM2O94769 699 aaPredicted RBP13.83□□□□□ -0.2
CTHRC1-203ENST00000520337 ILDR1Q86SU0 546 aaPredicted RBP13.83□□□□□ -0.2
CTHRC1-203ENST00000520337 PDCD7Q8N8D1 485 aaKnown RBP13.83□□□□□ -0.2
CTHRC1-203ENST00000520337 ST18O60284 1047 aa13.81□□□□□ -0.2
CTHRC1-203ENST00000520337 SLAIN1Q8ND83 568 aa13.81□□□□□ -0.2
CTHRC1-203ENST00000520337 PKD2Q13563 968 aa13.8□□□□□ -0.2
CTHRC1-203ENST00000520337 EIF4G1Q04637 1599 aaKnown RBP13.79□□□□□ -0.2
CTHRC1-203ENST00000520337 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.78□□□□□ -0.2
CTHRC1-203ENST00000520337 L3MBTL3Q96JM7 780 aaPredicted RBP13.78□□□□□ -0.2
CTHRC1-203ENST00000520337 ZFP91Q96JP5 570 aaPredicted RBP13.78□□□□□ -0.2
CTHRC1-203ENST00000520337 PEG3Q9GZU2 1588 aa13.78□□□□□ -0.2
CTHRC1-203ENST00000520337 EFCAB3Q8N7B9 438 aa13.73□□□□□ -0.21
CTHRC1-203ENST00000520337 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.71□□□□□ -0.21
CTHRC1-203ENST00000520337 ATAD2BQ9ULI0 1458 aa13.71□□□□□ -0.21
CTHRC1-203ENST00000520337 SOX12O15370 315 aa13.7□□□□□ -0.22
CTHRC1-203ENST00000520337 SMARCA2P51531 1590 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms