RNA–Protein interactions for RNA: ENST00000519596.5

PABPC1-211, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-211ENST00000519596 SPDYE4A6NLX3 237 aa8.36□□□□□ -1.07
PABPC1-211ENST00000519596 ATMINO43313 823 aaPredicted RBP8.36□□□□□ -1.07
PABPC1-211ENST00000519596 NPM1P06748 294 aaKnown RBP eCLIP8.36□□□□□ -1.07
PABPC1-211ENST00000519596 LCE2DQ5TA82 110 aaPredicted RBP8.35□□□□□ -1.07
PABPC1-211ENST00000519596 SLC39A7Q92504 469 aa8.34□□□□□ -1.07
PABPC1-211ENST00000519596 C7P10643 843 aa8.33□□□□□ -1.08
PABPC1-211ENST00000519596 PCDH10Q9P2E7 1040 aa8.33□□□□□ -1.08
PABPC1-211ENST00000519596 MAMSTRQ6ZN01 415 aa8.29□□□□□ -1.08
PABPC1-211ENST00000519596 ATN1P54259 1190 aaPredicted RBP8.28□□□□□ -1.08
PABPC1-211ENST00000519596 FAM163AQ96GL9 167 aaPredicted RBP8.28□□□□□ -1.08
PABPC1-211ENST00000519596 POTEFA5A3E0 1075 aa8.25□□□□□ -1.09
PABPC1-211ENST00000519596 TSPYL2Q9H2G4 693 aaPredicted RBP8.25□□□□□ -1.09
PABPC1-211ENST00000519596 SCUBE2Q9NQ36 999 aa8.23□□□□□ -1.09
PABPC1-211ENST00000519596 CCDC61Q9Y6R9 512 aa8.23□□□□□ -1.09
PABPC1-211ENST00000519596 TRPC6Q9Y210 931 aa8.22□□□□□ -1.09
PABPC1-211ENST00000519596 KIF12Q96FN5 646 aa8.2□□□□□ -1.1
PABPC1-211ENST00000519596 BMP2KQ9NSY1 1161 aaPredicted RBP8.2□□□□□ -1.1
PABPC1-211ENST00000519596 COLQQ9Y215 455 aaPredicted RBP8.15□□□□□ -1.1
PABPC1-211ENST00000519596 MAP3K13O43283 966 aa8.14□□□□□ -1.11
PABPC1-211ENST00000519596 TIE1P35590 1138 aa8.12□□□□□ -1.11
PABPC1-211ENST00000519596 CDAN1Q8IWY9 1227 aa8.12□□□□□ -1.11
PABPC1-211ENST00000519596 PROM2Q8N271 834 aa8.11□□□□□ -1.11
PABPC1-211ENST00000519596 TTLL13PA6NNM8 815 aa8.1□□□□□ -1.11
PABPC1-211ENST00000519596 RASEFQ8IZ41 740 aa8.09□□□□□ -1.11
PABPC1-211ENST00000519596 SEC24BO95487 1268 aa8.08□□□□□ -1.12
PABPC1-211ENST00000519596 TRIM35Q9UPQ4 493 aa8.04□□□□□ -1.12
PABPC1-211ENST00000519596 ST18O60284 1047 aa8.03□□□□□ -1.12
PABPC1-211ENST00000519596 IER5LQ5T953 404 aa8.02□□□□□ -1.13
PABPC1-211ENST00000519596 MIER1Q8N108 512 aa8.01□□□□□ -1.13
PABPC1-211ENST00000519596 SLAIN1Q8ND83 568 aa8.01□□□□□ -1.13
PABPC1-211ENST00000519596 PCDHB13Q9Y5F0 798 aa7.99□□□□□ -1.13
PABPC1-211ENST00000519596 PLEKHG5O94827 1062 aa7.97□□□□□ -1.13
PABPC1-211ENST00000519596 SGIP1Q9BQI5 828 aa7.97□□□□□ -1.13
PABPC1-211ENST00000519596 IFNL1Q8IU54 200 aa7.96□□□□□ -1.14
PABPC1-211ENST00000519596 MMRN1Q13201 1228 aa7.95□□□□□ -1.14
PABPC1-211ENST00000519596 TMEM106CQ9BVX2 250 aa7.94□□□□□ -1.14
PABPC1-211ENST00000519596 SPNS2Q8IVW8 549 aa7.93□□□□□ -1.14
PABPC1-211ENST00000519596 PLCG2P16885 1265 aa7.92□□□□□ -1.14
PABPC1-211ENST00000519596 NUBP1P53384 320 aa7.92□□□□□ -1.14
PABPC1-211ENST00000519596 IRX5P78411 483 aaPredicted RBP7.92□□□□□ -1.14
PABPC1-211ENST00000519596 PLCD3Q8N3E9 789 aa7.89□□□□□ -1.15
PABPC1-211ENST00000519596 MARVELD3Q96A59 401 aa7.87□□□□□ -1.15
PABPC1-211ENST00000519596 TMEM121BQ9BXQ6 578 aaPredicted RBP7.87□□□□□ -1.15
PABPC1-211ENST00000519596 OCEL1Q9H607 264 aa7.84□□□□□ -1.15
PABPC1-211ENST00000519596 FAM212AQ96EL1 285 aa7.83□□□□□ -1.16
PABPC1-211ENST00000519596 SNPHO15079 494 aa7.82□□□□□ -1.16
PABPC1-211ENST00000519596 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.82□□□□□ -1.16
PABPC1-211ENST00000519596 ZBTB47Q9UFB7 747 aaPredicted RBP7.81□□□□□ -1.16
PABPC1-211ENST00000519596 PCDHB8Q9UN66 801 aa7.78□□□□□ -1.16
PABPC1-211ENST00000519596 POTEB3A0JP26 581 aa7.77□□□□□ -1.17
PABPC1-211ENST00000519596 PYGBP11216 843 aa7.77□□□□□ -1.17
PABPC1-211ENST00000519596 POTEBQ6S5H4 581 aa7.77□□□□□ -1.17
PABPC1-211ENST00000519596 EMP3P54852 163 aa7.76□□□□□ -1.17
PABPC1-211ENST00000519596 PDCD7Q8N8D1 485 aaKnown RBP7.76□□□□□ -1.17
PABPC1-211ENST00000519596 KRTAP3-3Q9BYR6 98 aa7.76□□□□□ -1.17
PABPC1-211ENST00000519596 KRTAP3-2Q9BYR7 98 aa7.76□□□□□ -1.17
PABPC1-211ENST00000519596 FKBP8Q14318 412 aa7.75□□□□□ -1.17
PABPC1-211ENST00000519596 DCAF8Q5TAQ9 597 aa7.74□□□□□ -1.17
PABPC1-211ENST00000519596 HS3ST6Q96QI5 342 aa7.73□□□□□ -1.17
PABPC1-211ENST00000519596 FAM205CA6NFA0 338 aa7.71□□□□□ -1.18
PABPC1-211ENST00000519596 C3orf67Q6ZVT6 689 aa7.71□□□□□ -1.18
PABPC1-211ENST00000519596 L3MBTL3Q96JM7 780 aaPredicted RBP7.67□□□□□ -1.18
PABPC1-211ENST00000519596 MKRN3Q13064 507 aaKnown RBP7.65□□□□□ -1.18
PABPC1-211ENST00000519596 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.64□□□□□ -1.196e-20■□□□□ 10.8
PABPC1-211ENST00000519596 FBXO3Q9UK99 471 aa7.64□□□□□ -1.19
PABPC1-211ENST00000519596 GOLGA2Q08379 1002 aa7.63□□□□□ -1.19
PABPC1-211ENST00000519596 HOXB3P14651 431 aaPredicted RBP7.61□□□□□ -1.19
PABPC1-211ENST00000519596 DPY19L2Q6NUT2 758 aa7.61□□□□□ -1.19
PABPC1-211ENST00000519596 ZNF467Q7Z7K2 595 aaPredicted RBP7.61□□□□□ -1.19
PABPC1-211ENST00000519596 ILDR1Q86SU0 546 aaPredicted RBP7.6□□□□□ -1.19
PABPC1-211ENST00000519596 PSEN1P49768 467 aa7.59□□□□□ -1.19
PABPC1-211ENST00000519596 CHRM1P11229 460 aaPredicted RBP7.55□□□□□ -1.2
PABPC1-211ENST00000519596 HOXB1P14653 301 aaPredicted RBP7.55□□□□□ -1.2
PABPC1-211ENST00000519596 GSE1Q14687 1217 aa7.55□□□□□ -1.2
PABPC1-211ENST00000519596 RNF166Q96A37 237 aaPredicted RBP7.54□□□□□ -1.2
PABPC1-211ENST00000519596 ERBB3P21860 1342 aa7.53□□□□□ -1.2
PABPC1-211ENST00000519596 BOLA1Q9Y3E2 137 aa7.53□□□□□ -1.2
PABPC1-211ENST00000519596 ZNF710Q8N1W2 664 aa7.52□□□□□ -1.21
PABPC1-211ENST00000519596 PDAP1Q13442 181 aaKnown RBP7.5□□□□□ -1.21
PABPC1-211ENST00000519596 KLHL34Q8N239 644 aa7.5□□□□□ -1.21
PABPC1-211ENST00000519596 CABP2Q9NPB3 220 aa7.5□□□□□ -1.21
PABPC1-211ENST00000519596 G3V3G9 751 aa7.49□□□□□ -1.21
PABPC1-211ENST00000519596 DOK7Q18PE1 504 aa7.49□□□□□ -1.21
PABPC1-211ENST00000519596 VARS2Q5ST30 1063 aaKnown RBP7.49□□□□□ -1.21
PABPC1-211ENST00000519596 MYT1LQ9UL68 1186 aa7.48□□□□□ -1.21
PABPC1-211ENST00000519596 VASPP50552 380 aaPredicted RBP7.47□□□□□ -1.21
PABPC1-211ENST00000519596 RIMBP2O15034 1052 aa7.42□□□□□ -1.22
PABPC1-211ENST00000519596 TMEM92Q6UXU6 159 aa7.42□□□□□ -1.22
PABPC1-211ENST00000519596 ZNF687Q8N1G0 1237 aa7.42□□□□□ -1.22
PABPC1-211ENST00000519596 GPR153Q6NV75 609 aa7.39□□□□□ -1.23
PABPC1-211ENST00000519596 ZSWIM6Q9HCJ5 1215 aa7.38□□□□□ -1.23
PABPC1-211ENST00000519596 MICALL2Q8IY33 904 aa7.37□□□□□ -1.23
PABPC1-211ENST00000519596 EFCAB3Q8N7B9 438 aa7.37□□□□□ -1.23
PABPC1-211ENST00000519596 CIZ1Q9ULV3 898 aaPredicted RBP7.37□□□□□ -1.23
PABPC1-211ENST00000519596 PTGER2P43116 358 aa7.35□□□□□ -1.23
PABPC1-211ENST00000519596 ANKRD13DQ6ZTN6 518 aa7.35□□□□□ -1.23
PABPC1-211ENST00000519596 SPOCK2Q92563 424 aa7.35□□□□□ -1.23
PABPC1-211ENST00000519596 ARSIQ5FYB1 569 aa7.33□□□□□ -1.24
PABPC1-211ENST00000519596 KHSRPQ92945 711 aaKnown RBP eCLIP7.32□□□□□ -1.247e-7■■□□□ 13.4
PABPC1-211ENST00000519596 IFNLR1Q8IU57 520 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms