RNA–Protein interactions for RNA: ENST00000518960.5

MSR1-209, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 3

Gene MSR1, Length 353 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-209ENST00000518960 IFNLR1Q8IU57 520 aaPredicted RBP5.87□□□□□ -1.47
MSR1-209ENST00000518960 FAM212AQ96EL1 285 aa5.87□□□□□ -1.47
MSR1-209ENST00000518960 NUBP1P53384 320 aa5.86□□□□□ -1.47
MSR1-209ENST00000518960 LHX8Q68G74 356 aa5.86□□□□□ -1.47
MSR1-209ENST00000518960 POTEIP0CG38 1075 aa5.83□□□□□ -1.48
MSR1-209ENST00000518960 RASEFQ8IZ41 740 aa5.83□□□□□ -1.48
MSR1-209ENST00000518960 ZNF579Q8NAF0 562 aaKnown RBP5.83□□□□□ -1.48
MSR1-209ENST00000518960 CIZ1Q9ULV3 898 aaPredicted RBP5.82□□□□□ -1.48
MSR1-209ENST00000518960 CCDC61Q9Y6R9 512 aa5.8□□□□□ -1.48
MSR1-209ENST00000518960 TRIM41Q8WV44 630 aa5.79□□□□□ -1.48
MSR1-209ENST00000518960 SGIP1Q9BQI5 828 aa5.79□□□□□ -1.48
MSR1-209ENST00000518960 CHRM1P11229 460 aaPredicted RBP5.77□□□□□ -1.49
MSR1-209ENST00000518960 KIF12Q96FN5 646 aa5.77□□□□□ -1.49
MSR1-209ENST00000518960 DCBLD2Q96PD2 775 aa5.77□□□□□ -1.49
MSR1-209ENST00000518960 PHF12Q96QT6 1004 aa5.77□□□□□ -1.49
MSR1-209ENST00000518960 MAP3K13O43283 966 aa5.75□□□□□ -1.49
MSR1-209ENST00000518960 PYGBP11216 843 aa5.75□□□□□ -1.49
MSR1-209ENST00000518960 PCDHB13Q9Y5F0 798 aa5.75□□□□□ -1.49
MSR1-209ENST00000518960 PLSCR2Q9NRY7 297 aa5.74□□□□□ -1.49
MSR1-209ENST00000518960 ZNF467Q7Z7K2 595 aaPredicted RBP5.72□□□□□ -1.49
MSR1-209ENST00000518960 TAOK2Q9UL54 1235 aa5.72□□□□□ -1.49
MSR1-209ENST00000518960 GALR2O43603 387 aaPredicted RBP5.71□□□□□ -1.5
MSR1-209ENST00000518960 MS4A3Q96HJ5 214 aa5.71□□□□□ -1.5
MSR1-209ENST00000518960 ECM2O94769 699 aaPredicted RBP5.69□□□□□ -1.5
MSR1-209ENST00000518960 TIE1P35590 1138 aa5.68□□□□□ -1.5
MSR1-209ENST00000518960 IFNL1Q8IU54 200 aa5.68□□□□□ -1.5
MSR1-209ENST00000518960 POTEB2H3BUK9 544 aa5.66□□□□□ -1.5
MSR1-209ENST00000518960 PCDHB8Q9UN66 801 aa5.66□□□□□ -1.5
MSR1-209ENST00000518960 RIOK3O14730 519 aaKnown RBP5.64□□□□□ -1.51
MSR1-209ENST00000518960 ATMINO43313 823 aaPredicted RBP5.64□□□□□ -1.51
MSR1-209ENST00000518960 PSEN1P49768 467 aa5.64□□□□□ -1.51
MSR1-209ENST00000518960 GOLGA2Q08379 1002 aa5.64□□□□□ -1.51
MSR1-209ENST00000518960 PDAP1Q13442 181 aaKnown RBP5.64□□□□□ -1.51
MSR1-209ENST00000518960 ASTLQ6HA08 431 aaPredicted RBP5.64□□□□□ -1.51
MSR1-209ENST00000518960 TMEM106CQ9BVX2 250 aa5.64□□□□□ -1.51
MSR1-209ENST00000518960 VGFO15240 615 aaPredicted RBP5.63□□□□□ -1.51
MSR1-209ENST00000518960 C7P10643 843 aa5.63□□□□□ -1.51
MSR1-209ENST00000518960 PKD2Q13563 968 aa5.63□□□□□ -1.51
MSR1-209ENST00000518960 SLC39A7Q92504 469 aa5.63□□□□□ -1.51
MSR1-209ENST00000518960 OTUD5Q96G74 571 aa5.63□□□□□ -1.51
MSR1-209ENST00000518960 CCDC180Q9P1Z9 1646 aa5.63□□□□□ -1.51
MSR1-209ENST00000518960 AMER1Q5JTC6 1135 aaPredicted RBP5.62□□□□□ -1.51
MSR1-209ENST00000518960 BMP2KQ9NSY1 1161 aaPredicted RBP5.62□□□□□ -1.51
MSR1-209ENST00000518960 TTLL13PA6NNM8 815 aa5.61□□□□□ -1.51
MSR1-209ENST00000518960 ATN1P54259 1190 aaPredicted RBP5.61□□□□□ -1.51
MSR1-209ENST00000518960 MKRN3Q13064 507 aaKnown RBP5.61□□□□□ -1.51
MSR1-209ENST00000518960 PELP1Q8IZL8 1130 aaKnown RBP5.61□□□□□ -1.51
MSR1-209ENST00000518960 TRIM35Q9UPQ4 493 aa5.6□□□□□ -1.51
MSR1-209ENST00000518960 TRPC6Q9Y210 931 aa5.6□□□□□ -1.51
MSR1-209ENST00000518960 SEC24BO95487 1268 aa5.59□□□□□ -1.51
MSR1-209ENST00000518960 IER5LQ5T953 404 aa5.59□□□□□ -1.51
MSR1-209ENST00000518960 RGL2O15211 777 aa5.56□□□□□ -1.52
MSR1-209ENST00000518960 METRNQ9UJH8 293 aa5.56□□□□□ -1.52
MSR1-209ENST00000518960 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.55□□□□□ -1.52
MSR1-209ENST00000518960 POTEMA6NI47 508 aa5.55□□□□□ -1.52
MSR1-209ENST00000518960 PLCG2P16885 1265 aa5.55□□□□□ -1.52
MSR1-209ENST00000518960 RNF25Q96BH1 459 aaPredicted RBP5.55□□□□□ -1.52
MSR1-209ENST00000518960 ZFP91Q96JP5 570 aaPredicted RBP5.55□□□□□ -1.52
MSR1-209ENST00000518960 OCEL1Q9H607 264 aa5.55□□□□□ -1.52
MSR1-209ENST00000518960 CABP2Q9NPB3 220 aa5.55□□□□□ -1.52
MSR1-209ENST00000518960 STK25O00506 426 aa5.54□□□□□ -1.52
MSR1-209ENST00000518960 SOX12O15370 315 aa5.54□□□□□ -1.52
MSR1-209ENST00000518960 DCAF8L2P0C7V8 631 aa5.54□□□□□ -1.52
MSR1-209ENST00000518960 POTEJP0CG39 1038 aa5.54□□□□□ -1.52
MSR1-209ENST00000518960 STK24Q9Y6E0 443 aa5.54□□□□□ -1.52
MSR1-209ENST00000518960 POTEGQ6S5H5 508 aa5.53□□□□□ -1.52
MSR1-209ENST00000518960 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.53□□□□□ -1.52
MSR1-209ENST00000518960 MAMSTRQ6ZN01 415 aa5.52□□□□□ -1.53
MSR1-209ENST00000518960 BCL11BQ9C0K0 894 aaPredicted RBP5.52□□□□□ -1.53
MSR1-209ENST00000518960 G3V3G9 751 aa5.51□□□□□ -1.53
MSR1-209ENST00000518960 CHGAP10645 457 aaKnown RBP5.51□□□□□ -1.53
MSR1-209ENST00000518960 EFCAB3Q8N7B9 438 aa5.51□□□□□ -1.53
MSR1-209ENST00000518960 L3MBTL3Q96JM7 780 aaPredicted RBP5.51□□□□□ -1.53
MSR1-209ENST00000518960 IRX5P78411 483 aaPredicted RBP5.5□□□□□ -1.53
MSR1-209ENST00000518960 RTN4Q9NQC3 1192 aaKnown RBP5.5□□□□□ -1.53
MSR1-209ENST00000518960 NLRP6P59044 892 aa5.49□□□□□ -1.53
MSR1-209ENST00000518960 SCUBE2Q9NQ36 999 aa5.48□□□□□ -1.53
MSR1-209ENST00000518960 RYDENQ9NUL5 291 aaKnown RBP5.48□□□□□ -1.53
MSR1-209ENST00000518960 COLQQ9Y215 455 aaPredicted RBP5.48□□□□□ -1.53
MSR1-209ENST00000518960 HS6ST3Q8IZP7 471 aa5.47□□□□□ -1.53
MSR1-209ENST00000518960 ABCC9O60706 1549 aa5.47□□□□□ -1.53
MSR1-209ENST00000518960 LCE2DQ5TA82 110 aaPredicted RBP5.46□□□□□ -1.54
MSR1-209ENST00000518960 FAM163AQ96GL9 167 aaPredicted RBP5.46□□□□□ -1.54
MSR1-209ENST00000518960 POTEFA5A3E0 1075 aa5.45□□□□□ -1.54
MSR1-209ENST00000518960 ILDR1Q86SU0 546 aaPredicted RBP5.45□□□□□ -1.54
MSR1-209ENST00000518960 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.44□□□□□ -1.54
MSR1-209ENST00000518960 PHF8Q9UPP1 1060 aa5.44□□□□□ -1.54
MSR1-209ENST00000518960 DNAJC5Q9H3Z4 198 aa5.43□□□□□ -1.54
MSR1-209ENST00000518960 BOLA1Q9Y3E2 137 aa5.43□□□□□ -1.54
MSR1-209ENST00000518960 C3orf67Q6ZVT6 689 aa5.42□□□□□ -1.54
MSR1-209ENST00000518960 PDCD7Q8N8D1 485 aaKnown RBP5.42□□□□□ -1.54
MSR1-209ENST00000518960 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.42□□□□□ -1.54
MSR1-209ENST00000518960 DPY19L2Q6NUT2 758 aa5.41□□□□□ -1.54
MSR1-209ENST00000518960 BBXQ8WY36 941 aaPredicted RBP5.41□□□□□ -1.54
MSR1-209ENST00000518960 FBXO22Q8NEZ5 403 aa5.4□□□□□ -1.54
MSR1-209ENST00000518960 MFRPQ9BY79 579 aa5.4□□□□□ -1.54
MSR1-209ENST00000518960 SNPHO15079 494 aa5.38□□□□□ -1.55
MSR1-209ENST00000518960 SLAIN1Q8ND83 568 aa5.38□□□□□ -1.55
MSR1-209ENST00000518960 SPRYD3Q8NCJ5 442 aa5.37□□□□□ -1.55
MSR1-209ENST00000518960 MS4A4AQ96JQ5 239 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms