RNA–Protein interactions for RNA: ENST00000518700.4

MSC-AS1-203, MSC antisense RNA 1, humanhuman

TSL 5

Gene MSC-AS1, Length 470 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-203ENST00000518700 SPDYE1Q8NFV5 336 aaPredicted RBP9.2□□□□□ -0.94
MSC-AS1-203ENST00000518700 TRIM41Q8WV44 630 aa9.2□□□□□ -0.94
MSC-AS1-203ENST00000518700 CLEC11AQ9Y240 323 aa9.2□□□□□ -0.94
MSC-AS1-203ENST00000518700 RNF25Q96BH1 459 aaPredicted RBP9.19□□□□□ -0.94
MSC-AS1-203ENST00000518700 TSHZ2Q9NRE2 1034 aa9.19□□□□□ -0.94
MSC-AS1-203ENST00000518700 GSE1Q14687 1217 aa9.18□□□□□ -0.94
MSC-AS1-203ENST00000518700 AKT1S1Q96B36 256 aa9.18□□□□□ -0.94
MSC-AS1-203ENST00000518700 RBM42Q9BTD8 480 aaKnown RBP9.18□□□□□ -0.94
MSC-AS1-203ENST00000518700 DCAF8Q5TAQ9 597 aa9.16□□□□□ -0.94
MSC-AS1-203ENST00000518700 CREBZFQ9NS37 354 aa9.16□□□□□ -0.94
MSC-AS1-203ENST00000518700 HS6ST3Q8IZP7 471 aa9.15□□□□□ -0.94
MSC-AS1-203ENST00000518700 PRR29P0C7W0 189 aa9.14□□□□□ -0.95
MSC-AS1-203ENST00000518700 PRKCSHP14314 528 aaPredicted RBP9.14□□□□□ -0.95
MSC-AS1-203ENST00000518700 REM2Q8IYK8 340 aaPredicted RBP9.13□□□□□ -0.95
MSC-AS1-203ENST00000518700 MNX1P50219 401 aaPredicted RBP9.12□□□□□ -0.95
MSC-AS1-203ENST00000518700 TAOK2Q9UL54 1235 aa9.1□□□□□ -0.95
MSC-AS1-203ENST00000518700 RIOK3O14730 519 aaKnown RBP9.09□□□□□ -0.95
MSC-AS1-203ENST00000518700 FAM212AQ96EL1 285 aa9.09□□□□□ -0.95
MSC-AS1-203ENST00000518700 RASEFQ8IZ41 740 aa9.08□□□□□ -0.96
MSC-AS1-203ENST00000518700 NKX1-1Q15270 411 aaPredicted RBP9.06□□□□□ -0.96
MSC-AS1-203ENST00000518700 PITPNM1O00562 1244 aa9.04□□□□□ -0.96
MSC-AS1-203ENST00000518700 DNAJC5Q9H3Z4 198 aa9.04□□□□□ -0.96
MSC-AS1-203ENST00000518700 STK25O00506 426 aa9.03□□□□□ -0.96
MSC-AS1-203ENST00000518700 VGFO15240 615 aaPredicted RBP9.02□□□□□ -0.97
MSC-AS1-203ENST00000518700 UNC13AQ9UPW8 1703 aa9.02□□□□□ -0.97
MSC-AS1-203ENST00000518700 TPRNQ4KMQ1 711 aa9.01□□□□□ -0.97
MSC-AS1-203ENST00000518700 PYGBP11216 843 aa9□□□□□ -0.97
MSC-AS1-203ENST00000518700 SHROOM4Q9ULL8 1493 aa9□□□□□ -0.97
MSC-AS1-203ENST00000518700 GTPBP6O43824 516 aaPredicted RBP8.99□□□□□ -0.97
MSC-AS1-203ENST00000518700 CHRM1P11229 460 aaPredicted RBP8.99□□□□□ -0.97
MSC-AS1-203ENST00000518700 BICRAQ9NZM4 1560 aa8.99□□□□□ -0.97
MSC-AS1-203ENST00000518700 SCRIBQ14160 1630 aa8.98□□□□□ -0.97
MSC-AS1-203ENST00000518700 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.98□□□□□ -0.97
MSC-AS1-203ENST00000518700 ZFP91Q96JP5 570 aaPredicted RBP8.98□□□□□ -0.97
MSC-AS1-203ENST00000518700 STK24Q9Y6E0 443 aa8.97□□□□□ -0.97
MSC-AS1-203ENST00000518700 CHADLQ6NUI6 762 aa8.96□□□□□ -0.98
MSC-AS1-203ENST00000518700 BCL11BQ9C0K0 894 aaPredicted RBP8.96□□□□□ -0.98
MSC-AS1-203ENST00000518700 SGIP1Q9BQI5 828 aa8.93□□□□□ -0.98
MSC-AS1-203ENST00000518700 NBR1Q14596 966 aa8.91□□□□□ -0.98
MSC-AS1-203ENST00000518700 TSPYL2Q9H2G4 693 aaPredicted RBP8.91□□□□□ -0.98
MSC-AS1-203ENST00000518700 FARP1Q9Y4F1 1045 aaPredicted RBP8.86□□□□□ -0.99
MSC-AS1-203ENST00000518700 PCDHB8Q9UN66 801 aa8.83□□□□□ -1
MSC-AS1-203ENST00000518700 PCDHB13Q9Y5F0 798 aa8.83□□□□□ -1
MSC-AS1-203ENST00000518700 ZNF467Q7Z7K2 595 aaPredicted RBP8.82□□□□□ -1
MSC-AS1-203ENST00000518700 RYDENQ9NUL5 291 aaKnown RBP8.82□□□□□ -1
MSC-AS1-203ENST00000518700 PRKAR2AP13861 404 aaKnown RBP8.81□□□□□ -1
MSC-AS1-203ENST00000518700 PDAP1Q13442 181 aaKnown RBP8.79□□□□□ -1
MSC-AS1-203ENST00000518700 CCDC61Q9Y6R9 512 aa8.78□□□□□ -1
MSC-AS1-203ENST00000518700 CADPS2Q86UW7 1296 aa8.77□□□□□ -1.01
MSC-AS1-203ENST00000518700 EIF4G1Q04637 1599 aaKnown RBP8.77□□□□□ -1.01
MSC-AS1-203ENST00000518700 PSEN1P49768 467 aa8.76□□□□□ -1.01
MSC-AS1-203ENST00000518700 FXR2P51116 673 aaKnown RBP eCLIP8.74□□□□□ -1.01
MSC-AS1-203ENST00000518700 ZNF579Q8NAF0 562 aaKnown RBP8.74□□□□□ -1.01
MSC-AS1-203ENST00000518700 MFRPQ9BY79 579 aa8.73□□□□□ -1.01
MSC-AS1-203ENST00000518700 CC2D2AQ9P2K1 1620 aa8.72□□□□□ -1.01
MSC-AS1-203ENST00000518700 IFNL1Q8IU54 200 aa8.71□□□□□ -1.02
MSC-AS1-203ENST00000518700 CECR2Q9BXF3 1484 aa8.7□□□□□ -1.02
MSC-AS1-203ENST00000518700 MAP3K13O43283 966 aa8.69□□□□□ -1.02
MSC-AS1-203ENST00000518700 PAK3O75914 559 aaPredicted RBP8.69□□□□□ -1.02
MSC-AS1-203ENST00000518700 KCNV2Q8TDN2 545 aa8.69□□□□□ -1.02
MSC-AS1-203ENST00000518700 P3H3Q8IVL6 736 aa8.68□□□□□ -1.02
MSC-AS1-203ENST00000518700 PPP1R37O75864 691 aa8.67□□□□□ -1.02
MSC-AS1-203ENST00000518700 PIP4P2Q8N4L2 257 aa8.67□□□□□ -1.02
MSC-AS1-203ENST00000518700 EFCAB3Q8N7B9 438 aa8.67□□□□□ -1.02
MSC-AS1-203ENST00000518700 CABP2Q9NPB3 220 aa8.67□□□□□ -1.02
MSC-AS1-203ENST00000518700 BAZ1AQ9NRL2 1556 aaPredicted RBP8.67□□□□□ -1.02
MSC-AS1-203ENST00000518700 WDR70Q9NW82 654 aa8.67□□□□□ -1.02
MSC-AS1-203ENST00000518700 KIF12Q96FN5 646 aa8.66□□□□□ -1.02
MSC-AS1-203ENST00000518700 CHRDL2Q6WN34 429 aa8.65□□□□□ -1.02
MSC-AS1-203ENST00000518700 PHF8Q9UPP1 1060 aa8.65□□□□□ -1.02
MSC-AS1-203ENST00000518700 NCAPD3P42695 1498 aa8.64□□□□□ -1.03
MSC-AS1-203ENST00000518700 FBXO22Q8NEZ5 403 aa8.64□□□□□ -1.03
MSC-AS1-203ENST00000518700 SMARCA2P51531 1590 aa8.63□□□□□ -1.03
MSC-AS1-203ENST00000518700 SMARCA4P51532 1647 aa8.62□□□□□ -1.03
MSC-AS1-203ENST00000518700 ATAD2BQ9ULI0 1458 aa8.62□□□□□ -1.03
MSC-AS1-203ENST00000518700 NLRP6P59044 892 aa8.61□□□□□ -1.03
MSC-AS1-203ENST00000518700 PHF12Q96QT6 1004 aa8.61□□□□□ -1.03
MSC-AS1-203ENST00000518700 ZRANB1Q9UGI0 708 aa8.61□□□□□ -1.03
MSC-AS1-203ENST00000518700 SOX12O15370 315 aa8.59□□□□□ -1.03
MSC-AS1-203ENST00000518700 MROH2BQ7Z745 1585 aa8.58□□□□□ -1.04
MSC-AS1-203ENST00000518700 CD44P16070 742 aaKnown RBP8.58□□□□□ -1.04
MSC-AS1-203ENST00000518700 PEG3Q9GZU2 1588 aa8.57□□□□□ -1.04
MSC-AS1-203ENST00000518700 LMOD2Q6P5Q4 547 aa8.57□□□□□ -1.04
MSC-AS1-203ENST00000518700 HMGXB3Q12766 1538 aa8.55□□□□□ -1.04
MSC-AS1-203ENST00000518700 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.55□□□□□ -1.04
MSC-AS1-203ENST00000518700 MS4A4AQ96JQ5 239 aa8.55□□□□□ -1.04
MSC-AS1-203ENST00000518700 BAZ1BQ9UIG0 1483 aaKnown RBP8.55□□□□□ -1.04
MSC-AS1-203ENST00000518700 RSF1Q96T23 1441 aaPredicted RBP8.54□□□□□ -1.04
MSC-AS1-203ENST00000518700 E2F4Q16254 413 aa8.53□□□□□ -1.04
MSC-AS1-203ENST00000518700 TRPC6Q9Y210 931 aa8.53□□□□□ -1.04
MSC-AS1-203ENST00000518700 NCKAP5LQ9HCH0 1330 aa8.53□□□□□ -1.04
MSC-AS1-203ENST00000518700 TMEM106CQ9BVX2 250 aa8.52□□□□□ -1.05
MSC-AS1-203ENST00000518700 ARHGEF1Q92888 912 aaKnown RBP8.51□□□□□ -1.05
MSC-AS1-203ENST00000518700 MS4A3Q96HJ5 214 aa8.51□□□□□ -1.05
MSC-AS1-203ENST00000518700 GOLGA2Q08379 1002 aa8.49□□□□□ -1.05
MSC-AS1-203ENST00000518700 LARP6Q9BRS8 491 aaKnown RBP8.49□□□□□ -1.05
MSC-AS1-203ENST00000518700 SEMA3EO15041 775 aa8.48□□□□□ -1.05
MSC-AS1-203ENST00000518700 TULP1O00294 542 aaPredicted RBP8.46□□□□□ -1.06
MSC-AS1-203ENST00000518700 PDE4AP27815 886 aa8.46□□□□□ -1.06
MSC-AS1-203ENST00000518700 CRISPLD2Q9H0B8 497 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms