RNA–Protein interactions for RNA: ENST00000518585.1

CTNNA1-209, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-209ENST00000518585 POTEMA6NI47 508 aa10.96□□□□□ -0.65
CTNNA1-209ENST00000518585 C7P10643 843 aa10.95□□□□□ -0.66
CTNNA1-209ENST00000518585 ATMINO43313 823 aaPredicted RBP10.94□□□□□ -0.66
CTNNA1-209ENST00000518585 TSPYL2Q9H2G4 693 aaPredicted RBP10.94□□□□□ -0.66
CTNNA1-209ENST00000518585 POTEGQ6S5H5 508 aa10.92□□□□□ -0.66
CTNNA1-209ENST00000518585 MAMSTRQ6ZN01 415 aa10.92□□□□□ -0.66
CTNNA1-209ENST00000518585 PLEKHG5O94827 1062 aa10.89□□□□□ -0.67
CTNNA1-209ENST00000518585 CCDC61Q9Y6R9 512 aa10.87□□□□□ -0.67
CTNNA1-209ENST00000518585 PROM2Q8N271 834 aa10.85□□□□□ -0.67
CTNNA1-209ENST00000518585 SCUBE2Q9NQ36 999 aa10.85□□□□□ -0.67
CTNNA1-209ENST00000518585 ATN1P54259 1190 aaPredicted RBP10.84□□□□□ -0.67
CTNNA1-209ENST00000518585 PCDH10Q9P2E7 1040 aa10.83□□□□□ -0.68
CTNNA1-209ENST00000518585 POTEJP0CG39 1038 aa10.81□□□□□ -0.68
CTNNA1-209ENST00000518585 KIF12Q96FN5 646 aa10.81□□□□□ -0.68
CTNNA1-209ENST00000518585 MIER1Q8N108 512 aa10.78□□□□□ -0.68
CTNNA1-209ENST00000518585 BMP2KQ9NSY1 1161 aaPredicted RBP10.77□□□□□ -0.69
CTNNA1-209ENST00000518585 TIE1P35590 1138 aa10.76□□□□□ -0.69
CTNNA1-209ENST00000518585 MAP3K13O43283 966 aa10.75□□□□□ -0.69
CTNNA1-209ENST00000518585 FAM163AQ96GL9 167 aaPredicted RBP10.75□□□□□ -0.69
CTNNA1-209ENST00000518585 TRPC6Q9Y210 931 aa10.72□□□□□ -0.69
CTNNA1-209ENST00000518585 SEC24BO95487 1268 aa10.71□□□□□ -0.69
CTNNA1-209ENST00000518585 RASEFQ8IZ41 740 aa10.71□□□□□ -0.69
CTNNA1-209ENST00000518585 POTEFA5A3E0 1075 aa10.69□□□□□ -0.7
CTNNA1-209ENST00000518585 PLCD3Q8N3E9 789 aa10.69□□□□□ -0.7
CTNNA1-209ENST00000518585 TTLL13PA6NNM8 815 aa10.67□□□□□ -0.7
CTNNA1-209ENST00000518585 LCE2DQ5TA82 110 aaPredicted RBP10.67□□□□□ -0.7
CTNNA1-209ENST00000518585 ZBTB47Q9UFB7 747 aaPredicted RBP10.66□□□□□ -0.7
CTNNA1-209ENST00000518585 SGIP1Q9BQI5 828 aa10.65□□□□□ -0.7
CTNNA1-209ENST00000518585 PCDHB13Q9Y5F0 798 aa10.64□□□□□ -0.71
CTNNA1-209ENST00000518585 IER5LQ5T953 404 aa10.63□□□□□ -0.71
CTNNA1-209ENST00000518585 TRIM35Q9UPQ4 493 aa10.62□□□□□ -0.71
CTNNA1-209ENST00000518585 COLQQ9Y215 455 aaPredicted RBP10.62□□□□□ -0.71
CTNNA1-209ENST00000518585 FAM212AQ96EL1 285 aa10.56□□□□□ -0.72
CTNNA1-209ENST00000518585 NUBP1P53384 320 aa10.53□□□□□ -0.72
CTNNA1-209ENST00000518585 IFNL1Q8IU54 200 aa10.53□□□□□ -0.72
CTNNA1-209ENST00000518585 SLAIN1Q8ND83 568 aa10.53□□□□□ -0.72
CTNNA1-209ENST00000518585 PLCG2P16885 1265 aa10.52□□□□□ -0.73
CTNNA1-209ENST00000518585 CDAN1Q8IWY9 1227 aa10.52□□□□□ -0.73
CTNNA1-209ENST00000518585 TMEM106CQ9BVX2 250 aa10.52□□□□□ -0.73
CTNNA1-209ENST00000518585 ST18O60284 1047 aa10.45□□□□□ -0.74
CTNNA1-209ENST00000518585 IRX5P78411 483 aaPredicted RBP10.42□□□□□ -0.74
CTNNA1-209ENST00000518585 DCAF8Q5TAQ9 597 aa10.41□□□□□ -0.74
CTNNA1-209ENST00000518585 OCEL1Q9H607 264 aa10.39□□□□□ -0.75
CTNNA1-209ENST00000518585 SNPHO15079 494 aa10.38□□□□□ -0.75
CTNNA1-209ENST00000518585 PYGBP11216 843 aa10.38□□□□□ -0.75
CTNNA1-209ENST00000518585 FKBP8Q14318 412 aa10.38□□□□□ -0.75
CTNNA1-209ENST00000518585 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.37□□□□□ -0.75
CTNNA1-209ENST00000518585 TMEM121BQ9BXQ6 578 aaPredicted RBP10.36□□□□□ -0.75
CTNNA1-209ENST00000518585 PCDHB8Q9UN66 801 aa10.32□□□□□ -0.76
CTNNA1-209ENST00000518585 FBXO3Q9UK99 471 aa10.31□□□□□ -0.76
CTNNA1-209ENST00000518585 GOLGA2Q08379 1002 aa10.3□□□□□ -0.76
CTNNA1-209ENST00000518585 C3orf67Q6ZVT6 689 aa10.27□□□□□ -0.77
CTNNA1-209ENST00000518585 ZNF467Q7Z7K2 595 aaPredicted RBP10.27□□□□□ -0.77
CTNNA1-209ENST00000518585 MKRN3Q13064 507 aaKnown RBP10.25□□□□□ -0.77
CTNNA1-209ENST00000518585 MMRN1Q13201 1228 aa10.25□□□□□ -0.77
CTNNA1-209ENST00000518585 GSE1Q14687 1217 aa10.25□□□□□ -0.77
CTNNA1-209ENST00000518585 MARVELD3Q96A59 401 aa10.25□□□□□ -0.77
CTNNA1-209ENST00000518585 SPNS2Q8IVW8 549 aa10.24□□□□□ -0.77
CTNNA1-209ENST00000518585 L3MBTL3Q96JM7 780 aaPredicted RBP10.24□□□□□ -0.77
CTNNA1-209ENST00000518585 KLHL34Q8N239 644 aa10.23□□□□□ -0.77
CTNNA1-209ENST00000518585 PDCD7Q8N8D1 485 aaKnown RBP10.21□□□□□ -0.77
CTNNA1-209ENST00000518585 EMP3P54852 163 aa10.2□□□□□ -0.78
CTNNA1-209ENST00000518585 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.18□□□□□ -0.785e-9■□□□□ 10.9
CTNNA1-209ENST00000518585 PSEN1P49768 467 aa10.14□□□□□ -0.79
CTNNA1-209ENST00000518585 VASPP50552 380 aaPredicted RBP10.14□□□□□ -0.79
CTNNA1-209ENST00000518585 CHRM1P11229 460 aaPredicted RBP10.13□□□□□ -0.79
CTNNA1-209ENST00000518585 G3V3G9 751 aa10.12□□□□□ -0.79
CTNNA1-209ENST00000518585 FAM205CA6NFA0 338 aa10.1□□□□□ -0.79
CTNNA1-209ENST00000518585 HS3ST6Q96QI5 342 aa10.1□□□□□ -0.79
CTNNA1-209ENST00000518585 PDAP1Q13442 181 aaKnown RBP10.09□□□□□ -0.79
CTNNA1-209ENST00000518585 KRTAP3-3Q9BYR6 98 aa10.04□□□□□ -0.8
CTNNA1-209ENST00000518585 KRTAP3-2Q9BYR7 98 aa10.04□□□□□ -0.8
CTNNA1-209ENST00000518585 CABP2Q9NPB3 220 aa10.04□□□□□ -0.8
CTNNA1-209ENST00000518585 ILDR1Q86SU0 546 aaPredicted RBP10.03□□□□□ -0.8
CTNNA1-209ENST00000518585 BOLA1Q9Y3E2 137 aa10.02□□□□□ -0.81
CTNNA1-209ENST00000518585 POTEB3A0JP26 581 aa10.01□□□□□ -0.81
CTNNA1-209ENST00000518585 DPY19L2Q6NUT2 758 aa10.01□□□□□ -0.81
CTNNA1-209ENST00000518585 POTEBQ6S5H4 581 aa10.01□□□□□ -0.81
CTNNA1-209ENST00000518585 ZNF710Q8N1W2 664 aa10.01□□□□□ -0.81
CTNNA1-209ENST00000518585 CIZ1Q9ULV3 898 aaPredicted RBP10.01□□□□□ -0.81
CTNNA1-209ENST00000518585 DOK7Q18PE1 504 aa9.98□□□□□ -0.81
CTNNA1-209ENST00000518585 SPOCK2Q92563 424 aa9.98□□□□□ -0.81
CTNNA1-209ENST00000518585 HOXB3P14651 431 aaPredicted RBP9.96□□□□□ -0.82
CTNNA1-209ENST00000518585 HOXB1P14653 301 aaPredicted RBP9.95□□□□□ -0.82
CTNNA1-209ENST00000518585 ERBB3P21860 1342 aa9.94□□□□□ -0.82
CTNNA1-209ENST00000518585 RIMBP2O15034 1052 aa9.94□□□□□ -0.82
CTNNA1-209ENST00000518585 IFNLR1Q8IU57 520 aaPredicted RBP9.89□□□□□ -0.83
CTNNA1-209ENST00000518585 EFCAB3Q8N7B9 438 aa9.87□□□□□ -0.83
CTNNA1-209ENST00000518585 RNF166Q96A37 237 aaPredicted RBP9.87□□□□□ -0.83
CTNNA1-209ENST00000518585 TRIM41Q8WV44 630 aa9.86□□□□□ -0.83
CTNNA1-209ENST00000518585 VARS2Q5ST30 1063 aaKnown RBP9.85□□□□□ -0.83
CTNNA1-209ENST00000518585 ZSWIM6Q9HCJ5 1215 aa9.83□□□□□ -0.84
CTNNA1-209ENST00000518585 MICALL2Q8IY33 904 aa9.81□□□□□ -0.84
CTNNA1-209ENST00000518585 MYT1LQ9UL68 1186 aa9.81□□□□□ -0.84
CTNNA1-209ENST00000518585 ZNF687Q8N1G0 1237 aa9.78□□□□□ -0.84
CTNNA1-209ENST00000518585 SOX12O15370 315 aa9.77□□□□□ -0.85
CTNNA1-209ENST00000518585 PTGER2P43116 358 aa9.76□□□□□ -0.85
CTNNA1-209ENST00000518585 TMEM92Q6UXU6 159 aa9.75□□□□□ -0.85
CTNNA1-209ENST00000518585 GPR153Q6NV75 609 aa9.73□□□□□ -0.85
CTNNA1-209ENST00000518585 RIOK3O14730 519 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms