RNA–Protein interactions for RNA: ENST00000518495.5

VDAC3-202, Transcript of voltage dependent anion channel 3, humanhuman

TSL 3

Gene VDAC3, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-202ENST00000518495 PIP4P2Q8N4L2 257 aa8.71□□□□□ -1.02
VDAC3-202ENST00000518495 TPRNQ4KMQ1 711 aa8.7□□□□□ -1.02
VDAC3-202ENST00000518495 EIF5BO60841 1220 aaKnown RBP8.69□□□□□ -1.02
VDAC3-202ENST00000518495 PLCB2Q00722 1185 aa8.69□□□□□ -1.02
VDAC3-202ENST00000518495 NPM1P06748 294 aaKnown RBP eCLIP8.67□□□□□ -1.02
VDAC3-202ENST00000518495 GTF3C3Q9Y5Q9 886 aa8.67□□□□□ -1.02
VDAC3-202ENST00000518495 NUBP1P53384 320 aa8.66□□□□□ -1.02
VDAC3-202ENST00000518495 FARP1Q9Y4F1 1045 aaPredicted RBP8.66□□□□□ -1.02
VDAC3-202ENST00000518495 PODXL2Q9NZ53 605 aa8.65□□□□□ -1.02
VDAC3-202ENST00000518495 PKD2Q13563 968 aa8.63□□□□□ -1.03
VDAC3-202ENST00000518495 CIZ1Q9ULV3 898 aaPredicted RBP8.61□□□□□ -1.03
VDAC3-202ENST00000518495 DCAF8Q5TAQ9 597 aa8.59□□□□□ -1.03
VDAC3-202ENST00000518495 RASEFQ8IZ41 740 aa8.59□□□□□ -1.03
VDAC3-202ENST00000518495 GSE1Q14687 1217 aa8.58□□□□□ -1.04
VDAC3-202ENST00000518495 FAM212AQ96EL1 285 aa8.58□□□□□ -1.04
VDAC3-202ENST00000518495 ECM2O94769 699 aaPredicted RBP8.55□□□□□ -1.04
VDAC3-202ENST00000518495 HAP1P54257 671 aaPredicted RBP8.54□□□□□ -1.04
VDAC3-202ENST00000518495 NPM2Q86SE8 214 aaKnown RBP8.53□□□□□ -1.04
VDAC3-202ENST00000518495 TSPYL2Q9H2G4 693 aaPredicted RBP8.53□□□□□ -1.04
VDAC3-202ENST00000518495 VSIG10Q8N0Z9 540 aa8.52□□□□□ -1.05
VDAC3-202ENST00000518495 TRIM41Q8WV44 630 aa8.52□□□□□ -1.05
VDAC3-202ENST00000518495 PAK3O75914 559 aaPredicted RBP8.48□□□□□ -1.05
VDAC3-202ENST00000518495 RGL2O15211 777 aa8.47□□□□□ -1.05
VDAC3-202ENST00000518495 DCAF8L2P0C7V8 631 aa8.47□□□□□ -1.05
VDAC3-202ENST00000518495 CHRM1P11229 460 aaPredicted RBP8.47□□□□□ -1.05
VDAC3-202ENST00000518495 CD44P16070 742 aaKnown RBP8.46□□□□□ -1.06
VDAC3-202ENST00000518495 TMEM132AQ24JP5 1023 aa8.46□□□□□ -1.06
VDAC3-202ENST00000518495 POTEHQ6S545 545 aa8.46□□□□□ -1.06
VDAC3-202ENST00000518495 C19orf67A6NJJ6 358 aa8.45□□□□□ -1.06
VDAC3-202ENST00000518495 PYGBP11216 843 aa8.45□□□□□ -1.06
VDAC3-202ENST00000518495 CCDC61Q9Y6R9 512 aa8.45□□□□□ -1.06
VDAC3-202ENST00000518495 ZRANB1Q9UGI0 708 aa8.44□□□□□ -1.06
VDAC3-202ENST00000518495 C14orf37Q86TY3 774 aa8.43□□□□□ -1.06
VDAC3-202ENST00000518495 HAX1O00165 279 aa8.41□□□□□ -1.06
VDAC3-202ENST00000518495 RNF25Q96BH1 459 aaPredicted RBP8.41□□□□□ -1.06
VDAC3-202ENST00000518495 RIOK3O14730 519 aaKnown RBP8.39□□□□□ -1.07
VDAC3-202ENST00000518495 KIF12Q96FN5 646 aa8.37□□□□□ -1.07
VDAC3-202ENST00000518495 ZNF579Q8NAF0 562 aaKnown RBP8.36□□□□□ -1.07
VDAC3-202ENST00000518495 PHF12Q96QT6 1004 aa8.36□□□□□ -1.07
VDAC3-202ENST00000518495 MAP3K13O43283 966 aa8.35□□□□□ -1.07
VDAC3-202ENST00000518495 EVX2Q03828 476 aa8.35□□□□□ -1.07
VDAC3-202ENST00000518495 ZNF467Q7Z7K2 595 aaPredicted RBP8.34□□□□□ -1.07
VDAC3-202ENST00000518495 SGIP1Q9BQI5 828 aa8.34□□□□□ -1.07
VDAC3-202ENST00000518495 PCDHB13Q9Y5F0 798 aa8.34□□□□□ -1.07
VDAC3-202ENST00000518495 VGFO15240 615 aaPredicted RBP8.33□□□□□ -1.08
VDAC3-202ENST00000518495 PCDHB8Q9UN66 801 aa8.33□□□□□ -1.08
VDAC3-202ENST00000518495 CHGAP10645 457 aaKnown RBP8.32□□□□□ -1.08
VDAC3-202ENST00000518495 IFNL1Q8IU54 200 aa8.31□□□□□ -1.08
VDAC3-202ENST00000518495 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.28□□□□□ -1.08
VDAC3-202ENST00000518495 PDAP1Q13442 181 aaKnown RBP8.28□□□□□ -1.08
VDAC3-202ENST00000518495 HS6ST3Q8IZP7 471 aa8.28□□□□□ -1.08
VDAC3-202ENST00000518495 ZFP91Q96JP5 570 aaPredicted RBP8.28□□□□□ -1.08
VDAC3-202ENST00000518495 STK25O00506 426 aa8.27□□□□□ -1.09
VDAC3-202ENST00000518495 PSEN1P49768 467 aa8.26□□□□□ -1.09
VDAC3-202ENST00000518495 CLCN6P51797 869 aa8.26□□□□□ -1.09
VDAC3-202ENST00000518495 BBXQ8WY36 941 aaPredicted RBP8.26□□□□□ -1.09
VDAC3-202ENST00000518495 MS4A3Q96HJ5 214 aa8.26□□□□□ -1.09
VDAC3-202ENST00000518495 BCL11BQ9C0K0 894 aaPredicted RBP8.25□□□□□ -1.09
VDAC3-202ENST00000518495 STK24Q9Y6E0 443 aa8.24□□□□□ -1.09
VDAC3-202ENST00000518495 GALR2O43603 387 aaPredicted RBP8.22□□□□□ -1.09
VDAC3-202ENST00000518495 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.22□□□□□ -1.09
VDAC3-202ENST00000518495 CDK11AQ9UQ88 783 aaPredicted RBP8.22□□□□□ -1.09
VDAC3-202ENST00000518495 HMGB1P09429 215 aaKnown RBP8.21□□□□□ -1.1
VDAC3-202ENST00000518495 DNAJC5Q9H3Z4 198 aa8.21□□□□□ -1.1
VDAC3-202ENST00000518495 TRPC6Q9Y210 931 aa8.21□□□□□ -1.1
VDAC3-202ENST00000518495 GABBR2O75899 941 aa8.19□□□□□ -1.1
VDAC3-202ENST00000518495 TRIM26Q12899 539 aaPredicted RBP8.19□□□□□ -1.1
VDAC3-202ENST00000518495 TMEM106CQ9BVX2 250 aa8.18□□□□□ -1.1
VDAC3-202ENST00000518495 NKX1-1Q15270 411 aaPredicted RBP8.17□□□□□ -1.1
VDAC3-202ENST00000518495 TIE1P35590 1138 aa8.16□□□□□ -1.1
VDAC3-202ENST00000518495 PAXIP1Q6ZW49 1069 aaPredicted RBP8.15□□□□□ -1.1
VDAC3-202ENST00000518495 SPRYD3Q8NCJ5 442 aa8.15□□□□□ -1.1
VDAC3-202ENST00000518495 CABP2Q9NPB3 220 aa8.15□□□□□ -1.1
VDAC3-202ENST00000518495 BMP2KQ9NSY1 1161 aaPredicted RBP8.15□□□□□ -1.1
VDAC3-202ENST00000518495 TTLL13PA6NNM8 815 aa8.14□□□□□ -1.11
VDAC3-202ENST00000518495 SP7Q8TDD2 431 aaPredicted RBP8.14□□□□□ -1.11
VDAC3-202ENST00000518495 CFAP44Q96MT7 982 aa8.14□□□□□ -1.11
VDAC3-202ENST00000518495 KDM2AQ9Y2K7 1162 aa8.13□□□□□ -1.11
VDAC3-202ENST00000518495 EFCAB3Q8N7B9 438 aa8.12□□□□□ -1.11
VDAC3-202ENST00000518495 GOLGA2Q08379 1002 aa8.11□□□□□ -1.11
VDAC3-202ENST00000518495 GTPBP6O43824 516 aaPredicted RBP8.1□□□□□ -1.11
VDAC3-202ENST00000518495 CDK11BP21127 795 aaKnown RBP8.1□□□□□ -1.11
VDAC3-202ENST00000518495 SUPT5HO00267 1087 aaKnown RBP8.09□□□□□ -1.11
VDAC3-202ENST00000518495 SOX12O15370 315 aa8.09□□□□□ -1.11
VDAC3-202ENST00000518495 ATMINO43313 823 aaPredicted RBP8.09□□□□□ -1.11
VDAC3-202ENST00000518495 ATN1P54259 1190 aaPredicted RBP8.09□□□□□ -1.11
VDAC3-202ENST00000518495 ASTLQ6HA08 431 aaPredicted RBP8.09□□□□□ -1.11
VDAC3-202ENST00000518495 DCBLD2Q96PD2 775 aa8.09□□□□□ -1.11
VDAC3-202ENST00000518495 TRIM35Q9UPQ4 493 aa8.09□□□□□ -1.11
VDAC3-202ENST00000518495 MKRN3Q13064 507 aaKnown RBP8.08□□□□□ -1.12
VDAC3-202ENST00000518495 MFRPQ9BY79 579 aa8.08□□□□□ -1.12
VDAC3-202ENST00000518495 RYDENQ9NUL5 291 aaKnown RBP8.08□□□□□ -1.12
VDAC3-202ENST00000518495 SHROOM4Q9ULL8 1493 aa8.06□□□□□ -1.12
VDAC3-202ENST00000518495 PHF8Q9UPP1 1060 aa8.06□□□□□ -1.12
VDAC3-202ENST00000518495 HRCP23327 699 aa8.05□□□□□ -1.12
VDAC3-202ENST00000518495 NLRP6P59044 892 aa8.05□□□□□ -1.12
VDAC3-202ENST00000518495 CCDC9Q9Y3X0 531 aaKnown RBP8.05□□□□□ -1.12
VDAC3-202ENST00000518495 PDIA4P13667 645 aaKnown RBP8.04□□□□□ -1.12
VDAC3-202ENST00000518495 UBTFP17480 764 aaKnown RBP8.04□□□□□ -1.12
VDAC3-202ENST00000518495 NBR1Q14596 966 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms