RNA–Protein interactions for RNA: ENST00000518436.5

LINC01339-202, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 3

Gene LINC01339, Length 375 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-202ENST00000518436 HAX1O00165 279 aa10.16□□□□□ -0.78
LINC01339-202ENST00000518436 PKD2Q13563 968 aa10.16□□□□□ -0.78
LINC01339-202ENST00000518436 TRIM41Q8WV44 630 aa10.14□□□□□ -0.79
LINC01339-202ENST00000518436 ZRANB1Q9UGI0 708 aa10.13□□□□□ -0.79
LINC01339-202ENST00000518436 CCDC61Q9Y6R9 512 aa10.12□□□□□ -0.79
LINC01339-202ENST00000518436 ECM2O94769 699 aaPredicted RBP10.1□□□□□ -0.79
LINC01339-202ENST00000518436 PYGBP11216 843 aa10.07□□□□□ -0.8
LINC01339-202ENST00000518436 CHRM1P11229 460 aaPredicted RBP10.07□□□□□ -0.8
LINC01339-202ENST00000518436 EVX2Q03828 476 aa10.07□□□□□ -0.8
LINC01339-202ENST00000518436 ZNF579Q8NAF0 562 aaKnown RBP10.07□□□□□ -0.8
LINC01339-202ENST00000518436 PHF12Q96QT6 1004 aa10.03□□□□□ -0.8
LINC01339-202ENST00000518436 KIF12Q96FN5 646 aa10.02□□□□□ -0.81
LINC01339-202ENST00000518436 RGL2O15211 777 aa9.99□□□□□ -0.81
LINC01339-202ENST00000518436 SGIP1Q9BQI5 828 aa9.99□□□□□ -0.81
LINC01339-202ENST00000518436 MAP3K13O43283 966 aa9.98□□□□□ -0.81
LINC01339-202ENST00000518436 RNF25Q96BH1 459 aaPredicted RBP9.97□□□□□ -0.81
LINC01339-202ENST00000518436 PCDHB13Q9Y5F0 798 aa9.97□□□□□ -0.81
LINC01339-202ENST00000518436 CLCN6P51797 869 aa9.96□□□□□ -0.82
LINC01339-202ENST00000518436 ZNF467Q7Z7K2 595 aaPredicted RBP9.96□□□□□ -0.82
LINC01339-202ENST00000518436 RIOK3O14730 519 aaKnown RBP9.95□□□□□ -0.82
LINC01339-202ENST00000518436 IFNL1Q8IU54 200 aa9.93□□□□□ -0.82
LINC01339-202ENST00000518436 MS4A3Q96HJ5 214 aa9.92□□□□□ -0.82
LINC01339-202ENST00000518436 PCDHB8Q9UN66 801 aa9.92□□□□□ -0.82
LINC01339-202ENST00000518436 TAOK2Q9UL54 1235 aa9.91□□□□□ -0.82
LINC01339-202ENST00000518436 DCAF8L2P0C7V8 631 aa9.9□□□□□ -0.82
LINC01339-202ENST00000518436 SP7Q8TDD2 431 aaPredicted RBP9.9□□□□□ -0.82
LINC01339-202ENST00000518436 VGFO15240 615 aaPredicted RBP9.89□□□□□ -0.83
LINC01339-202ENST00000518436 GABBR2O75899 941 aa9.89□□□□□ -0.83
LINC01339-202ENST00000518436 GALR2O43603 387 aaPredicted RBP9.88□□□□□ -0.83
LINC01339-202ENST00000518436 PDAP1Q13442 181 aaKnown RBP9.87□□□□□ -0.83
LINC01339-202ENST00000518436 PSEN1P49768 467 aa9.84□□□□□ -0.83
LINC01339-202ENST00000518436 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.83□□□□□ -0.84
LINC01339-202ENST00000518436 ZFP91Q96JP5 570 aaPredicted RBP9.83□□□□□ -0.84
LINC01339-202ENST00000518436 TRPC6Q9Y210 931 aa9.83□□□□□ -0.84
LINC01339-202ENST00000518436 TIE1P35590 1138 aa9.81□□□□□ -0.84
LINC01339-202ENST00000518436 STK25O00506 426 aa9.8□□□□□ -0.84
LINC01339-202ENST00000518436 CHGAP10645 457 aaKnown RBP9.8□□□□□ -0.84
LINC01339-202ENST00000518436 HS6ST3Q8IZP7 471 aa9.79□□□□□ -0.84
LINC01339-202ENST00000518436 TMEM106CQ9BVX2 250 aa9.78□□□□□ -0.84
LINC01339-202ENST00000518436 BCL11BQ9C0K0 894 aaPredicted RBP9.78□□□□□ -0.84
LINC01339-202ENST00000518436 BMP2KQ9NSY1 1161 aaPredicted RBP9.78□□□□□ -0.84
LINC01339-202ENST00000518436 TTLL13PA6NNM8 815 aa9.76□□□□□ -0.85
LINC01339-202ENST00000518436 STK24Q9Y6E0 443 aa9.76□□□□□ -0.85
LINC01339-202ENST00000518436 DCBLD2Q96PD2 775 aa9.75□□□□□ -0.85
LINC01339-202ENST00000518436 ATMINO43313 823 aaPredicted RBP9.73□□□□□ -0.85
LINC01339-202ENST00000518436 ASTLQ6HA08 431 aaPredicted RBP9.73□□□□□ -0.85
LINC01339-202ENST00000518436 DNAJC5Q9H3Z4 198 aa9.72□□□□□ -0.85
LINC01339-202ENST00000518436 CABP2Q9NPB3 220 aa9.71□□□□□ -0.86
LINC01339-202ENST00000518436 ATN1P54259 1190 aaPredicted RBP9.7□□□□□ -0.86
LINC01339-202ENST00000518436 BBXQ8WY36 941 aaPredicted RBP9.7□□□□□ -0.86
LINC01339-202ENST00000518436 TRIM35Q9UPQ4 493 aa9.7□□□□□ -0.86
LINC01339-202ENST00000518436 POTEIP0CG38 1075 aa9.68□□□□□ -0.86
LINC01339-202ENST00000518436 GOLGA2Q08379 1002 aa9.68□□□□□ -0.86
LINC01339-202ENST00000518436 EFCAB3Q8N7B9 438 aa9.66□□□□□ -0.86
LINC01339-202ENST00000518436 MKRN3Q13064 507 aaKnown RBP9.65□□□□□ -0.86
LINC01339-202ENST00000518436 NKX1-1Q15270 411 aaPredicted RBP9.65□□□□□ -0.86
LINC01339-202ENST00000518436 PELP1Q8IZL8 1130 aaKnown RBP9.64□□□□□ -0.87
LINC01339-202ENST00000518436 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.64□□□□□ -0.87
LINC01339-202ENST00000518436 SOX12O15370 315 aa9.63□□□□□ -0.87
LINC01339-202ENST00000518436 IER5LQ5T953 404 aa9.62□□□□□ -0.87
LINC01339-202ENST00000518436 SLC39A7Q92504 469 aa9.6□□□□□ -0.87
LINC01339-202ENST00000518436 MFRPQ9BY79 579 aa9.6□□□□□ -0.87
LINC01339-202ENST00000518436 PHF8Q9UPP1 1060 aa9.59□□□□□ -0.87
LINC01339-202ENST00000518436 C7P10643 843 aa9.58□□□□□ -0.88
LINC01339-202ENST00000518436 NLRP6P59044 892 aa9.58□□□□□ -0.88
LINC01339-202ENST00000518436 RYDENQ9NUL5 291 aaKnown RBP9.58□□□□□ -0.88
LINC01339-202ENST00000518436 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.58□□□□□ -0.88
LINC01339-202ENST00000518436 IRX5P78411 483 aaPredicted RBP9.57□□□□□ -0.88
LINC01339-202ENST00000518436 ILDR1Q86SU0 546 aaPredicted RBP9.57□□□□□ -0.88
LINC01339-202ENST00000518436 GTPBP6O43824 516 aaPredicted RBP9.56□□□□□ -0.88
LINC01339-202ENST00000518436 SPRYD3Q8NCJ5 442 aa9.56□□□□□ -0.88
LINC01339-202ENST00000518436 FBXO22Q8NEZ5 403 aa9.56□□□□□ -0.88
LINC01339-202ENST00000518436 METRNQ9UJH8 293 aa9.56□□□□□ -0.88
LINC01339-202ENST00000518436 PAXIP1Q6ZW49 1069 aaPredicted RBP9.55□□□□□ -0.88
LINC01339-202ENST00000518436 OCEL1Q9H607 264 aa9.55□□□□□ -0.88
LINC01339-202ENST00000518436 SEC24BO95487 1268 aa9.53□□□□□ -0.88
LINC01339-202ENST00000518436 PLCG2P16885 1265 aa9.53□□□□□ -0.88
LINC01339-202ENST00000518436 PLCB2Q00722 1185 aa9.53□□□□□ -0.88
LINC01339-202ENST00000518436 CFAP44Q96MT7 982 aa9.53□□□□□ -0.88
LINC01339-202ENST00000518436 PDCD7Q8N8D1 485 aaKnown RBP9.52□□□□□ -0.89
LINC01339-202ENST00000518436 MS4A4AQ96JQ5 239 aa9.52□□□□□ -0.89
LINC01339-202ENST00000518436 COLQQ9Y215 455 aaPredicted RBP9.52□□□□□ -0.89
LINC01339-202ENST00000518436 POTEFA5A3E0 1075 aa9.5□□□□□ -0.89
LINC01339-202ENST00000518436 PPP1R37O75864 691 aa9.46□□□□□ -0.9
LINC01339-202ENST00000518436 DPY19L2Q6NUT2 758 aa9.46□□□□□ -0.9
LINC01339-202ENST00000518436 L3MBTL3Q96JM7 780 aaPredicted RBP9.43□□□□□ -0.9
LINC01339-202ENST00000518436 BOLA1Q9Y3E2 137 aa9.41□□□□□ -0.9
LINC01339-202ENST00000518436 G3V3G9 751 aa9.4□□□□□ -0.9
LINC01339-202ENST00000518436 MICALL2Q8IY33 904 aa9.39□□□□□ -0.91
LINC01339-202ENST00000518436 TMEM121BQ9BXQ6 578 aaPredicted RBP9.39□□□□□ -0.91
LINC01339-202ENST00000518436 POTEB2H3BUK9 544 aa9.37□□□□□ -0.91
LINC01339-202ENST00000518436 HAP1P54257 671 aaPredicted RBP9.37□□□□□ -0.91
LINC01339-202ENST00000518436 TSHZ2Q9NRE2 1034 aa9.36□□□□□ -0.91
LINC01339-202ENST00000518436 POTEJP0CG39 1038 aa9.34□□□□□ -0.91
LINC01339-202ENST00000518436 C3orf67Q6ZVT6 689 aa9.32□□□□□ -0.92
LINC01339-202ENST00000518436 CADPS2Q86UW7 1296 aa9.31□□□□□ -0.92
LINC01339-202ENST00000518436 MAMSTRQ6ZN01 415 aa9.3□□□□□ -0.92
LINC01339-202ENST00000518436 SLC24A1O60721 1099 aa9.29□□□□□ -0.92
LINC01339-202ENST00000518436 LHX8Q68G74 356 aa9.29□□□□□ -0.92
LINC01339-202ENST00000518436 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms