RNA–Protein interactions for RNA: ENST00000518278.5

LINC00293-201, long intergenic non-protein coding RNA 293, humanhuman

TSL 4

Gene LINC00293, Length 550 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00293-201ENST00000518278 TMEM121BQ9BXQ6 578 aaPredicted RBP9.07□□□□□ -0.96
LINC00293-201ENST00000518278 PAK3O75914 559 aaPredicted RBP9.05□□□□□ -0.96
LINC00293-201ENST00000518278 MS4A3Q96HJ5 214 aa9.04□□□□□ -0.96
LINC00293-201ENST00000518278 ATN1P54259 1190 aaPredicted RBP9.01□□□□□ -0.97
LINC00293-201ENST00000518278 MKRN4PQ13434 485 aaPredicted RBP9□□□□□ -0.97
LINC00293-201ENST00000518278 KRTAP3-3Q9BYR6 98 aa8.97□□□□□ -0.97
LINC00293-201ENST00000518278 KRTAP3-2Q9BYR7 98 aa8.97□□□□□ -0.97
LINC00293-201ENST00000518278 SLAIN1Q8ND83 568 aa8.95□□□□□ -0.98
LINC00293-201ENST00000518278 KCNA4P22459 653 aa8.94□□□□□ -0.98
LINC00293-201ENST00000518278 CREBZFQ9NS37 354 aa8.94□□□□□ -0.98
LINC00293-201ENST00000518278 MARVELD3Q96A59 401 aa8.91□□□□□ -0.98
LINC00293-201ENST00000518278 COLQQ9Y215 455 aaPredicted RBP8.88□□□□□ -0.99
LINC00293-201ENST00000518278 BMP2KQ9NSY1 1161 aaPredicted RBP8.82□□□□□ -1
LINC00293-201ENST00000518278 SEC24BO95487 1268 aa8.81□□□□□ -1
LINC00293-201ENST00000518278 RNF166Q96A37 237 aaPredicted RBP8.81□□□□□ -1
LINC00293-201ENST00000518278 SNPHO15079 494 aa8.78□□□□□ -1
LINC00293-201ENST00000518278 FOXD4L1Q9NU39 408 aa8.78□□□□□ -1
LINC00293-201ENST00000518278 POTEB3A0JP26 581 aa8.76□□□□□ -1.01
LINC00293-201ENST00000518278 POTEBQ6S5H4 581 aa8.76□□□□□ -1.01
LINC00293-201ENST00000518278 EMP3P54852 163 aa8.75□□□□□ -1.01
LINC00293-201ENST00000518278 HS3ST6Q96QI5 342 aa8.75□□□□□ -1.01
LINC00293-201ENST00000518278 NPM1P06748 294 aaKnown RBP eCLIP8.7□□□□□ -1.02
LINC00293-201ENST00000518278 TIE1P35590 1138 aa8.7□□□□□ -1.02
LINC00293-201ENST00000518278 IER5LQ5T953 404 aa8.69□□□□□ -1.02
LINC00293-201ENST00000518278 TRPC6Q9Y210 931 aa8.68□□□□□ -1.02
LINC00293-201ENST00000518278 ATXN8OSP0DMR3 200 aa8.66□□□□□ -1.02
LINC00293-201ENST00000518278 FAM205CA6NFA0 338 aa8.64□□□□□ -1.03
LINC00293-201ENST00000518278 MNX1P50219 401 aaPredicted RBP8.63□□□□□ -1.03
LINC00293-201ENST00000518278 TTLL13PA6NNM8 815 aa8.61□□□□□ -1.03
LINC00293-201ENST00000518278 MYT1LQ9UL68 1186 aa8.61□□□□□ -1.03
LINC00293-201ENST00000518278 KIF12Q96FN5 646 aa8.59□□□□□ -1.03
LINC00293-201ENST00000518278 CCDC61Q9Y6R9 512 aa8.58□□□□□ -1.04
LINC00293-201ENST00000518278 STAG3Q9UJ98 1225 aa8.55□□□□□ -1.04
LINC00293-201ENST00000518278 TRIM35Q9UPQ4 493 aa8.54□□□□□ -1.04
LINC00293-201ENST00000518278 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.49□□□□□ -1.05
LINC00293-201ENST00000518278 PLCG2P16885 1265 aa8.48□□□□□ -1.05
LINC00293-201ENST00000518278 SLC4A1APQ9BWU0 796 aaKnown RBP8.47□□□□□ -1.05
LINC00293-201ENST00000518278 TSPYL2Q9H2G4 693 aaPredicted RBP8.46□□□□□ -1.06
LINC00293-201ENST00000518278 MAP3K13O43283 966 aa8.45□□□□□ -1.06
LINC00293-201ENST00000518278 PLA2G2EQ9NZK7 142 aa8.43□□□□□ -1.06
LINC00293-201ENST00000518278 PTGER2P43116 358 aa8.42□□□□□ -1.06
LINC00293-201ENST00000518278 IRX5P78411 483 aaPredicted RBP8.41□□□□□ -1.06
LINC00293-201ENST00000518278 OCEL1Q9H607 264 aa8.3□□□□□ -1.08
LINC00293-201ENST00000518278 IRX2Q9BZI1 471 aaPredicted RBP8.29□□□□□ -1.08
LINC00293-201ENST00000518278 SGIP1Q9BQI5 828 aa8.25□□□□□ -1.09
LINC00293-201ENST00000518278 ERBB3P21860 1342 aa8.25□□□□□ -1.09
LINC00293-201ENST00000518278 HOXB1P14653 301 aaPredicted RBP8.23□□□□□ -1.09
LINC00293-201ENST00000518278 C3orf67Q6ZVT6 689 aa8.22□□□□□ -1.09
LINC00293-201ENST00000518278 ZBTB22O15209 634 aa8.21□□□□□ -1.1
LINC00293-201ENST00000518278 TMEM106CQ9BVX2 250 aa8.21□□□□□ -1.1
LINC00293-201ENST00000518278 RGS20O76081 388 aa8.18□□□□□ -1.1
LINC00293-201ENST00000518278 HOXB3P14651 431 aaPredicted RBP8.17□□□□□ -1.1
LINC00293-201ENST00000518278 VARS2Q5ST30 1063 aaKnown RBP8.17□□□□□ -1.1
LINC00293-201ENST00000518278 PCDHB13Q9Y5F0 798 aa8.17□□□□□ -1.1
LINC00293-201ENST00000518278 ZNF687Q8N1G0 1237 aa8.16□□□□□ -1.1
LINC00293-201ENST00000518278 HCSTQ9UBK5 93 aa8.14□□□□□ -1.11
LINC00293-201ENST00000518278 IFNL1Q8IU54 200 aa8.1□□□□□ -1.11
LINC00293-201ENST00000518278 LOC100996750A0A140TA64 210 aa8.08□□□□□ -1.12
LINC00293-201ENST00000518278 PDCD7Q8N8D1 485 aaKnown RBP8.08□□□□□ -1.12
LINC00293-201ENST00000518278 KRTAP4-6Q9BYQ5 205 aa8.08□□□□□ -1.12
LINC00293-201ENST00000518278 ANKRD13DQ6ZTN6 518 aa8.07□□□□□ -1.12
LINC00293-201ENST00000518278 RASEFQ8IZ41 740 aa8.07□□□□□ -1.12
LINC00293-201ENST00000518278 ZNF710Q8N1W2 664 aa8.07□□□□□ -1.12
LINC00293-201ENST00000518278 L3MBTL3Q96JM7 780 aaPredicted RBP8.06□□□□□ -1.12
LINC00293-201ENST00000518278 DOK7Q18PE1 504 aa8□□□□□ -1.13
LINC00293-201ENST00000518278 Q6ZNB5 142 aa8□□□□□ -1.13
LINC00293-201ENST00000518278 LSM11P83369 360 aaKnown RBP eCLIP7.99□□□□□ -1.13
LINC00293-201ENST00000518278 RIMBP2O15034 1052 aa7.92□□□□□ -1.14
LINC00293-201ENST00000518278 IFFO2Q5TF58 517 aa7.89□□□□□ -1.15
LINC00293-201ENST00000518278 ZSWIM6Q9HCJ5 1215 aa7.88□□□□□ -1.15
LINC00293-201ENST00000518278 LCE2BO14633 110 aa7.87□□□□□ -1.15
LINC00293-201ENST00000518278 A0A0G2JS52 829 aa7.85□□□□□ -1.15
LINC00293-201ENST00000518278 SPDYE4A6NLX3 237 aa7.83□□□□□ -1.16
LINC00293-201ENST00000518278 GPR153Q6NV75 609 aa7.81□□□□□ -1.16
LINC00293-201ENST00000518278 PBX2P40425 430 aa7.77□□□□□ -1.17
LINC00293-201ENST00000518278 ILDR1Q86SU0 546 aaPredicted RBP7.76□□□□□ -1.17
LINC00293-201ENST00000518278 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.76□□□□□ -1.17
LINC00293-201ENST00000518278 MKRN3Q13064 507 aaKnown RBP7.75□□□□□ -1.17
LINC00293-201ENST00000518278 TRAF7Q6Q0C0 670 aa7.75□□□□□ -1.17
LINC00293-201ENST00000518278 CSRNP3Q8WYN3 585 aa7.73□□□□□ -1.17
LINC00293-201ENST00000518278 ZNF316A6NFI3 1004 aaPredicted RBP7.72□□□□□ -1.17
LINC00293-201ENST00000518278 ZNF775Q96BV0 537 aaPredicted RBP7.72□□□□□ -1.17
LINC00293-201ENST00000518278 BOLA1Q9Y3E2 137 aa7.72□□□□□ -1.17
LINC00293-201ENST00000518278 PLEKHG5O94827 1062 aa7.71□□□□□ -1.18
LINC00293-201ENST00000518278 LAPTM4AQ15012 233 aa7.71□□□□□ -1.18
LINC00293-201ENST00000518278 POTEEQ6S8J3 1075 aa7.71□□□□□ -1.18
LINC00293-201ENST00000518278 GOLGA2Q08379 1002 aa7.68□□□□□ -1.18
LINC00293-201ENST00000518278 DPY19L2Q6NUT2 758 aa7.68□□□□□ -1.18
LINC00293-201ENST00000518278 ADGRD1Q6QNK2 874 aa7.68□□□□□ -1.18
LINC00293-201ENST00000518278 G3V3G9 751 aa7.67□□□□□ -1.18
LINC00293-201ENST00000518278 NUBP1P53384 320 aa7.67□□□□□ -1.18
LINC00293-201ENST00000518278 DCAF8Q5TAQ9 597 aa7.67□□□□□ -1.18
LINC00293-201ENST00000518278 KCTD12Q96CX2 325 aaKnown RBP7.64□□□□□ -1.19
LINC00293-201ENST00000518278 PCDHB8Q9UN66 801 aa7.64□□□□□ -1.19
LINC00293-201ENST00000518278 ZNF787Q6DD87 383 aa7.62□□□□□ -1.19
LINC00293-201ENST00000518278 FAM212AQ96EL1 285 aa7.62□□□□□ -1.19
LINC00293-201ENST00000518278 AXIN2Q9Y2T1 843 aa7.62□□□□□ -1.19
LINC00293-201ENST00000518278 ARSIQ5FYB1 569 aa7.61□□□□□ -1.19
LINC00293-201ENST00000518278 HRO43593 1189 aa7.6□□□□□ -1.19
LINC00293-201ENST00000518278 MIER1Q8N108 512 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms