RNA–Protein interactions for RNA: ENST00000518209.1

CDH12-204, Transcript of cadherin 12, humanhuman

TSL 3

Gene CDH12, Length 666 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-204ENST00000518209 STAG3Q9UJ98 1225 aa11.69□□□□□ -0.54
CDH12-204ENST00000518209 LCE2DQ5TA82 110 aaPredicted RBP11.68□□□□□ -0.54
CDH12-204ENST00000518209 ASTLQ6HA08 431 aaPredicted RBP11.67□□□□□ -0.54
CDH12-204ENST00000518209 SCUBE2Q9NQ36 999 aa11.66□□□□□ -0.54
CDH12-204ENST00000518209 POTEJP0CG39 1038 aa11.65□□□□□ -0.54
CDH12-204ENST00000518209 ATMINO43313 823 aaPredicted RBP11.6□□□□□ -0.55
CDH12-204ENST00000518209 NPM1P06748 294 aaKnown RBP eCLIP11.6□□□□□ -0.55
CDH12-204ENST00000518209 MS4A3Q96HJ5 214 aa11.54□□□□□ -0.56
CDH12-204ENST00000518209 CDAN1Q8IWY9 1227 aa11.52□□□□□ -0.57
CDH12-204ENST00000518209 MNX1P50219 401 aaPredicted RBP11.42□□□□□ -0.58
CDH12-204ENST00000518209 ATN1P54259 1190 aaPredicted RBP11.42□□□□□ -0.58
CDH12-204ENST00000518209 SPDYE4A6NLX3 237 aa11.36□□□□□ -0.59
CDH12-204ENST00000518209 POTEFA5A3E0 1075 aa11.35□□□□□ -0.59
CDH12-204ENST00000518209 MMRN1Q13201 1228 aa11.3□□□□□ -0.6
CDH12-204ENST00000518209 BMP2KQ9NSY1 1161 aaPredicted RBP11.3□□□□□ -0.6
CDH12-204ENST00000518209 SEC24BO95487 1268 aa11.29□□□□□ -0.6
CDH12-204ENST00000518209 TSPYL2Q9H2G4 693 aaPredicted RBP11.28□□□□□ -0.6
CDH12-204ENST00000518209 CCDC61Q9Y6R9 512 aa11.28□□□□□ -0.6
CDH12-204ENST00000518209 TIE1P35590 1138 aa11.27□□□□□ -0.61
CDH12-204ENST00000518209 KIF12Q96FN5 646 aa11.26□□□□□ -0.61
CDH12-204ENST00000518209 ST18O60284 1047 aa11.25□□□□□ -0.61
CDH12-204ENST00000518209 SPNS2Q8IVW8 549 aa11.25□□□□□ -0.61
CDH12-204ENST00000518209 COLQQ9Y215 455 aaPredicted RBP11.22□□□□□ -0.61
CDH12-204ENST00000518209 SLAIN1Q8ND83 568 aa11.2□□□□□ -0.62
CDH12-204ENST00000518209 IER5LQ5T953 404 aa11.19□□□□□ -0.62
CDH12-204ENST00000518209 TRPC6Q9Y210 931 aa11.17□□□□□ -0.62
CDH12-204ENST00000518209 FKBP8Q14318 412 aa11.16□□□□□ -0.62
CDH12-204ENST00000518209 TMEM121BQ9BXQ6 578 aaPredicted RBP11.16□□□□□ -0.62
CDH12-204ENST00000518209 TTLL13PA6NNM8 815 aa11.15□□□□□ -0.62
CDH12-204ENST00000518209 MAP3K13O43283 966 aa11.14□□□□□ -0.63
CDH12-204ENST00000518209 PROM2Q8N271 834 aa11.12□□□□□ -0.63
CDH12-204ENST00000518209 TRIM35Q9UPQ4 493 aa11.09□□□□□ -0.63
CDH12-204ENST00000518209 SNPHO15079 494 aa11.07□□□□□ -0.64
CDH12-204ENST00000518209 SGIP1Q9BQI5 828 aa11.03□□□□□ -0.64
CDH12-204ENST00000518209 PLCG2P16885 1265 aa11□□□□□ -0.65
CDH12-204ENST00000518209 PLEKHG5O94827 1062 aa10.98□□□□□ -0.65
CDH12-204ENST00000518209 MARVELD3Q96A59 401 aa10.97□□□□□ -0.65
CDH12-204ENST00000518209 PCDHB13Q9Y5F0 798 aa10.95□□□□□ -0.66
CDH12-204ENST00000518209 RASEFQ8IZ41 740 aa10.94□□□□□ -0.66
CDH12-204ENST00000518209 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.9□□□□□ -0.66
CDH12-204ENST00000518209 IRX5P78411 483 aaPredicted RBP10.89□□□□□ -0.67
CDH12-204ENST00000518209 TMEM106CQ9BVX2 250 aa10.88□□□□□ -0.67
CDH12-204ENST00000518209 FBXO3Q9UK99 471 aa10.88□□□□□ -0.67
CDH12-204ENST00000518209 EMP3P54852 163 aa10.87□□□□□ -0.67
CDH12-204ENST00000518209 OCEL1Q9H607 264 aa10.86□□□□□ -0.67
CDH12-204ENST00000518209 MIER1Q8N108 512 aa10.84□□□□□ -0.67
CDH12-204ENST00000518209 IFNL1Q8IU54 200 aa10.83□□□□□ -0.68
CDH12-204ENST00000518209 KRTAP3-3Q9BYR6 98 aa10.83□□□□□ -0.68
CDH12-204ENST00000518209 KRTAP3-2Q9BYR7 98 aa10.83□□□□□ -0.68
CDH12-204ENST00000518209 HS3ST6Q96QI5 342 aa10.8□□□□□ -0.68
CDH12-204ENST00000518209 PLCD3Q8N3E9 789 aa10.78□□□□□ -0.68
CDH12-204ENST00000518209 FAM205CA6NFA0 338 aa10.76□□□□□ -0.69
CDH12-204ENST00000518209 POTEB3A0JP26 581 aa10.73□□□□□ -0.69
CDH12-204ENST00000518209 POTEBQ6S5H4 581 aa10.73□□□□□ -0.69
CDH12-204ENST00000518209 C3orf67Q6ZVT6 689 aa10.72□□□□□ -0.69
CDH12-204ENST00000518209 ZBTB47Q9UFB7 747 aaPredicted RBP10.71□□□□□ -0.69
CDH12-204ENST00000518209 VASPP50552 380 aaPredicted RBP10.68□□□□□ -0.7
CDH12-204ENST00000518209 FAM212AQ96EL1 285 aa10.68□□□□□ -0.7
CDH12-204ENST00000518209 NUBP1P53384 320 aa10.66□□□□□ -0.7
CDH12-204ENST00000518209 L3MBTL3Q96JM7 780 aaPredicted RBP10.66□□□□□ -0.7
CDH12-204ENST00000518209 RNF166Q96A37 237 aaPredicted RBP10.65□□□□□ -0.7
CDH12-204ENST00000518209 KLHL34Q8N239 644 aa10.59□□□□□ -0.71
CDH12-204ENST00000518209 PDCD7Q8N8D1 485 aaKnown RBP10.59□□□□□ -0.71
CDH12-204ENST00000518209 MYT1LQ9UL68 1186 aa10.56□□□□□ -0.72
CDH12-204ENST00000518209 GOLGA2Q08379 1002 aa10.53□□□□□ -0.72
CDH12-204ENST00000518209 MKRN3Q13064 507 aaKnown RBP10.52□□□□□ -0.73
CDH12-204ENST00000518209 IFNLR1Q8IU57 520 aaPredicted RBP10.52□□□□□ -0.73
CDH12-204ENST00000518209 ERBB3P21860 1342 aa10.51□□□□□ -0.73
CDH12-204ENST00000518209 HOXB1P14653 301 aaPredicted RBP10.49□□□□□ -0.73
CDH12-204ENST00000518209 PCDHB8Q9UN66 801 aa10.49□□□□□ -0.73
CDH12-204ENST00000518209 PYGBP11216 843 aa10.48□□□□□ -0.73
CDH12-204ENST00000518209 ZNF710Q8N1W2 664 aa10.48□□□□□ -0.73
CDH12-204ENST00000518209 PTGER2P43116 358 aa10.47□□□□□ -0.73
CDH12-204ENST00000518209 HOXB3P14651 431 aaPredicted RBP10.46□□□□□ -0.73
CDH12-204ENST00000518209 SPOCK2Q92563 424 aa10.46□□□□□ -0.73
CDH12-204ENST00000518209 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.46□□□□□ -0.73
CDH12-204ENST00000518209 DCAF8Q5TAQ9 597 aa10.45□□□□□ -0.74
CDH12-204ENST00000518209 DOK7Q18PE1 504 aa10.43□□□□□ -0.74
CDH12-204ENST00000518209 G3V3G9 751 aa10.4□□□□□ -0.74
CDH12-204ENST00000518209 GSE1Q14687 1217 aa10.4□□□□□ -0.74
CDH12-204ENST00000518209 ZNF467Q7Z7K2 595 aaPredicted RBP10.4□□□□□ -0.74
CDH12-204ENST00000518209 RIMBP2O15034 1052 aa10.39□□□□□ -0.75
CDH12-204ENST00000518209 VARS2Q5ST30 1063 aaKnown RBP10.38□□□□□ -0.75
CDH12-204ENST00000518209 ILDR1Q86SU0 546 aaPredicted RBP10.36□□□□□ -0.75
CDH12-204ENST00000518209 ZNF687Q8N1G0 1237 aa10.35□□□□□ -0.75
CDH12-204ENST00000518209 CIZ1Q9ULV3 898 aaPredicted RBP10.33□□□□□ -0.76
CDH12-204ENST00000518209 BOLA1Q9Y3E2 137 aa10.33□□□□□ -0.76
CDH12-204ENST00000518209 DPY19L2Q6NUT2 758 aa10.29□□□□□ -0.76
CDH12-204ENST00000518209 ZSWIM6Q9HCJ5 1215 aa10.29□□□□□ -0.76
CDH12-204ENST00000518209 PSEN1P49768 467 aa10.28□□□□□ -0.76
CDH12-204ENST00000518209 CHRM1P11229 460 aaPredicted RBP10.27□□□□□ -0.77
CDH12-204ENST00000518209 TRIM41Q8WV44 630 aa10.24□□□□□ -0.77
CDH12-204ENST00000518209 PLA2G2EQ9NZK7 142 aa10.24□□□□□ -0.77
CDH12-204ENST00000518209 ANKRD13DQ6ZTN6 518 aa10.23□□□□□ -0.77
CDH12-204ENST00000518209 PDAP1Q13442 181 aaKnown RBP10.17□□□□□ -0.78
CDH12-204ENST00000518209 GPR153Q6NV75 609 aa10.16□□□□□ -0.78
CDH12-204ENST00000518209 HCSTQ9UBK5 93 aa10.16□□□□□ -0.78
CDH12-204ENST00000518209 LSM11P83369 360 aaKnown RBP eCLIP10.15□□□□□ -0.78
CDH12-204ENST00000518209 CABP2Q9NPB3 220 aa10.15□□□□□ -0.78
CDH12-204ENST00000518209 ECM2O94769 699 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms