RNA–Protein interactions for RNA: ENST00000518170.1

EFCAB13-205, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 355 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-205ENST00000518170 RASEFQ8IZ41 740 aa14.19□□□□□ -0.14
EFCAB13-205ENST00000518170 SPOCK2Q92563 424 aa14.18□□□□□ -0.14
EFCAB13-205ENST00000518170 DCAF8Q5TAQ9 597 aa14.12□□□□□ -0.15
EFCAB13-205ENST00000518170 FAM212AQ96EL1 285 aa14.11□□□□□ -0.15
EFCAB13-205ENST00000518170 HRCP23327 699 aa14.07□□□□□ -0.16
EFCAB13-205ENST00000518170 PHF12Q96QT6 1004 aa14.06□□□□□ -0.16
EFCAB13-205ENST00000518170 CCDC61Q9Y6R9 512 aa14.04□□□□□ -0.16
EFCAB13-205ENST00000518170 CIZ1Q9ULV3 898 aaPredicted RBP14.03□□□□□ -0.16
EFCAB13-205ENST00000518170 GSE1Q14687 1217 aa14.02□□□□□ -0.17
EFCAB13-205ENST00000518170 DCBLD2Q96PD2 775 aa14□□□□□ -0.17
EFCAB13-205ENST00000518170 GALR2O43603 387 aaPredicted RBP13.99□□□□□ -0.17
EFCAB13-205ENST00000518170 PYGBP11216 843 aa13.93□□□□□ -0.18
EFCAB13-205ENST00000518170 KIF12Q96FN5 646 aa13.93□□□□□ -0.18
EFCAB13-205ENST00000518170 POTEIP0CG38 1075 aa13.92□□□□□ -0.18
EFCAB13-205ENST00000518170 MAP3K13O43283 966 aa13.9□□□□□ -0.18
EFCAB13-205ENST00000518170 MS4A3Q96HJ5 214 aa13.9□□□□□ -0.18
EFCAB13-205ENST00000518170 PCDHB13Q9Y5F0 798 aa13.85□□□□□ -0.19
EFCAB13-205ENST00000518170 CHRM1P11229 460 aaPredicted RBP13.82□□□□□ -0.2
EFCAB13-205ENST00000518170 TRIM41Q8WV44 630 aa13.8□□□□□ -0.2
EFCAB13-205ENST00000518170 SGIP1Q9BQI5 828 aa13.8□□□□□ -0.2
EFCAB13-205ENST00000518170 ZCCHC6Q5VYS8 1495 aaKnown RBP13.77□□□□□ -0.21
EFCAB13-205ENST00000518170 IFNL1Q8IU54 200 aa13.77□□□□□ -0.21
EFCAB13-205ENST00000518170 PELP1Q8IZL8 1130 aaKnown RBP13.76□□□□□ -0.21
EFCAB13-205ENST00000518170 PCDHB8Q9UN66 801 aa13.76□□□□□ -0.21
EFCAB13-205ENST00000518170 DCAF1Q9Y4B6 1507 aa13.75□□□□□ -0.21
EFCAB13-205ENST00000518170 SHROOM4Q9ULL8 1493 aa13.75□□□□□ -0.21
EFCAB13-205ENST00000518170 PKD2Q13563 968 aa13.75□□□□□ -0.21
EFCAB13-205ENST00000518170 LHX8Q68G74 356 aa13.75□□□□□ -0.21
EFCAB13-205ENST00000518170 MYO15BQ96JP2 1530 aa13.74□□□□□ -0.21
EFCAB13-205ENST00000518170 ECM2O94769 699 aaPredicted RBP13.74□□□□□ -0.21
EFCAB13-205ENST00000518170 ASTLQ6HA08 431 aaPredicted RBP13.73□□□□□ -0.21
EFCAB13-205ENST00000518170 TRPC6Q9Y210 931 aa13.72□□□□□ -0.21
EFCAB13-205ENST00000518170 ATMINO43313 823 aaPredicted RBP13.71□□□□□ -0.21
EFCAB13-205ENST00000518170 ZNF467Q7Z7K2 595 aaPredicted RBP13.71□□□□□ -0.21
EFCAB13-205ENST00000518170 CCDC180Q9P1Z9 1646 aa13.68□□□□□ -0.22
EFCAB13-205ENST00000518170 SUPT5HO00267 1087 aaKnown RBP13.68□□□□□ -0.22
EFCAB13-205ENST00000518170 TIE1P35590 1138 aa13.68□□□□□ -0.22
EFCAB13-205ENST00000518170 BMP2KQ9NSY1 1161 aaPredicted RBP13.65□□□□□ -0.22
EFCAB13-205ENST00000518170 SLC39A7Q92504 469 aa13.64□□□□□ -0.23
EFCAB13-205ENST00000518170 ATN1P54259 1190 aaPredicted RBP13.63□□□□□ -0.23
EFCAB13-205ENST00000518170 RIOK3O14730 519 aaKnown RBP13.61□□□□□ -0.23
EFCAB13-205ENST00000518170 C7P10643 843 aa13.61□□□□□ -0.23
EFCAB13-205ENST00000518170 RNF25Q96BH1 459 aaPredicted RBP13.61□□□□□ -0.23
EFCAB13-205ENST00000518170 TMEM106CQ9BVX2 250 aa13.61□□□□□ -0.23
EFCAB13-205ENST00000518170 METRNQ9UJH8 293 aa13.61□□□□□ -0.23
EFCAB13-205ENST00000518170 PSEN1P49768 467 aa13.6□□□□□ -0.23
EFCAB13-205ENST00000518170 TTLL13PA6NNM8 815 aa13.59□□□□□ -0.23
EFCAB13-205ENST00000518170 PDAP1Q13442 181 aaKnown RBP13.59□□□□□ -0.23
EFCAB13-205ENST00000518170 RGL2O15211 777 aa13.58□□□□□ -0.24
EFCAB13-205ENST00000518170 AMER1Q5JTC6 1135 aaPredicted RBP13.57□□□□□ -0.24
EFCAB13-205ENST00000518170 PCGF6Q9BYE7 350 aa13.57□□□□□ -0.24
EFCAB13-205ENST00000518170 VGFO15240 615 aaPredicted RBP13.53□□□□□ -0.24
EFCAB13-205ENST00000518170 RTN4Q9NQC3 1192 aaKnown RBP13.53□□□□□ -0.24
EFCAB13-205ENST00000518170 TAOK2Q9UL54 1235 aa13.52□□□□□ -0.25
EFCAB13-205ENST00000518170 TRIM35Q9UPQ4 493 aa13.52□□□□□ -0.25
EFCAB13-205ENST00000518170 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.48□□□□□ -0.25
EFCAB13-205ENST00000518170 ZFP91Q96JP5 570 aaPredicted RBP13.48□□□□□ -0.25
EFCAB13-205ENST00000518170 POTEB2H3BUK9 544 aa13.47□□□□□ -0.25
EFCAB13-205ENST00000518170 GOLGA2Q08379 1002 aa13.47□□□□□ -0.25
EFCAB13-205ENST00000518170 IER5LQ5T953 404 aa13.46□□□□□ -0.25
EFCAB13-205ENST00000518170 PPARGC1BQ86YN6 1023 aaKnown RBP13.46□□□□□ -0.25
EFCAB13-205ENST00000518170 SEC24BO95487 1268 aa13.44□□□□□ -0.26
EFCAB13-205ENST00000518170 CABP2Q9NPB3 220 aa13.44□□□□□ -0.26
EFCAB13-205ENST00000518170 DCAF8L2P0C7V8 631 aa13.43□□□□□ -0.26
EFCAB13-205ENST00000518170 ZEB1P37275 1124 aaPredicted RBP13.43□□□□□ -0.26
EFCAB13-205ENST00000518170 STK25O00506 426 aa13.41□□□□□ -0.26
EFCAB13-205ENST00000518170 MKRN3Q13064 507 aaKnown RBP13.4□□□□□ -0.26
EFCAB13-205ENST00000518170 STK24Q9Y6E0 443 aa13.4□□□□□ -0.26
EFCAB13-205ENST00000518170 BCL11BQ9C0K0 894 aaPredicted RBP13.39□□□□□ -0.27
EFCAB13-205ENST00000518170 POTEFA5A3E0 1075 aa13.38□□□□□ -0.27
EFCAB13-205ENST00000518170 TRIM26Q12899 539 aaPredicted RBP13.38□□□□□ -0.27
EFCAB13-205ENST00000518170 OTUD5Q96G74 571 aa13.38□□□□□ -0.27
EFCAB13-205ENST00000518170 MAMSTRQ6ZN01 415 aa13.37□□□□□ -0.27
EFCAB13-205ENST00000518170 COLQQ9Y215 455 aaPredicted RBP13.36□□□□□ -0.27
EFCAB13-205ENST00000518170 CHGAP10645 457 aaKnown RBP13.34□□□□□ -0.27
EFCAB13-205ENST00000518170 PLCG2P16885 1265 aa13.34□□□□□ -0.27
EFCAB13-205ENST00000518170 EFCAB3Q8N7B9 438 aa13.34□□□□□ -0.27
EFCAB13-205ENST00000518170 SCUBE2Q9NQ36 999 aa13.33□□□□□ -0.28
EFCAB13-205ENST00000518170 MYT1Q01538 1121 aa13.32□□□□□ -0.28
EFCAB13-205ENST00000518170 POTEJP0CG39 1038 aa13.31□□□□□ -0.28
EFCAB13-205ENST00000518170 IRX5P78411 483 aaPredicted RBP13.3□□□□□ -0.28
EFCAB13-205ENST00000518170 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.3□□□□□ -0.28
EFCAB13-205ENST00000518170 OCEL1Q9H607 264 aa13.29□□□□□ -0.28
EFCAB13-205ENST00000518170 HS6ST3Q8IZP7 471 aa13.27□□□□□ -0.29
EFCAB13-205ENST00000518170 SOX12O15370 315 aa13.24□□□□□ -0.29
EFCAB13-205ENST00000518170 PHF8Q9UPP1 1060 aa13.21□□□□□ -0.29
EFCAB13-205ENST00000518170 PDCD7Q8N8D1 485 aaKnown RBP13.19□□□□□ -0.3
EFCAB13-205ENST00000518170 NLRP6P59044 892 aa13.17□□□□□ -0.3
EFCAB13-205ENST00000518170 DPY19L2Q6NUT2 758 aa13.17□□□□□ -0.3
EFCAB13-205ENST00000518170 ILDR1Q86SU0 546 aaPredicted RBP13.17□□□□□ -0.3
EFCAB13-205ENST00000518170 MFRPQ9BY79 579 aa13.15□□□□□ -0.3
EFCAB13-205ENST00000518170 ABCC9O60706 1549 aa13.13□□□□□ -0.31
EFCAB13-205ENST00000518170 L3MBTL3Q96JM7 780 aaPredicted RBP13.12□□□□□ -0.31
EFCAB13-205ENST00000518170 LOC105371045A0A1W2PR82 267 aa13.11□□□□□ -0.31
EFCAB13-205ENST00000518170 FBXO22Q8NEZ5 403 aa13.11□□□□□ -0.31
EFCAB13-205ENST00000518170 MS4A4AQ96JQ5 239 aa13.11□□□□□ -0.31
EFCAB13-205ENST00000518170 G3V3G9 751 aa13.1□□□□□ -0.31
EFCAB13-205ENST00000518170 DNAJC5Q9H3Z4 198 aa13.1□□□□□ -0.31
EFCAB13-205ENST00000518170 NKX1-1Q15270 411 aaPredicted RBP13.09□□□□□ -0.31
EFCAB13-205ENST00000518170 SLAIN1Q8ND83 568 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms