RNA–Protein interactions for RNA: ENST00000517553.1

TRAPPC2-205, Transcript of trafficking protein particle complex 2, humanhuman

TSL 4

Gene TRAPPC2, Length 475 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-205ENST00000517553 CREBZFQ9NS37 354 aa8.46□□□□□ -1.06
TRAPPC2-205ENST00000517553 PHF12Q96QT6 1004 aa8.44□□□□□ -1.06
TRAPPC2-205ENST00000517553 SCUBE2Q9NQ36 999 aa8.44□□□□□ -1.06
TRAPPC2-205ENST00000517553 C7P10643 843 aa8.42□□□□□ -1.06
TRAPPC2-205ENST00000517553 SLC39A7Q92504 469 aa8.41□□□□□ -1.06
TRAPPC2-205ENST00000517553 ASTLQ6HA08 431 aaPredicted RBP8.39□□□□□ -1.07
TRAPPC2-205ENST00000517553 ATMINO43313 823 aaPredicted RBP8.38□□□□□ -1.07
TRAPPC2-205ENST00000517553 STAG3Q9UJ98 1225 aa8.36□□□□□ -1.07
TRAPPC2-205ENST00000517553 PAK3O75914 559 aaPredicted RBP8.35□□□□□ -1.07
TRAPPC2-205ENST00000517553 POTEFA5A3E0 1075 aa8.32□□□□□ -1.08
TRAPPC2-205ENST00000517553 SPDYE4A6NLX3 237 aa8.31□□□□□ -1.08
TRAPPC2-205ENST00000517553 ST18O60284 1047 aa8.31□□□□□ -1.08
TRAPPC2-205ENST00000517553 MS4A3Q96HJ5 214 aa8.28□□□□□ -1.08
TRAPPC2-205ENST00000517553 NPM1P06748 294 aaKnown RBP eCLIP8.27□□□□□ -1.09
TRAPPC2-205ENST00000517553 MNX1P50219 401 aaPredicted RBP8.25□□□□□ -1.09
TRAPPC2-205ENST00000517553 ATN1P54259 1190 aaPredicted RBP8.25□□□□□ -1.09
TRAPPC2-205ENST00000517553 TSPYL2Q9H2G4 693 aaPredicted RBP8.23□□□□□ -1.09
TRAPPC2-205ENST00000517553 COLQQ9Y215 455 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC2-205ENST00000517553 SLAIN1Q8ND83 568 aa8.11□□□□□ -1.11
TRAPPC2-205ENST00000517553 TRPC6Q9Y210 931 aa8.11□□□□□ -1.11
TRAPPC2-205ENST00000517553 CCDC61Q9Y6R9 512 aa8.09□□□□□ -1.11
TRAPPC2-205ENST00000517553 MARVELD3Q96A59 401 aa8.08□□□□□ -1.12
TRAPPC2-205ENST00000517553 KIF12Q96FN5 646 aa8.08□□□□□ -1.12
TRAPPC2-205ENST00000517553 BMP2KQ9NSY1 1161 aaPredicted RBP8.07□□□□□ -1.12
TRAPPC2-205ENST00000517553 MAP3K13O43283 966 aa8.06□□□□□ -1.12
TRAPPC2-205ENST00000517553 KRTAP3-3Q9BYR6 98 aa8.05□□□□□ -1.12
TRAPPC2-205ENST00000517553 KRTAP3-2Q9BYR7 98 aa8.05□□□□□ -1.12
TRAPPC2-205ENST00000517553 SEC24BO95487 1268 aa8.03□□□□□ -1.12
TRAPPC2-205ENST00000517553 MIER1Q8N108 512 aa8.03□□□□□ -1.12
TRAPPC2-205ENST00000517553 TMEM121BQ9BXQ6 578 aaPredicted RBP8.03□□□□□ -1.12
TRAPPC2-205ENST00000517553 RASEFQ8IZ41 740 aa8□□□□□ -1.13
TRAPPC2-205ENST00000517553 POTEB3A0JP26 581 aa7.98□□□□□ -1.13
TRAPPC2-205ENST00000517553 TIE1P35590 1138 aa7.98□□□□□ -1.13
TRAPPC2-205ENST00000517553 POTEBQ6S5H4 581 aa7.98□□□□□ -1.13
TRAPPC2-205ENST00000517553 TTLL13PA6NNM8 815 aa7.97□□□□□ -1.13
TRAPPC2-205ENST00000517553 FKBP8Q14318 412 aa7.97□□□□□ -1.13
TRAPPC2-205ENST00000517553 PLEKHG5O94827 1062 aa7.96□□□□□ -1.14
TRAPPC2-205ENST00000517553 TRIM35Q9UPQ4 493 aa7.95□□□□□ -1.14
TRAPPC2-205ENST00000517553 PROM2Q8N271 834 aa7.94□□□□□ -1.14
TRAPPC2-205ENST00000517553 PCDHB13Q9Y5F0 798 aa7.92□□□□□ -1.14
TRAPPC2-205ENST00000517553 PLCD3Q8N3E9 789 aa7.9□□□□□ -1.14
TRAPPC2-205ENST00000517553 HS3ST6Q96QI5 342 aa7.89□□□□□ -1.15
TRAPPC2-205ENST00000517553 EMP3P54852 163 aa7.88□□□□□ -1.15
TRAPPC2-205ENST00000517553 IFNL1Q8IU54 200 aa7.87□□□□□ -1.15
TRAPPC2-205ENST00000517553 SNPHO15079 494 aa7.86□□□□□ -1.15
TRAPPC2-205ENST00000517553 TMEM106CQ9BVX2 250 aa7.86□□□□□ -1.15
TRAPPC2-205ENST00000517553 FAM205CA6NFA0 338 aa7.85□□□□□ -1.15
TRAPPC2-205ENST00000517553 IER5LQ5T953 404 aa7.85□□□□□ -1.15
TRAPPC2-205ENST00000517553 RNF166Q96A37 237 aaPredicted RBP7.85□□□□□ -1.15
TRAPPC2-205ENST00000517553 PLCG2P16885 1265 aa7.83□□□□□ -1.16
TRAPPC2-205ENST00000517553 NUBP1P53384 320 aa7.82□□□□□ -1.16
TRAPPC2-205ENST00000517553 SGIP1Q9BQI5 828 aa7.82□□□□□ -1.16
TRAPPC2-205ENST00000517553 IRX5P78411 483 aaPredicted RBP7.77□□□□□ -1.17
TRAPPC2-205ENST00000517553 PYGBP11216 843 aa7.76□□□□□ -1.17
TRAPPC2-205ENST00000517553 DCAF8Q5TAQ9 597 aa7.76□□□□□ -1.17
TRAPPC2-205ENST00000517553 FAM212AQ96EL1 285 aa7.76□□□□□ -1.17
TRAPPC2-205ENST00000517553 OCEL1Q9H607 264 aa7.75□□□□□ -1.17
TRAPPC2-205ENST00000517553 ZBTB47Q9UFB7 747 aaPredicted RBP7.75□□□□□ -1.17
TRAPPC2-205ENST00000517553 FBXO3Q9UK99 471 aa7.75□□□□□ -1.17
TRAPPC2-205ENST00000517553 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.74□□□□□ -1.17
TRAPPC2-205ENST00000517553 PCDHB8Q9UN66 801 aa7.74□□□□□ -1.17
TRAPPC2-205ENST00000517553 MYT1LQ9UL68 1186 aa7.71□□□□□ -1.18
TRAPPC2-205ENST00000517553 AMER1Q5JTC6 1135 aaPredicted RBP7.65□□□□□ -1.18
TRAPPC2-205ENST00000517553 C3orf67Q6ZVT6 689 aa7.63□□□□□ -1.19
TRAPPC2-205ENST00000517553 GOLGA2Q08379 1002 aa7.62□□□□□ -1.19
TRAPPC2-205ENST00000517553 MKRN3Q13064 507 aaKnown RBP7.61□□□□□ -1.19
TRAPPC2-205ENST00000517553 PDCD7Q8N8D1 485 aaKnown RBP7.6□□□□□ -1.19
TRAPPC2-205ENST00000517553 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.59□□□□□ -1.19
TRAPPC2-205ENST00000517553 L3MBTL3Q96JM7 780 aaPredicted RBP7.58□□□□□ -1.2
TRAPPC2-205ENST00000517553 VASPP50552 380 aaPredicted RBP7.57□□□□□ -1.2
TRAPPC2-205ENST00000517553 DPY19L2Q6NUT2 758 aa7.57□□□□□ -1.2
TRAPPC2-205ENST00000517553 KLHL34Q8N239 644 aa7.57□□□□□ -1.2
TRAPPC2-205ENST00000517553 PLA2G2EQ9NZK7 142 aa7.54□□□□□ -1.2
TRAPPC2-205ENST00000517553 PSEN1P49768 467 aa7.53□□□□□ -1.2
TRAPPC2-205ENST00000517553 ZNF467Q7Z7K2 595 aaPredicted RBP7.52□□□□□ -1.21
TRAPPC2-205ENST00000517553 ERBB3P21860 1342 aa7.52□□□□□ -1.21
TRAPPC2-205ENST00000517553 GSE1Q14687 1217 aa7.5□□□□□ -1.21
TRAPPC2-205ENST00000517553 RTN4Q9NQC3 1192 aaKnown RBP7.5□□□□□ -1.21
TRAPPC2-205ENST00000517553 HOXB3P14651 431 aaPredicted RBP7.48□□□□□ -1.21
TRAPPC2-205ENST00000517553 G3V3G9 751 aa7.47□□□□□ -1.21
TRAPPC2-205ENST00000517553 HOXB1P14653 301 aaPredicted RBP7.47□□□□□ -1.21
TRAPPC2-205ENST00000517553 ZNF710Q8N1W2 664 aa7.47□□□□□ -1.21
TRAPPC2-205ENST00000517553 CABP2Q9NPB3 220 aa7.47□□□□□ -1.21
TRAPPC2-205ENST00000517553 BOLA1Q9Y3E2 137 aa7.46□□□□□ -1.22
TRAPPC2-205ENST00000517553 VARS2Q5ST30 1063 aaKnown RBP7.45□□□□□ -1.22
TRAPPC2-205ENST00000517553 CHRM1P11229 460 aaPredicted RBP7.44□□□□□ -1.22
TRAPPC2-205ENST00000517553 PTGER2P43116 358 aa7.44□□□□□ -1.22
TRAPPC2-205ENST00000517553 IFNLR1Q8IU57 520 aaPredicted RBP7.43□□□□□ -1.22
TRAPPC2-205ENST00000517553 PDAP1Q13442 181 aaKnown RBP7.42□□□□□ -1.22
TRAPPC2-205ENST00000517553 CIZ1Q9ULV3 898 aaPredicted RBP7.42□□□□□ -1.22
TRAPPC2-205ENST00000517553 ILDR1Q86SU0 546 aaPredicted RBP7.41□□□□□ -1.22
TRAPPC2-205ENST00000517553 ZNF687Q8N1G0 1237 aa7.4□□□□□ -1.22
TRAPPC2-205ENST00000517553 DOK7Q18PE1 504 aa7.38□□□□□ -1.23
TRAPPC2-205ENST00000517553 ANKRD13DQ6ZTN6 518 aa7.38□□□□□ -1.23
TRAPPC2-205ENST00000517553 SPOCK2Q92563 424 aa7.38□□□□□ -1.23
TRAPPC2-205ENST00000517553 EFCAB3Q8N7B9 438 aa7.35□□□□□ -1.23
TRAPPC2-205ENST00000517553 IRX2Q9BZI1 471 aaPredicted RBP7.35□□□□□ -1.23
TRAPPC2-205ENST00000517553 RIMBP2O15034 1052 aa7.33□□□□□ -1.24
TRAPPC2-205ENST00000517553 TMEM92Q6UXU6 159 aa7.32□□□□□ -1.24
TRAPPC2-205ENST00000517553 HCSTQ9UBK5 93 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms