RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 FBLN2P98095 1184 aa4.88□□□□□ -1.63
RNU6-557P-201ENST00000516842 ASTLQ6HA08 431 aaPredicted RBP4.87□□□□□ -1.63
RNU6-557P-201ENST00000516842 MS4A3Q96HJ5 214 aa4.83□□□□□ -1.64
RNU6-557P-201ENST00000516842 ATN1P54259 1190 aaPredicted RBP4.82□□□□□ -1.64
RNU6-557P-201ENST00000516842 CREBZFQ9NS37 354 aa4.8□□□□□ -1.64
RNU6-557P-201ENST00000516842 MARVELD3Q96A59 401 aa4.79□□□□□ -1.64
RNU6-557P-201ENST00000516842 COLQQ9Y215 455 aaPredicted RBP4.77□□□□□ -1.65
RNU6-557P-201ENST00000516842 PAK3O75914 559 aaPredicted RBP4.75□□□□□ -1.65
RNU6-557P-201ENST00000516842 SLAIN1Q8ND83 568 aa4.75□□□□□ -1.65
RNU6-557P-201ENST00000516842 FOXD4L1Q9NU39 408 aa4.75□□□□□ -1.65
RNU6-557P-201ENST00000516842 KRTAP3-3Q9BYR6 98 aa4.73□□□□□ -1.65
RNU6-557P-201ENST00000516842 KRTAP3-2Q9BYR7 98 aa4.73□□□□□ -1.65
RNU6-557P-201ENST00000516842 TRPC6Q9Y210 931 aa4.73□□□□□ -1.65
RNU6-557P-201ENST00000516842 POTEB3A0JP26 581 aa4.71□□□□□ -1.66
RNU6-557P-201ENST00000516842 POTEBQ6S5H4 581 aa4.71□□□□□ -1.66
RNU6-557P-201ENST00000516842 BMP2KQ9NSY1 1161 aaPredicted RBP4.7□□□□□ -1.66
RNU6-557P-201ENST00000516842 SEC24BO95487 1268 aa4.68□□□□□ -1.66
RNU6-557P-201ENST00000516842 TMEM121BQ9BXQ6 578 aaPredicted RBP4.66□□□□□ -1.66
RNU6-557P-201ENST00000516842 MNX1P50219 401 aaPredicted RBP4.63□□□□□ -1.67
RNU6-557P-201ENST00000516842 EMP3P54852 163 aa4.62□□□□□ -1.67
RNU6-557P-201ENST00000516842 HS3ST6Q96QI5 342 aa4.62□□□□□ -1.67
RNU6-557P-201ENST00000516842 FAM205CA6NFA0 338 aa4.61□□□□□ -1.67
RNU6-557P-201ENST00000516842 ZBTB22O15209 634 aa4.61□□□□□ -1.67
RNU6-557P-201ENST00000516842 TSPYL2Q9H2G4 693 aaPredicted RBP4.61□□□□□ -1.67
RNU6-557P-201ENST00000516842 RNF166Q96A37 237 aaPredicted RBP4.6□□□□□ -1.67
RNU6-557P-201ENST00000516842 TTLL13PA6NNM8 815 aa4.59□□□□□ -1.67
RNU6-557P-201ENST00000516842 KIF12Q96FN5 646 aa4.59□□□□□ -1.67
RNU6-557P-201ENST00000516842 NPM1P06748 294 aaKnown RBP eCLIP4.58□□□□□ -1.68
RNU6-557P-201ENST00000516842 ATXN8OSP0DMR3 200 aa4.58□□□□□ -1.68
RNU6-557P-201ENST00000516842 TIE1P35590 1138 aa4.57□□□□□ -1.68
RNU6-557P-201ENST00000516842 TRIM35Q9UPQ4 493 aa4.57□□□□□ -1.68
RNU6-557P-201ENST00000516842 CCDC61Q9Y6R9 512 aa4.57□□□□□ -1.68
RNU6-557P-201ENST00000516842 MAP3K13O43283 966 aa4.56□□□□□ -1.68
RNU6-557P-201ENST00000516842 SNPHO15079 494 aa4.54□□□□□ -1.68
RNU6-557P-201ENST00000516842 IER5LQ5T953 404 aa4.52□□□□□ -1.69
RNU6-557P-201ENST00000516842 SLC4A1APQ9BWU0 796 aaKnown RBP4.51□□□□□ -1.69
RNU6-557P-201ENST00000516842 MYT1LQ9UL68 1186 aa4.51□□□□□ -1.69
RNU6-557P-201ENST00000516842 PLCG2P16885 1265 aa4.5□□□□□ -1.69
RNU6-557P-201ENST00000516842 STAG3Q9UJ98 1225 aa4.5□□□□□ -1.69
RNU6-557P-201ENST00000516842 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.48□□□□□ -1.69
RNU6-557P-201ENST00000516842 IRX5P78411 483 aaPredicted RBP4.46□□□□□ -1.7
RNU6-557P-201ENST00000516842 PLA2G2EQ9NZK7 142 aa4.43□□□□□ -1.7
RNU6-557P-201ENST00000516842 TMEM106CQ9BVX2 250 aa4.42□□□□□ -1.7
RNU6-557P-201ENST00000516842 RASEFQ8IZ41 740 aa4.4□□□□□ -1.71
RNU6-557P-201ENST00000516842 OCEL1Q9H607 264 aa4.4□□□□□ -1.71
RNU6-557P-201ENST00000516842 PCDHB13Q9Y5F0 798 aa4.4□□□□□ -1.71
RNU6-557P-201ENST00000516842 ERBB3P21860 1342 aa4.39□□□□□ -1.71
RNU6-557P-201ENST00000516842 IFNL1Q8IU54 200 aa4.38□□□□□ -1.71
RNU6-557P-201ENST00000516842 HOXB3P14651 431 aaPredicted RBP4.36□□□□□ -1.71
RNU6-557P-201ENST00000516842 VARS2Q5ST30 1063 aaKnown RBP4.36□□□□□ -1.71
RNU6-557P-201ENST00000516842 C3orf67Q6ZVT6 689 aa4.36□□□□□ -1.71
RNU6-557P-201ENST00000516842 ANKRD13DQ6ZTN6 518 aa4.34□□□□□ -1.71
RNU6-557P-201ENST00000516842 HOXB1P14653 301 aaPredicted RBP4.33□□□□□ -1.72
RNU6-557P-201ENST00000516842 PDCD7Q8N8D1 485 aaKnown RBP4.31□□□□□ -1.72
RNU6-557P-201ENST00000516842 IRX2Q9BZI1 471 aaPredicted RBP4.31□□□□□ -1.72
RNU6-557P-201ENST00000516842 SGIP1Q9BQI5 828 aa4.3□□□□□ -1.72
RNU6-557P-201ENST00000516842 SPDYE4A6NLX3 237 aa4.29□□□□□ -1.72
RNU6-557P-201ENST00000516842 ZNF687Q8N1G0 1237 aa4.29□□□□□ -1.72
RNU6-557P-201ENST00000516842 ZNF710Q8N1W2 664 aa4.29□□□□□ -1.72
RNU6-557P-201ENST00000516842 PTGER2P43116 358 aa4.28□□□□□ -1.72
RNU6-557P-201ENST00000516842 HCSTQ9UBK5 93 aa4.25□□□□□ -1.73
RNU6-557P-201ENST00000516842 DPY19L2Q6NUT2 758 aa4.24□□□□□ -1.73
RNU6-557P-201ENST00000516842 L3MBTL3Q96JM7 780 aaPredicted RBP4.24□□□□□ -1.73
RNU6-557P-201ENST00000516842 LSM11P83369 360 aaKnown RBP eCLIP4.22□□□□□ -1.73
RNU6-557P-201ENST00000516842 Q6ZNB5 142 aa4.22□□□□□ -1.73
RNU6-557P-201ENST00000516842 PCDHB8Q9UN66 801 aa4.21□□□□□ -1.74
RNU6-557P-201ENST00000516842 LCE2BO14633 110 aa4.2□□□□□ -1.74
RNU6-557P-201ENST00000516842 DOK7Q18PE1 504 aa4.2□□□□□ -1.74
RNU6-557P-201ENST00000516842 POTEEQ6S8J3 1075 aa4.19□□□□□ -1.74
RNU6-557P-201ENST00000516842 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.19□□□□□ -1.74
RNU6-557P-201ENST00000516842 MIER1Q8N108 512 aa4.18□□□□□ -1.74
RNU6-557P-201ENST00000516842 AXIN2Q9Y2T1 843 aa4.17□□□□□ -1.74
RNU6-557P-201ENST00000516842 NUBP1P53384 320 aa4.16□□□□□ -1.74
RNU6-557P-201ENST00000516842 GPR153Q6NV75 609 aa4.16□□□□□ -1.74
RNU6-557P-201ENST00000516842 PYGBP11216 843 aa4.15□□□□□ -1.75
RNU6-557P-201ENST00000516842 MKRN3Q13064 507 aaKnown RBP4.15□□□□□ -1.75
RNU6-557P-201ENST00000516842 KHSRPQ92945 711 aaKnown RBP eCLIP4.15□□□□□ -1.75
RNU6-557P-201ENST00000516842 RIMBP2O15034 1052 aa4.14□□□□□ -1.75
RNU6-557P-201ENST00000516842 ARSIQ5FYB1 569 aa4.14□□□□□ -1.75
RNU6-557P-201ENST00000516842 LOC100996750A0A140TA64 210 aa4.13□□□□□ -1.75
RNU6-557P-201ENST00000516842 RGS20O76081 388 aa4.13□□□□□ -1.75
RNU6-557P-201ENST00000516842 KRTAP4-6Q9BYQ5 205 aa4.13□□□□□ -1.75
RNU6-557P-201ENST00000516842 BOLA1Q9Y3E2 137 aa4.13□□□□□ -1.75
RNU6-557P-201ENST00000516842 GOLGA2Q08379 1002 aa4.12□□□□□ -1.75
RNU6-557P-201ENST00000516842 KCTD12Q96CX2 325 aaKnown RBP4.11□□□□□ -1.75
RNU6-557P-201ENST00000516842 A0A0G2JS52 829 aa4.1□□□□□ -1.75
RNU6-557P-201ENST00000516842 ZNF316A6NFI3 1004 aaPredicted RBP4.1□□□□□ -1.75
RNU6-557P-201ENST00000516842 PLEKHG5O94827 1062 aa4.1□□□□□ -1.75
RNU6-557P-201ENST00000516842 TMEM92Q6UXU6 159 aa4.1□□□□□ -1.75
RNU6-557P-201ENST00000516842 ILDR1Q86SU0 546 aaPredicted RBP4.1□□□□□ -1.75
RNU6-557P-201ENST00000516842 ZNF775Q96BV0 537 aaPredicted RBP4.09□□□□□ -1.75
RNU6-557P-201ENST00000516842 FAM212AQ96EL1 285 aa4.09□□□□□ -1.75
RNU6-557P-201ENST00000516842 G3V3G9 751 aa4.08□□□□□ -1.76
RNU6-557P-201ENST00000516842 DCAF8Q5TAQ9 597 aa4.08□□□□□ -1.76
RNU6-557P-201ENST00000516842 ADGRD1Q6QNK2 874 aa4.08□□□□□ -1.76
RNU6-557P-201ENST00000516842 ZSWIM6Q9HCJ5 1215 aa4.08□□□□□ -1.76
RNU6-557P-201ENST00000516842 PTPN5P54829 565 aa4.07□□□□□ -1.76
RNU6-557P-201ENST00000516842 TRAF7Q6Q0C0 670 aa4.07□□□□□ -1.76
RNU6-557P-201ENST00000516842 PLCD3Q8N3E9 789 aa4.05□□□□□ -1.76
RNU6-557P-201ENST00000516842 PROM2Q8N271 834 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms