RNA–Protein interactions for RNA: ENST00000516826.1

RNU2-56P-201, Transcript of RNA, U2 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU2-56P, Length 190 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-56P-201ENST00000516826 METRNQ9UJH8 293 aa7.25□□□□□ -1.25
RNU2-56P-201ENST00000516826 ATMINO43313 823 aaPredicted RBP7.24□□□□□ -1.25
RNU2-56P-201ENST00000516826 POTEJP0CG39 1038 aa7.23□□□□□ -1.25
RNU2-56P-201ENST00000516826 SPDYE4A6NLX3 237 aa7.21□□□□□ -1.26
RNU2-56P-201ENST00000516826 MS4A3Q96HJ5 214 aa7.2□□□□□ -1.26
RNU2-56P-201ENST00000516826 LCE2DQ5TA82 110 aaPredicted RBP7.18□□□□□ -1.26
RNU2-56P-201ENST00000516826 SCUBE2Q9NQ36 999 aa7.18□□□□□ -1.26
RNU2-56P-201ENST00000516826 CSRNP3Q8WYN3 585 aa7.15□□□□□ -1.26
RNU2-56P-201ENST00000516826 FAM163AQ96GL9 167 aaPredicted RBP7.15□□□□□ -1.26
RNU2-56P-201ENST00000516826 ATN1P54259 1190 aaPredicted RBP7.13□□□□□ -1.27
RNU2-56P-201ENST00000516826 CCDC61Q9Y6R9 512 aa7.12□□□□□ -1.27
RNU2-56P-201ENST00000516826 KIF12Q96FN5 646 aa7.1□□□□□ -1.27
RNU2-56P-201ENST00000516826 POTEFA5A3E0 1075 aa7.09□□□□□ -1.27
RNU2-56P-201ENST00000516826 TIE1P35590 1138 aa7.08□□□□□ -1.28
RNU2-56P-201ENST00000516826 TSPYL2Q9H2G4 693 aaPredicted RBP7.08□□□□□ -1.28
RNU2-56P-201ENST00000516826 BMP2KQ9NSY1 1161 aaPredicted RBP7.08□□□□□ -1.28
RNU2-56P-201ENST00000516826 PROM2Q8N271 834 aa7.05□□□□□ -1.28
RNU2-56P-201ENST00000516826 CDAN1Q8IWY9 1227 aa7.03□□□□□ -1.28
RNU2-56P-201ENST00000516826 IER5LQ5T953 404 aa7.02□□□□□ -1.29
RNU2-56P-201ENST00000516826 MAP3K13O43283 966 aa7.01□□□□□ -1.29
RNU2-56P-201ENST00000516826 SEC24BO95487 1268 aa7.01□□□□□ -1.29
RNU2-56P-201ENST00000516826 SGIP1Q9BQI5 828 aa7.01□□□□□ -1.29
RNU2-56P-201ENST00000516826 TRPC6Q9Y210 931 aa7.01□□□□□ -1.29
RNU2-56P-201ENST00000516826 COLQQ9Y215 455 aaPredicted RBP7□□□□□ -1.29
RNU2-56P-201ENST00000516826 TTLL13PA6NNM8 815 aa6.99□□□□□ -1.29
RNU2-56P-201ENST00000516826 PLEKHG5O94827 1062 aa6.98□□□□□ -1.29
RNU2-56P-201ENST00000516826 RASEFQ8IZ41 740 aa6.95□□□□□ -1.3
RNU2-56P-201ENST00000516826 ST18O60284 1047 aa6.94□□□□□ -1.3
RNU2-56P-201ENST00000516826 TRIM35Q9UPQ4 493 aa6.94□□□□□ -1.3
RNU2-56P-201ENST00000516826 MIER1Q8N108 512 aa6.92□□□□□ -1.3
RNU2-56P-201ENST00000516826 SLAIN1Q8ND83 568 aa6.92□□□□□ -1.3
RNU2-56P-201ENST00000516826 TMEM121BQ9BXQ6 578 aaPredicted RBP6.92□□□□□ -1.3
RNU2-56P-201ENST00000516826 PCDHB13Q9Y5F0 798 aa6.9□□□□□ -1.3
RNU2-56P-201ENST00000516826 MMRN1Q13201 1228 aa6.89□□□□□ -1.31
RNU2-56P-201ENST00000516826 SPNS2Q8IVW8 549 aa6.88□□□□□ -1.31
RNU2-56P-201ENST00000516826 SNPHO15079 494 aa6.87□□□□□ -1.31
RNU2-56P-201ENST00000516826 ZBTB47Q9UFB7 747 aaPredicted RBP6.87□□□□□ -1.31
RNU2-56P-201ENST00000516826 PLCG2P16885 1265 aa6.86□□□□□ -1.31
RNU2-56P-201ENST00000516826 IRX5P78411 483 aaPredicted RBP6.86□□□□□ -1.31
RNU2-56P-201ENST00000516826 IFNL1Q8IU54 200 aa6.85□□□□□ -1.31
RNU2-56P-201ENST00000516826 NUBP1P53384 320 aa6.84□□□□□ -1.31
RNU2-56P-201ENST00000516826 TMEM106CQ9BVX2 250 aa6.84□□□□□ -1.31
RNU2-56P-201ENST00000516826 OCEL1Q9H607 264 aa6.83□□□□□ -1.32
RNU2-56P-201ENST00000516826 PLCD3Q8N3E9 789 aa6.81□□□□□ -1.32
RNU2-56P-201ENST00000516826 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.8□□□□□ -1.32
RNU2-56P-201ENST00000516826 FAM212AQ96EL1 285 aa6.79□□□□□ -1.32
RNU2-56P-201ENST00000516826 EHMT2Q96KQ7 1210 aa6.78□□□□□ -1.32
RNU2-56P-201ENST00000516826 MARVELD3Q96A59 401 aa6.74□□□□□ -1.33
RNU2-56P-201ENST00000516826 L3MBTL3Q96JM7 780 aaPredicted RBP6.71□□□□□ -1.34
RNU2-56P-201ENST00000516826 EMP3P54852 163 aa6.7□□□□□ -1.34
RNU2-56P-201ENST00000516826 KRTAP3-3Q9BYR6 98 aa6.69□□□□□ -1.34
RNU2-56P-201ENST00000516826 KRTAP3-2Q9BYR7 98 aa6.69□□□□□ -1.34
RNU2-56P-201ENST00000516826 C3orf67Q6ZVT6 689 aa6.68□□□□□ -1.34
RNU2-56P-201ENST00000516826 PDCD7Q8N8D1 485 aaKnown RBP6.68□□□□□ -1.34
RNU2-56P-201ENST00000516826 DCAF8Q5TAQ9 597 aa6.67□□□□□ -1.34
RNU2-56P-201ENST00000516826 HS3ST6Q96QI5 342 aa6.67□□□□□ -1.34
RNU2-56P-201ENST00000516826 POTEB3A0JP26 581 aa6.66□□□□□ -1.34
RNU2-56P-201ENST00000516826 PYGBP11216 843 aa6.66□□□□□ -1.34
RNU2-56P-201ENST00000516826 POTEBQ6S5H4 581 aa6.66□□□□□ -1.34
RNU2-56P-201ENST00000516826 PCDHB8Q9UN66 801 aa6.66□□□□□ -1.34
RNU2-56P-201ENST00000516826 FAM205CA6NFA0 338 aa6.64□□□□□ -1.35
RNU2-56P-201ENST00000516826 MKRN3Q13064 507 aaKnown RBP6.64□□□□□ -1.35
RNU2-56P-201ENST00000516826 ZNF467Q7Z7K2 595 aaPredicted RBP6.63□□□□□ -1.35
RNU2-56P-201ENST00000516826 ILDR1Q86SU0 546 aaPredicted RBP6.63□□□□□ -1.35
RNU2-56P-201ENST00000516826 GOLGA2Q08379 1002 aa6.62□□□□□ -1.35
RNU2-56P-201ENST00000516826 CHRM1P11229 460 aaPredicted RBP6.61□□□□□ -1.35
RNU2-56P-201ENST00000516826 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.6□□□□□ -1.35
RNU2-56P-201ENST00000516826 GSE1Q14687 1217 aa6.59□□□□□ -1.35
RNU2-56P-201ENST00000516826 HOXB1P14653 301 aaPredicted RBP6.57□□□□□ -1.36
RNU2-56P-201ENST00000516826 HOXB3P14651 431 aaPredicted RBP6.56□□□□□ -1.36
RNU2-56P-201ENST00000516826 PSEN1P49768 467 aa6.55□□□□□ -1.36
RNU2-56P-201ENST00000516826 FBXO3Q9UK99 471 aa6.54□□□□□ -1.36
RNU2-56P-201ENST00000516826 DOK7Q18PE1 504 aa6.53□□□□□ -1.36
RNU2-56P-201ENST00000516826 RNF166Q96A37 237 aaPredicted RBP6.53□□□□□ -1.36
RNU2-56P-201ENST00000516826 BOLA1Q9Y3E2 137 aa6.53□□□□□ -1.36
RNU2-56P-201ENST00000516826 ZNF710Q8N1W2 664 aa6.52□□□□□ -1.37
RNU2-56P-201ENST00000516826 ERBB3P21860 1342 aa6.51□□□□□ -1.37
RNU2-56P-201ENST00000516826 G3V3G9 751 aa6.51□□□□□ -1.37
RNU2-56P-201ENST00000516826 PDAP1Q13442 181 aaKnown RBP6.51□□□□□ -1.37
RNU2-56P-201ENST00000516826 DPY19L2Q6NUT2 758 aa6.51□□□□□ -1.37
RNU2-56P-201ENST00000516826 PTGER2P43116 358 aa6.49□□□□□ -1.37
RNU2-56P-201ENST00000516826 ZSWIM6Q9HCJ5 1215 aa6.49□□□□□ -1.37
RNU2-56P-201ENST00000516826 MYT1LQ9UL68 1186 aa6.49□□□□□ -1.37
RNU2-56P-201ENST00000516826 RIMBP2O15034 1052 aa6.48□□□□□ -1.37
RNU2-56P-201ENST00000516826 FKBP8Q14318 412 aa6.47□□□□□ -1.37
RNU2-56P-201ENST00000516826 ZNF687Q8N1G0 1237 aa6.47□□□□□ -1.37
RNU2-56P-201ENST00000516826 KLHL34Q8N239 644 aa6.46□□□□□ -1.38
RNU2-56P-201ENST00000516826 VARS2Q5ST30 1063 aaKnown RBP6.45□□□□□ -1.38
RNU2-56P-201ENST00000516826 CABP2Q9NPB3 220 aa6.44□□□□□ -1.38
RNU2-56P-201ENST00000516826 VASPP50552 380 aaPredicted RBP6.41□□□□□ -1.38
RNU2-56P-201ENST00000516826 GPR153Q6NV75 609 aa6.41□□□□□ -1.38
RNU2-56P-201ENST00000516826 TMEM92Q6UXU6 159 aa6.35□□□□□ -1.39
RNU2-56P-201ENST00000516826 MICALL2Q8IY33 904 aa6.35□□□□□ -1.39
RNU2-56P-201ENST00000516826 ANKRD13DQ6ZTN6 518 aa6.34□□□□□ -1.39
RNU2-56P-201ENST00000516826 EFCAB3Q8N7B9 438 aa6.34□□□□□ -1.39
RNU2-56P-201ENST00000516826 SPOCK2Q92563 424 aa6.33□□□□□ -1.4
RNU2-56P-201ENST00000516826 ZNF316A6NFI3 1004 aaPredicted RBP6.32□□□□□ -1.4
RNU2-56P-201ENST00000516826 SOX12O15370 315 aa6.32□□□□□ -1.4
RNU2-56P-201ENST00000516826 LSM11P83369 360 aaKnown RBP eCLIP6.32□□□□□ -1.4
RNU2-56P-201ENST00000516826 TRIM41Q8WV44 630 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms