RNA–Protein interactions for RNA: ENST00000516379.1

SNORA40.13-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 120 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.13-201ENST00000516379 MMRN1Q13201 1228 aa6.83□□□□□ -1.32
SNORA40.13-201ENST00000516379 CREBZFQ9NS37 354 aa6.83□□□□□ -1.32
SNORA40.13-201ENST00000516379 ZBTB22O15209 634 aa6.8□□□□□ -1.32
SNORA40.13-201ENST00000516379 SPNS2Q8IVW8 549 aa6.78□□□□□ -1.32
SNORA40.13-201ENST00000516379 SLC4A1APQ9BWU0 796 aaKnown RBP6.78□□□□□ -1.32
SNORA40.13-201ENST00000516379 POTEFA5A3E0 1075 aa6.77□□□□□ -1.33
SNORA40.13-201ENST00000516379 MS4A3Q96HJ5 214 aa6.77□□□□□ -1.33
SNORA40.13-201ENST00000516379 PAK3O75914 559 aaPredicted RBP6.76□□□□□ -1.33
SNORA40.13-201ENST00000516379 ATN1P54259 1190 aaPredicted RBP6.73□□□□□ -1.33
SNORA40.13-201ENST00000516379 ST18O60284 1047 aa6.71□□□□□ -1.34
SNORA40.13-201ENST00000516379 MNX1P50219 401 aaPredicted RBP6.67□□□□□ -1.34
SNORA40.13-201ENST00000516379 COLQQ9Y215 455 aaPredicted RBP6.63□□□□□ -1.35
SNORA40.13-201ENST00000516379 NPM1P06748 294 aaKnown RBP eCLIP6.62□□□□□ -1.35
SNORA40.13-201ENST00000516379 BMP2KQ9NSY1 1161 aaPredicted RBP6.62□□□□□ -1.35
SNORA40.13-201ENST00000516379 STAG3Q9UJ98 1225 aa6.61□□□□□ -1.35
SNORA40.13-201ENST00000516379 TRPC6Q9Y210 931 aa6.59□□□□□ -1.35
SNORA40.13-201ENST00000516379 SLAIN1Q8ND83 568 aa6.58□□□□□ -1.36
SNORA40.13-201ENST00000516379 TMEM121BQ9BXQ6 578 aaPredicted RBP6.56□□□□□ -1.36
SNORA40.13-201ENST00000516379 CCDC61Q9Y6R9 512 aa6.55□□□□□ -1.36
SNORA40.13-201ENST00000516379 SEC24BO95487 1268 aa6.54□□□□□ -1.36
SNORA40.13-201ENST00000516379 TIE1P35590 1138 aa6.54□□□□□ -1.36
SNORA40.13-201ENST00000516379 KIF12Q96FN5 646 aa6.54□□□□□ -1.36
SNORA40.13-201ENST00000516379 MARVELD3Q96A59 401 aa6.51□□□□□ -1.37
SNORA40.13-201ENST00000516379 TTLL13PA6NNM8 815 aa6.5□□□□□ -1.37
SNORA40.13-201ENST00000516379 KRTAP3-3Q9BYR6 98 aa6.5□□□□□ -1.37
SNORA40.13-201ENST00000516379 KRTAP3-2Q9BYR7 98 aa6.5□□□□□ -1.37
SNORA40.13-201ENST00000516379 TSPYL2Q9H2G4 693 aaPredicted RBP6.5□□□□□ -1.37
SNORA40.13-201ENST00000516379 IER5LQ5T953 404 aa6.49□□□□□ -1.37
SNORA40.13-201ENST00000516379 MAP3K13O43283 966 aa6.46□□□□□ -1.38
SNORA40.13-201ENST00000516379 POTEB3A0JP26 581 aa6.45□□□□□ -1.38
SNORA40.13-201ENST00000516379 POTEBQ6S5H4 581 aa6.45□□□□□ -1.38
SNORA40.13-201ENST00000516379 TRIM35Q9UPQ4 493 aa6.45□□□□□ -1.38
SNORA40.13-201ENST00000516379 SNPHO15079 494 aa6.42□□□□□ -1.38
SNORA40.13-201ENST00000516379 HS3ST6Q96QI5 342 aa6.39□□□□□ -1.39
SNORA40.13-201ENST00000516379 EMP3P54852 163 aa6.38□□□□□ -1.39
SNORA40.13-201ENST00000516379 IRX5P78411 483 aaPredicted RBP6.36□□□□□ -1.39
SNORA40.13-201ENST00000516379 FAM205CA6NFA0 338 aa6.34□□□□□ -1.39
SNORA40.13-201ENST00000516379 PLCG2P16885 1265 aa6.34□□□□□ -1.39
SNORA40.13-201ENST00000516379 SGIP1Q9BQI5 828 aa6.32□□□□□ -1.4
SNORA40.13-201ENST00000516379 SPDYE4A6NLX3 237 aa6.31□□□□□ -1.4
SNORA40.13-201ENST00000516379 RNF166Q96A37 237 aaPredicted RBP6.31□□□□□ -1.4
SNORA40.13-201ENST00000516379 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.31□□□□□ -1.4
SNORA40.13-201ENST00000516379 RASEFQ8IZ41 740 aa6.3□□□□□ -1.4
SNORA40.13-201ENST00000516379 OCEL1Q9H607 264 aa6.28□□□□□ -1.4
SNORA40.13-201ENST00000516379 PCDHB13Q9Y5F0 798 aa6.28□□□□□ -1.4
SNORA40.13-201ENST00000516379 TMEM106CQ9BVX2 250 aa6.26□□□□□ -1.41
SNORA40.13-201ENST00000516379 IFNL1Q8IU54 200 aa6.25□□□□□ -1.41
SNORA40.13-201ENST00000516379 MYT1LQ9UL68 1186 aa6.22□□□□□ -1.41
SNORA40.13-201ENST00000516379 C3orf67Q6ZVT6 689 aa6.16□□□□□ -1.42
SNORA40.13-201ENST00000516379 PDCD7Q8N8D1 485 aaKnown RBP6.16□□□□□ -1.42
SNORA40.13-201ENST00000516379 HOXB3P14651 431 aaPredicted RBP6.15□□□□□ -1.42
SNORA40.13-201ENST00000516379 HOXB1P14653 301 aaPredicted RBP6.13□□□□□ -1.43
SNORA40.13-201ENST00000516379 PROM2Q8N271 834 aa6.13□□□□□ -1.43
SNORA40.13-201ENST00000516379 ERBB3P21860 1342 aa6.12□□□□□ -1.43
SNORA40.13-201ENST00000516379 PTGER2P43116 358 aa6.1□□□□□ -1.43
SNORA40.13-201ENST00000516379 NUBP1P53384 320 aa6.1□□□□□ -1.43
SNORA40.13-201ENST00000516379 L3MBTL3Q96JM7 780 aaPredicted RBP6.1□□□□□ -1.43
SNORA40.13-201ENST00000516379 PLEKHG5O94827 1062 aa6.08□□□□□ -1.44
SNORA40.13-201ENST00000516379 MIER1Q8N108 512 aa6.08□□□□□ -1.44
SNORA40.13-201ENST00000516379 VARS2Q5ST30 1063 aaKnown RBP6.07□□□□□ -1.44
SNORA40.13-201ENST00000516379 ZNF687Q8N1G0 1237 aa6.06□□□□□ -1.44
SNORA40.13-201ENST00000516379 PLA2G2EQ9NZK7 142 aa6.06□□□□□ -1.44
SNORA40.13-201ENST00000516379 ZNF710Q8N1W2 664 aa6.03□□□□□ -1.44
SNORA40.13-201ENST00000516379 ILDR1Q86SU0 546 aaPredicted RBP6.01□□□□□ -1.45
SNORA40.13-201ENST00000516379 PCDHB8Q9UN66 801 aa6.01□□□□□ -1.45
SNORA40.13-201ENST00000516379 DOK7Q18PE1 504 aa6□□□□□ -1.45
SNORA40.13-201ENST00000516379 FAM212AQ96EL1 285 aa6□□□□□ -1.45
SNORA40.13-201ENST00000516379 ANKRD13DQ6ZTN6 518 aa5.98□□□□□ -1.45
SNORA40.13-201ENST00000516379 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.98□□□□□ -1.45
SNORA40.13-201ENST00000516379 MKRN3Q13064 507 aaKnown RBP5.97□□□□□ -1.45
SNORA40.13-201ENST00000516379 DPY19L2Q6NUT2 758 aa5.97□□□□□ -1.45
SNORA40.13-201ENST00000516379 PYGBP11216 843 aa5.96□□□□□ -1.46
SNORA40.13-201ENST00000516379 HCSTQ9UBK5 93 aa5.94□□□□□ -1.46
SNORA40.13-201ENST00000516379 RIMBP2O15034 1052 aa5.93□□□□□ -1.46
SNORA40.13-201ENST00000516379 GOLGA2Q08379 1002 aa5.93□□□□□ -1.46
SNORA40.13-201ENST00000516379 GPR153Q6NV75 609 aa5.93□□□□□ -1.46
SNORA40.13-201ENST00000516379 PLCD3Q8N3E9 789 aa5.93□□□□□ -1.46
SNORA40.13-201ENST00000516379 ZBTB47Q9UFB7 747 aaPredicted RBP5.93□□□□□ -1.46
SNORA40.13-201ENST00000516379 LSM11P83369 360 aaKnown RBP eCLIP5.92□□□□□ -1.46
SNORA40.13-201ENST00000516379 ZSWIM6Q9HCJ5 1215 aa5.92□□□□□ -1.46
SNORA40.13-201ENST00000516379 BOLA1Q9Y3E2 137 aa5.92□□□□□ -1.46
SNORA40.13-201ENST00000516379 IRX2Q9BZI1 471 aaPredicted RBP5.89□□□□□ -1.47
SNORA40.13-201ENST00000516379 CSRNP3Q8WYN3 585 aa5.88□□□□□ -1.47
SNORA40.13-201ENST00000516379 RGS20O76081 388 aa5.86□□□□□ -1.47
SNORA40.13-201ENST00000516379 DCAF8Q5TAQ9 597 aa5.86□□□□□ -1.47
SNORA40.13-201ENST00000516379 G3V3G9 751 aa5.85□□□□□ -1.47
SNORA40.13-201ENST00000516379 POTEEQ6S8J3 1075 aa5.84□□□□□ -1.47
SNORA40.13-201ENST00000516379 TMEM92Q6UXU6 159 aa5.84□□□□□ -1.47
SNORA40.13-201ENST00000516379 ZNF467Q7Z7K2 595 aaPredicted RBP5.84□□□□□ -1.47
SNORA40.13-201ENST00000516379 PSEN1P49768 467 aa5.83□□□□□ -1.48
SNORA40.13-201ENST00000516379 ZNF316A6NFI3 1004 aaPredicted RBP5.82□□□□□ -1.48
SNORA40.13-201ENST00000516379 ARSIQ5FYB1 569 aa5.81□□□□□ -1.48
SNORA40.13-201ENST00000516379 PBX2P40425 430 aa5.79□□□□□ -1.48
SNORA40.13-201ENST00000516379 KHSRPQ92945 711 aaKnown RBP eCLIP5.79□□□□□ -1.48
SNORA40.13-201ENST00000516379 IFFO2Q5TF58 517 aa5.77□□□□□ -1.49
SNORA40.13-201ENST00000516379 AXIN2Q9Y2T1 843 aa5.77□□□□□ -1.49
SNORA40.13-201ENST00000516379 CHRM1P11229 460 aaPredicted RBP5.75□□□□□ -1.49
SNORA40.13-201ENST00000516379 CABP2Q9NPB3 220 aa5.75□□□□□ -1.49
SNORA40.13-201ENST00000516379 ADGRD1Q6QNK2 874 aa5.74□□□□□ -1.49
SNORA40.13-201ENST00000516379 PDAP1Q13442 181 aaKnown RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms