RNA–Protein interactions for RNA: ENST00000516329.1

SNORA40.12-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 111 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.12-201ENST00000516329 FAM212AQ96EL1 285 aa9.89□□□□□ -0.83
SNORA40.12-201ENST00000516329 DCAF8Q5TAQ9 597 aa9.86□□□□□ -0.83
SNORA40.12-201ENST00000516329 CCDC61Q9Y6R9 512 aa9.85□□□□□ -0.83
SNORA40.12-201ENST00000516329 GABBR2O75899 941 aa9.84□□□□□ -0.83
SNORA40.12-201ENST00000516329 CIZ1Q9ULV3 898 aaPredicted RBP9.81□□□□□ -0.84
SNORA40.12-201ENST00000516329 GSE1Q14687 1217 aa9.78□□□□□ -0.84
SNORA40.12-201ENST00000516329 GALR2O43603 387 aaPredicted RBP9.77□□□□□ -0.85
SNORA40.12-201ENST00000516329 KIF12Q96FN5 646 aa9.77□□□□□ -0.85
SNORA40.12-201ENST00000516329 PYGBP11216 843 aa9.76□□□□□ -0.85
SNORA40.12-201ENST00000516329 MS4A3Q96HJ5 214 aa9.76□□□□□ -0.85
SNORA40.12-201ENST00000516329 MAP3K13O43283 966 aa9.75□□□□□ -0.85
SNORA40.12-201ENST00000516329 CLCN6P51797 869 aa9.73□□□□□ -0.85
SNORA40.12-201ENST00000516329 PCDHB13Q9Y5F0 798 aa9.71□□□□□ -0.86
SNORA40.12-201ENST00000516329 IFNL1Q8IU54 200 aa9.67□□□□□ -0.86
SNORA40.12-201ENST00000516329 DCBLD2Q96PD2 775 aa9.67□□□□□ -0.86
SNORA40.12-201ENST00000516329 TRPC6Q9Y210 931 aa9.67□□□□□ -0.86
SNORA40.12-201ENST00000516329 PCDHB8Q9UN66 801 aa9.65□□□□□ -0.86
SNORA40.12-201ENST00000516329 SGIP1Q9BQI5 828 aa9.64□□□□□ -0.87
SNORA40.12-201ENST00000516329 POTEIP0CG38 1075 aa9.63□□□□□ -0.87
SNORA40.12-201ENST00000516329 CHRM1P11229 460 aaPredicted RBP9.62□□□□□ -0.87
SNORA40.12-201ENST00000516329 TRIM41Q8WV44 630 aa9.61□□□□□ -0.87
SNORA40.12-201ENST00000516329 PKD2Q13563 968 aa9.6□□□□□ -0.87
SNORA40.12-201ENST00000516329 ECM2O94769 699 aaPredicted RBP9.59□□□□□ -0.87
SNORA40.12-201ENST00000516329 ZNF467Q7Z7K2 595 aaPredicted RBP9.59□□□□□ -0.87
SNORA40.12-201ENST00000516329 BMP2KQ9NSY1 1161 aaPredicted RBP9.59□□□□□ -0.87
SNORA40.12-201ENST00000516329 ATMINO43313 823 aaPredicted RBP9.57□□□□□ -0.88
SNORA40.12-201ENST00000516329 TIE1P35590 1138 aa9.56□□□□□ -0.88
SNORA40.12-201ENST00000516329 TMEM106CQ9BVX2 250 aa9.56□□□□□ -0.88
SNORA40.12-201ENST00000516329 TTLL13PA6NNM8 815 aa9.55□□□□□ -0.88
SNORA40.12-201ENST00000516329 ATN1P54259 1190 aaPredicted RBP9.55□□□□□ -0.88
SNORA40.12-201ENST00000516329 ASTLQ6HA08 431 aaPredicted RBP9.55□□□□□ -0.88
SNORA40.12-201ENST00000516329 RNF25Q96BH1 459 aaPredicted RBP9.55□□□□□ -0.88
SNORA40.12-201ENST00000516329 PELP1Q8IZL8 1130 aaKnown RBP9.54□□□□□ -0.88
SNORA40.12-201ENST00000516329 PSEN1P49768 467 aa9.52□□□□□ -0.89
SNORA40.12-201ENST00000516329 RIOK3O14730 519 aaKnown RBP9.51□□□□□ -0.89
SNORA40.12-201ENST00000516329 PDAP1Q13442 181 aaKnown RBP9.51□□□□□ -0.89
SNORA40.12-201ENST00000516329 RGL2O15211 777 aa9.5□□□□□ -0.89
SNORA40.12-201ENST00000516329 TRIM35Q9UPQ4 493 aa9.5□□□□□ -0.89
SNORA40.12-201ENST00000516329 METRNQ9UJH8 293 aa9.46□□□□□ -0.9
SNORA40.12-201ENST00000516329 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.45□□□□□ -0.9
SNORA40.12-201ENST00000516329 VGFO15240 615 aaPredicted RBP9.45□□□□□ -0.9
SNORA40.12-201ENST00000516329 SLC39A7Q92504 469 aa9.45□□□□□ -0.9
SNORA40.12-201ENST00000516329 ZFP91Q96JP5 570 aaPredicted RBP9.45□□□□□ -0.9
SNORA40.12-201ENST00000516329 C7P10643 843 aa9.42□□□□□ -0.9
SNORA40.12-201ENST00000516329 GOLGA2Q08379 1002 aa9.42□□□□□ -0.9
SNORA40.12-201ENST00000516329 CABP2Q9NPB3 220 aa9.42□□□□□ -0.9
SNORA40.12-201ENST00000516329 RTN4Q9NQC3 1192 aaKnown RBP9.41□□□□□ -0.9
SNORA40.12-201ENST00000516329 AMER1Q5JTC6 1135 aaPredicted RBP9.4□□□□□ -0.9
SNORA40.12-201ENST00000516329 TAOK2Q9UL54 1235 aa9.39□□□□□ -0.91
SNORA40.12-201ENST00000516329 SEC24BO95487 1268 aa9.38□□□□□ -0.91
SNORA40.12-201ENST00000516329 MKRN3Q13064 507 aaKnown RBP9.38□□□□□ -0.91
SNORA40.12-201ENST00000516329 IER5LQ5T953 404 aa9.38□□□□□ -0.91
SNORA40.12-201ENST00000516329 BCL11BQ9C0K0 894 aaPredicted RBP9.38□□□□□ -0.91
SNORA40.12-201ENST00000516329 STK25O00506 426 aa9.37□□□□□ -0.91
SNORA40.12-201ENST00000516329 DCAF8L2P0C7V8 631 aa9.37□□□□□ -0.91
SNORA40.12-201ENST00000516329 COLQQ9Y215 455 aaPredicted RBP9.37□□□□□ -0.91
SNORA40.12-201ENST00000516329 STK24Q9Y6E0 443 aa9.37□□□□□ -0.91
SNORA40.12-201ENST00000516329 POTEFA5A3E0 1075 aa9.36□□□□□ -0.91
SNORA40.12-201ENST00000516329 LHX8Q68G74 356 aa9.36□□□□□ -0.91
SNORA40.12-201ENST00000516329 PLCG2P16885 1265 aa9.35□□□□□ -0.91
SNORA40.12-201ENST00000516329 IRX5P78411 483 aaPredicted RBP9.34□□□□□ -0.91
SNORA40.12-201ENST00000516329 EFCAB3Q8N7B9 438 aa9.34□□□□□ -0.91
SNORA40.12-201ENST00000516329 POTEB2H3BUK9 544 aa9.33□□□□□ -0.92
SNORA40.12-201ENST00000516329 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.32□□□□□ -0.92
SNORA40.12-201ENST00000516329 CHGAP10645 457 aaKnown RBP9.3□□□□□ -0.92
SNORA40.12-201ENST00000516329 OCEL1Q9H607 264 aa9.3□□□□□ -0.92
SNORA40.12-201ENST00000516329 PDCD7Q8N8D1 485 aaKnown RBP9.28□□□□□ -0.92
SNORA40.12-201ENST00000516329 POTEJP0CG39 1038 aa9.27□□□□□ -0.93
SNORA40.12-201ENST00000516329 HS6ST3Q8IZP7 471 aa9.27□□□□□ -0.93
SNORA40.12-201ENST00000516329 PHF8Q9UPP1 1060 aa9.26□□□□□ -0.93
SNORA40.12-201ENST00000516329 DPY19L2Q6NUT2 758 aa9.24□□□□□ -0.93
SNORA40.12-201ENST00000516329 SOX12O15370 315 aa9.23□□□□□ -0.93
SNORA40.12-201ENST00000516329 ILDR1Q86SU0 546 aaPredicted RBP9.22□□□□□ -0.93
SNORA40.12-201ENST00000516329 OTUD5Q96G74 571 aa9.21□□□□□ -0.94
SNORA40.12-201ENST00000516329 MS4A4AQ96JQ5 239 aa9.2□□□□□ -0.94
SNORA40.12-201ENST00000516329 MFRPQ9BY79 579 aa9.2□□□□□ -0.94
SNORA40.12-201ENST00000516329 NLRP6P59044 892 aa9.19□□□□□ -0.94
SNORA40.12-201ENST00000516329 MAMSTRQ6ZN01 415 aa9.19□□□□□ -0.94
SNORA40.12-201ENST00000516329 SCUBE2Q9NQ36 999 aa9.19□□□□□ -0.94
SNORA40.12-201ENST00000516329 FBXO22Q8NEZ5 403 aa9.18□□□□□ -0.94
SNORA40.12-201ENST00000516329 L3MBTL3Q96JM7 780 aaPredicted RBP9.17□□□□□ -0.94
SNORA40.12-201ENST00000516329 G3V3G9 751 aa9.16□□□□□ -0.94
SNORA40.12-201ENST00000516329 NKX1-1Q15270 411 aaPredicted RBP9.16□□□□□ -0.94
SNORA40.12-201ENST00000516329 BOLA1Q9Y3E2 137 aa9.16□□□□□ -0.94
SNORA40.12-201ENST00000516329 C3orf67Q6ZVT6 689 aa9.14□□□□□ -0.95
SNORA40.12-201ENST00000516329 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.12□□□□□ -0.95
SNORA40.12-201ENST00000516329 MICALL2Q8IY33 904 aa9.11□□□□□ -0.95
SNORA40.12-201ENST00000516329 DNAJC5Q9H3Z4 198 aa9.11□□□□□ -0.95
SNORA40.12-201ENST00000516329 SLAIN1Q8ND83 568 aa9.1□□□□□ -0.95
SNORA40.12-201ENST00000516329 PPP1R37O75864 691 aa9.09□□□□□ -0.95
SNORA40.12-201ENST00000516329 TMEM121BQ9BXQ6 578 aaPredicted RBP9.07□□□□□ -0.96
SNORA40.12-201ENST00000516329 GTPBP6O43824 516 aaPredicted RBP9.04□□□□□ -0.96
SNORA40.12-201ENST00000516329 BBXQ8WY36 941 aaPredicted RBP9.04□□□□□ -0.96
SNORA40.12-201ENST00000516329 RYDENQ9NUL5 291 aaKnown RBP9.03□□□□□ -0.96
SNORA40.12-201ENST00000516329 TMEM92Q6UXU6 159 aa9.01□□□□□ -0.97
SNORA40.12-201ENST00000516329 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.99□□□□□ -0.97
SNORA40.12-201ENST00000516329 PAXIP1Q6ZW49 1069 aaPredicted RBP8.96□□□□□ -0.98
SNORA40.12-201ENST00000516329 CFAP44Q96MT7 982 aa8.96□□□□□ -0.98
SNORA40.12-201ENST00000516329 FAM163AQ96GL9 167 aaPredicted RBP8.95□□□□□ -0.98
SNORA40.12-201ENST00000516329 SPRYD3Q8NCJ5 442 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms