RNA–Protein interactions for RNA: ENST00000516257.1

RNU2-53P-201, Transcript of RNA, U2 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU2-53P, Length 147 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-53P-201ENST00000516257 TSPYL2Q9H2G4 693 aaPredicted RBP9.65□□□□□ -0.86
RNU2-53P-201ENST00000516257 METRNQ9UJH8 293 aa9.65□□□□□ -0.86
RNU2-53P-201ENST00000516257 POTEMA6NI47 508 aa9.62□□□□□ -0.87
RNU2-53P-201ENST00000516257 POTEJP0CG39 1038 aa9.62□□□□□ -0.87
RNU2-53P-201ENST00000516257 SLC39A7Q92504 469 aa9.61□□□□□ -0.87
RNU2-53P-201ENST00000516257 CCDC61Q9Y6R9 512 aa9.61□□□□□ -0.87
RNU2-53P-201ENST00000516257 C7P10643 843 aa9.58□□□□□ -0.88
RNU2-53P-201ENST00000516257 ATN1P54259 1190 aaPredicted RBP9.58□□□□□ -0.88
RNU2-53P-201ENST00000516257 POTEGQ6S5H5 508 aa9.57□□□□□ -0.88
RNU2-53P-201ENST00000516257 KIF12Q96FN5 646 aa9.55□□□□□ -0.88
RNU2-53P-201ENST00000516257 TRPC6Q9Y210 931 aa9.55□□□□□ -0.88
RNU2-53P-201ENST00000516257 POTEFA5A3E0 1075 aa9.52□□□□□ -0.89
RNU2-53P-201ENST00000516257 BMP2KQ9NSY1 1161 aaPredicted RBP9.52□□□□□ -0.89
RNU2-53P-201ENST00000516257 RASEFQ8IZ41 740 aa9.51□□□□□ -0.89
RNU2-53P-201ENST00000516257 MAP3K13O43283 966 aa9.5□□□□□ -0.89
RNU2-53P-201ENST00000516257 LCE2DQ5TA82 110 aaPredicted RBP9.5□□□□□ -0.89
RNU2-53P-201ENST00000516257 MAMSTRQ6ZN01 415 aa9.49□□□□□ -0.89
RNU2-53P-201ENST00000516257 MIER1Q8N108 512 aa9.47□□□□□ -0.89
RNU2-53P-201ENST00000516257 SCUBE2Q9NQ36 999 aa9.46□□□□□ -0.9
RNU2-53P-201ENST00000516257 TIE1P35590 1138 aa9.45□□□□□ -0.9
RNU2-53P-201ENST00000516257 PLEKHG5O94827 1062 aa9.44□□□□□ -0.9
RNU2-53P-201ENST00000516257 TTLL13PA6NNM8 815 aa9.42□□□□□ -0.9
RNU2-53P-201ENST00000516257 FAM163AQ96GL9 167 aaPredicted RBP9.42□□□□□ -0.9
RNU2-53P-201ENST00000516257 COLQQ9Y215 455 aaPredicted RBP9.41□□□□□ -0.9
RNU2-53P-201ENST00000516257 PLCD3Q8N3E9 789 aa9.38□□□□□ -0.91
RNU2-53P-201ENST00000516257 PCDH10Q9P2E7 1040 aa9.38□□□□□ -0.91
RNU2-53P-201ENST00000516257 SEC24BO95487 1268 aa9.36□□□□□ -0.91
RNU2-53P-201ENST00000516257 TRIM35Q9UPQ4 493 aa9.36□□□□□ -0.91
RNU2-53P-201ENST00000516257 PCDHB13Q9Y5F0 798 aa9.36□□□□□ -0.91
RNU2-53P-201ENST00000516257 NUBP1P53384 320 aa9.35□□□□□ -0.91
RNU2-53P-201ENST00000516257 IFNL1Q8IU54 200 aa9.32□□□□□ -0.92
RNU2-53P-201ENST00000516257 SGIP1Q9BQI5 828 aa9.32□□□□□ -0.92
RNU2-53P-201ENST00000516257 IER5LQ5T953 404 aa9.31□□□□□ -0.92
RNU2-53P-201ENST00000516257 ZBTB47Q9UFB7 747 aaPredicted RBP9.28□□□□□ -0.92
RNU2-53P-201ENST00000516257 TMEM106CQ9BVX2 250 aa9.27□□□□□ -0.93
RNU2-53P-201ENST00000516257 FAM212AQ96EL1 285 aa9.25□□□□□ -0.93
RNU2-53P-201ENST00000516257 SLAIN1Q8ND83 568 aa9.24□□□□□ -0.93
RNU2-53P-201ENST00000516257 FKBP8Q14318 412 aa9.22□□□□□ -0.93
RNU2-53P-201ENST00000516257 CDAN1Q8IWY9 1227 aa9.22□□□□□ -0.93
RNU2-53P-201ENST00000516257 PLCG2P16885 1265 aa9.21□□□□□ -0.94
RNU2-53P-201ENST00000516257 ST18O60284 1047 aa9.2□□□□□ -0.94
RNU2-53P-201ENST00000516257 IRX5P78411 483 aaPredicted RBP9.2□□□□□ -0.94
RNU2-53P-201ENST00000516257 PYGBP11216 843 aa9.18□□□□□ -0.94
RNU2-53P-201ENST00000516257 DCAF8Q5TAQ9 597 aa9.15□□□□□ -0.94
RNU2-53P-201ENST00000516257 PCDHB8Q9UN66 801 aa9.15□□□□□ -0.94
RNU2-53P-201ENST00000516257 OCEL1Q9H607 264 aa9.13□□□□□ -0.95
RNU2-53P-201ENST00000516257 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.06□□□□□ -0.96
RNU2-53P-201ENST00000516257 PDCD7Q8N8D1 485 aaKnown RBP9.05□□□□□ -0.96
RNU2-53P-201ENST00000516257 MARVELD3Q96A59 401 aa9.04□□□□□ -0.96
RNU2-53P-201ENST00000516257 TMEM121BQ9BXQ6 578 aaPredicted RBP9.04□□□□□ -0.96
RNU2-53P-201ENST00000516257 FBXO3Q9UK99 471 aa9.02□□□□□ -0.97
RNU2-53P-201ENST00000516257 SNPHO15079 494 aa9.01□□□□□ -0.97
RNU2-53P-201ENST00000516257 MMRN1Q13201 1228 aa9□□□□□ -0.97
RNU2-53P-201ENST00000516257 SPNS2Q8IVW8 549 aa9□□□□□ -0.97
RNU2-53P-201ENST00000516257 VASPP50552 380 aaPredicted RBP8.99□□□□□ -0.97
RNU2-53P-201ENST00000516257 ZNF467Q7Z7K2 595 aaPredicted RBP8.99□□□□□ -0.97
RNU2-53P-201ENST00000516257 KLHL34Q8N239 644 aa8.99□□□□□ -0.97
RNU2-53P-201ENST00000516257 GSE1Q14687 1217 aa8.98□□□□□ -0.97
RNU2-53P-201ENST00000516257 C3orf67Q6ZVT6 689 aa8.98□□□□□ -0.97
RNU2-53P-201ENST00000516257 GOLGA2Q08379 1002 aa8.97□□□□□ -0.97
RNU2-53P-201ENST00000516257 MKRN3Q13064 507 aaKnown RBP8.97□□□□□ -0.97
RNU2-53P-201ENST00000516257 PSEN1P49768 467 aa8.95□□□□□ -0.98
RNU2-53P-201ENST00000516257 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.95□□□□□ -0.98
RNU2-53P-201ENST00000516257 L3MBTL3Q96JM7 780 aaPredicted RBP8.94□□□□□ -0.98
RNU2-53P-201ENST00000516257 CHRM1P11229 460 aaPredicted RBP8.93□□□□□ -0.98
RNU2-53P-201ENST00000516257 EMP3P54852 163 aa8.93□□□□□ -0.98
RNU2-53P-201ENST00000516257 POTEB3A0JP26 581 aa8.92□□□□□ -0.98
RNU2-53P-201ENST00000516257 POTEBQ6S5H4 581 aa8.92□□□□□ -0.98
RNU2-53P-201ENST00000516257 DPY19L2Q6NUT2 758 aa8.91□□□□□ -0.98
RNU2-53P-201ENST00000516257 ILDR1Q86SU0 546 aaPredicted RBP8.89□□□□□ -0.99
RNU2-53P-201ENST00000516257 HS3ST6Q96QI5 342 aa8.89□□□□□ -0.99
RNU2-53P-201ENST00000516257 KRTAP3-3Q9BYR6 98 aa8.89□□□□□ -0.99
RNU2-53P-201ENST00000516257 KRTAP3-2Q9BYR7 98 aa8.89□□□□□ -0.99
RNU2-53P-201ENST00000516257 PDAP1Q13442 181 aaKnown RBP8.88□□□□□ -0.99
RNU2-53P-201ENST00000516257 FAM205CA6NFA0 338 aa8.87□□□□□ -0.99
RNU2-53P-201ENST00000516257 CABP2Q9NPB3 220 aa8.86□□□□□ -0.99
RNU2-53P-201ENST00000516257 HOXB3P14651 431 aaPredicted RBP8.82□□□□□ -1
RNU2-53P-201ENST00000516257 IFNLR1Q8IU57 520 aaPredicted RBP8.82□□□□□ -1
RNU2-53P-201ENST00000516257 CIZ1Q9ULV3 898 aaPredicted RBP8.82□□□□□ -1
RNU2-53P-201ENST00000516257 BOLA1Q9Y3E2 137 aa8.82□□□□□ -1
RNU2-53P-201ENST00000516257 SPOCK2Q92563 424 aa8.8□□□□□ -1
RNU2-53P-201ENST00000516257 G3V3G9 751 aa8.78□□□□□ -1
RNU2-53P-201ENST00000516257 HOXB1P14653 301 aaPredicted RBP8.75□□□□□ -1.01
RNU2-53P-201ENST00000516257 ZNF710Q8N1W2 664 aa8.73□□□□□ -1.01
RNU2-53P-201ENST00000516257 EFCAB3Q8N7B9 438 aa8.73□□□□□ -1.01
RNU2-53P-201ENST00000516257 DOK7Q18PE1 504 aa8.71□□□□□ -1.02
RNU2-53P-201ENST00000516257 ERBB3P21860 1342 aa8.71□□□□□ -1.02
RNU2-53P-201ENST00000516257 TMEM92Q6UXU6 159 aa8.69□□□□□ -1.02
RNU2-53P-201ENST00000516257 MICALL2Q8IY33 904 aa8.67□□□□□ -1.02
RNU2-53P-201ENST00000516257 VARS2Q5ST30 1063 aaKnown RBP8.66□□□□□ -1.02
RNU2-53P-201ENST00000516257 RIMBP2O15034 1052 aa8.64□□□□□ -1.03
RNU2-53P-201ENST00000516257 RNF166Q96A37 237 aaPredicted RBP8.63□□□□□ -1.03
RNU2-53P-201ENST00000516257 MS4A4AQ96JQ5 239 aa8.63□□□□□ -1.03
RNU2-53P-201ENST00000516257 TRIM41Q8WV44 630 aa8.62□□□□□ -1.03
RNU2-53P-201ENST00000516257 RNF25Q96BH1 459 aaPredicted RBP8.62□□□□□ -1.03
RNU2-53P-201ENST00000516257 GPR153Q6NV75 609 aa8.6□□□□□ -1.03
RNU2-53P-201ENST00000516257 PHF8Q9UPP1 1060 aa8.6□□□□□ -1.03
RNU2-53P-201ENST00000516257 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.59□□□□□ -1.03
RNU2-53P-201ENST00000516257 ZFP91Q96JP5 570 aaPredicted RBP8.59□□□□□ -1.03
RNU2-53P-201ENST00000516257 ZSWIM6Q9HCJ5 1215 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms