RNA–Protein interactions for RNA: ENST00000515980.2

RNU4-57P-201, Transcript of RNA, U4 small nuclear 57, pseudogene, humanhuman

BASIC

Gene RNU4-57P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-57P-201ENST00000515980 ASTLQ6HA08 431 aaPredicted RBP8.22□□□□□ -1.09
RNU4-57P-201ENST00000515980 SLC4A1APQ9BWU0 796 aaKnown RBP8.22□□□□□ -1.09
RNU4-57P-201ENST00000515980 ATMINO43313 823 aaPredicted RBP8.2□□□□□ -1.1
RNU4-57P-201ENST00000515980 SPNS2Q8IVW8 549 aa8.18□□□□□ -1.1
RNU4-57P-201ENST00000515980 CREBZFQ9NS37 354 aa8.15□□□□□ -1.1
RNU4-57P-201ENST00000515980 MS4A3Q96HJ5 214 aa8.14□□□□□ -1.11
RNU4-57P-201ENST00000515980 ZBTB22O15209 634 aa8.12□□□□□ -1.11
RNU4-57P-201ENST00000515980 ST18O60284 1047 aa8.07□□□□□ -1.12
RNU4-57P-201ENST00000515980 ATN1P54259 1190 aaPredicted RBP8.07□□□□□ -1.12
RNU4-57P-201ENST00000515980 NPM1P06748 294 aaKnown RBP eCLIP8.04□□□□□ -1.12
RNU4-57P-201ENST00000515980 POTEFA5A3E0 1075 aa8.02□□□□□ -1.13
RNU4-57P-201ENST00000515980 SEC24BO95487 1268 aa8□□□□□ -1.13
RNU4-57P-201ENST00000515980 SLAIN1Q8ND83 568 aa7.99□□□□□ -1.13
RNU4-57P-201ENST00000515980 STAG3Q9UJ98 1225 aa7.99□□□□□ -1.13
RNU4-57P-201ENST00000515980 BMP2KQ9NSY1 1161 aaPredicted RBP7.94□□□□□ -1.14
RNU4-57P-201ENST00000515980 COLQQ9Y215 455 aaPredicted RBP7.94□□□□□ -1.14
RNU4-57P-201ENST00000515980 TMEM121BQ9BXQ6 578 aaPredicted RBP7.93□□□□□ -1.14
RNU4-57P-201ENST00000515980 MARVELD3Q96A59 401 aa7.9□□□□□ -1.14
RNU4-57P-201ENST00000515980 TSPYL2Q9H2G4 693 aaPredicted RBP7.88□□□□□ -1.15
RNU4-57P-201ENST00000515980 TRPC6Q9Y210 931 aa7.86□□□□□ -1.15
RNU4-57P-201ENST00000515980 TIE1P35590 1138 aa7.85□□□□□ -1.15
RNU4-57P-201ENST00000515980 MNX1P50219 401 aaPredicted RBP7.85□□□□□ -1.15
RNU4-57P-201ENST00000515980 SNPHO15079 494 aa7.83□□□□□ -1.16
RNU4-57P-201ENST00000515980 KIF12Q96FN5 646 aa7.82□□□□□ -1.16
RNU4-57P-201ENST00000515980 CCDC61Q9Y6R9 512 aa7.81□□□□□ -1.16
RNU4-57P-201ENST00000515980 TTLL13PA6NNM8 815 aa7.8□□□□□ -1.16
RNU4-57P-201ENST00000515980 IER5LQ5T953 404 aa7.8□□□□□ -1.16
RNU4-57P-201ENST00000515980 EMP3P54852 163 aa7.79□□□□□ -1.16
RNU4-57P-201ENST00000515980 KRTAP3-3Q9BYR6 98 aa7.77□□□□□ -1.17
RNU4-57P-201ENST00000515980 KRTAP3-2Q9BYR7 98 aa7.77□□□□□ -1.17
RNU4-57P-201ENST00000515980 TRIM35Q9UPQ4 493 aa7.77□□□□□ -1.17
RNU4-57P-201ENST00000515980 MAP3K13O43283 966 aa7.75□□□□□ -1.17
RNU4-57P-201ENST00000515980 PLCG2P16885 1265 aa7.74□□□□□ -1.17
RNU4-57P-201ENST00000515980 HS3ST6Q96QI5 342 aa7.72□□□□□ -1.17
RNU4-57P-201ENST00000515980 FAM205CA6NFA0 338 aa7.71□□□□□ -1.18
RNU4-57P-201ENST00000515980 RNF166Q96A37 237 aaPredicted RBP7.7□□□□□ -1.18
RNU4-57P-201ENST00000515980 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.69□□□□□ -1.18
RNU4-57P-201ENST00000515980 POTEB3A0JP26 581 aa7.66□□□□□ -1.18
RNU4-57P-201ENST00000515980 POTEBQ6S5H4 581 aa7.66□□□□□ -1.18
RNU4-57P-201ENST00000515980 PCDHB13Q9Y5F0 798 aa7.6□□□□□ -1.19
RNU4-57P-201ENST00000515980 SPDYE4A6NLX3 237 aa7.59□□□□□ -1.19
RNU4-57P-201ENST00000515980 IRX5P78411 483 aaPredicted RBP7.59□□□□□ -1.19
RNU4-57P-201ENST00000515980 TMEM106CQ9BVX2 250 aa7.59□□□□□ -1.19
RNU4-57P-201ENST00000515980 MYT1LQ9UL68 1186 aa7.59□□□□□ -1.19
RNU4-57P-201ENST00000515980 OCEL1Q9H607 264 aa7.56□□□□□ -1.2
RNU4-57P-201ENST00000515980 C3orf67Q6ZVT6 689 aa7.55□□□□□ -1.2
RNU4-57P-201ENST00000515980 SGIP1Q9BQI5 828 aa7.54□□□□□ -1.2
RNU4-57P-201ENST00000515980 RASEFQ8IZ41 740 aa7.53□□□□□ -1.2
RNU4-57P-201ENST00000515980 IFNL1Q8IU54 200 aa7.5□□□□□ -1.21
RNU4-57P-201ENST00000515980 PLEKHG5O94827 1062 aa7.47□□□□□ -1.21
RNU4-57P-201ENST00000515980 ERBB3P21860 1342 aa7.46□□□□□ -1.22
RNU4-57P-201ENST00000515980 PTGER2P43116 358 aa7.41□□□□□ -1.22
RNU4-57P-201ENST00000515980 PLA2G2EQ9NZK7 142 aa7.41□□□□□ -1.22
RNU4-57P-201ENST00000515980 ZNF710Q8N1W2 664 aa7.4□□□□□ -1.22
RNU4-57P-201ENST00000515980 L3MBTL3Q96JM7 780 aaPredicted RBP7.4□□□□□ -1.22
RNU4-57P-201ENST00000515980 VARS2Q5ST30 1063 aaKnown RBP7.37□□□□□ -1.23
RNU4-57P-201ENST00000515980 MIER1Q8N108 512 aa7.37□□□□□ -1.23
RNU4-57P-201ENST00000515980 HOXB1P14653 301 aaPredicted RBP7.36□□□□□ -1.23
RNU4-57P-201ENST00000515980 PDCD7Q8N8D1 485 aaKnown RBP7.34□□□□□ -1.23
RNU4-57P-201ENST00000515980 HOXB3P14651 431 aaPredicted RBP7.33□□□□□ -1.24
RNU4-57P-201ENST00000515980 CSRNP3Q8WYN3 585 aa7.33□□□□□ -1.24
RNU4-57P-201ENST00000515980 ANKRD13DQ6ZTN6 518 aa7.31□□□□□ -1.24
RNU4-57P-201ENST00000515980 GOLGA2Q08379 1002 aa7.3□□□□□ -1.24
RNU4-57P-201ENST00000515980 DOK7Q18PE1 504 aa7.3□□□□□ -1.24
RNU4-57P-201ENST00000515980 FAM212AQ96EL1 285 aa7.29□□□□□ -1.24
RNU4-57P-201ENST00000515980 MKRN3Q13064 507 aaKnown RBP7.28□□□□□ -1.24
RNU4-57P-201ENST00000515980 ZNF687Q8N1G0 1237 aa7.28□□□□□ -1.24
RNU4-57P-201ENST00000515980 PROM2Q8N271 834 aa7.28□□□□□ -1.24
RNU4-57P-201ENST00000515980 RIMBP2O15034 1052 aa7.27□□□□□ -1.25
RNU4-57P-201ENST00000515980 G3V3G9 751 aa7.25□□□□□ -1.25
RNU4-57P-201ENST00000515980 DCAF8Q5TAQ9 597 aa7.25□□□□□ -1.25
RNU4-57P-201ENST00000515980 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.25□□□□□ -1.25
RNU4-57P-201ENST00000515980 NUBP1P53384 320 aa7.23□□□□□ -1.25
RNU4-57P-201ENST00000515980 PLCD3Q8N3E9 789 aa7.23□□□□□ -1.25
RNU4-57P-201ENST00000515980 IRX2Q9BZI1 471 aaPredicted RBP7.23□□□□□ -1.25
RNU4-57P-201ENST00000515980 HCSTQ9UBK5 93 aa7.23□□□□□ -1.25
RNU4-57P-201ENST00000515980 PCDHB8Q9UN66 801 aa7.23□□□□□ -1.25
RNU4-57P-201ENST00000515980 ZBTB47Q9UFB7 747 aaPredicted RBP7.21□□□□□ -1.26
RNU4-57P-201ENST00000515980 PYGBP11216 843 aa7.19□□□□□ -1.26
RNU4-57P-201ENST00000515980 LSM11P83369 360 aaKnown RBP eCLIP7.17□□□□□ -1.26
RNU4-57P-201ENST00000515980 BOLA1Q9Y3E2 137 aa7.15□□□□□ -1.26
RNU4-57P-201ENST00000515980 DPY19L2Q6NUT2 758 aa7.14□□□□□ -1.27
RNU4-57P-201ENST00000515980 ZSWIM6Q9HCJ5 1215 aa7.13□□□□□ -1.27
RNU4-57P-201ENST00000515980 RGS20O76081 388 aa7.09□□□□□ -1.27
RNU4-57P-201ENST00000515980 GPR153Q6NV75 609 aa7.06□□□□□ -1.28
RNU4-57P-201ENST00000515980 ZNF467Q7Z7K2 595 aaPredicted RBP7.06□□□□□ -1.28
RNU4-57P-201ENST00000515980 Q6ZNB5 142 aa7.05□□□□□ -1.28
RNU4-57P-201ENST00000515980 ILDR1Q86SU0 546 aaPredicted RBP7.04□□□□□ -1.28
RNU4-57P-201ENST00000515980 ZNF316A6NFI3 1004 aaPredicted RBP7.03□□□□□ -1.28
RNU4-57P-201ENST00000515980 PBX2P40425 430 aa7.02□□□□□ -1.29
RNU4-57P-201ENST00000515980 PSEN1P49768 467 aa7.02□□□□□ -1.29
RNU4-57P-201ENST00000515980 ARSIQ5FYB1 569 aa7.02□□□□□ -1.29
RNU4-57P-201ENST00000515980 AXIN2Q9Y2T1 843 aa6.98□□□□□ -1.29
RNU4-57P-201ENST00000515980 KHSRPQ92945 711 aaKnown RBP eCLIP6.96□□□□□ -1.3
RNU4-57P-201ENST00000515980 CABP2Q9NPB3 220 aa6.96□□□□□ -1.3
RNU4-57P-201ENST00000515980 ADGRD1Q6QNK2 874 aa6.95□□□□□ -1.3
RNU4-57P-201ENST00000515980 KCTD12Q96CX2 325 aaKnown RBP6.95□□□□□ -1.3
RNU4-57P-201ENST00000515980 A0A0G2JS52 829 aa6.93□□□□□ -1.3
RNU4-57P-201ENST00000515980 POTEEQ6S8J3 1075 aa6.92□□□□□ -1.3
RNU4-57P-201ENST00000515980 TMEM92Q6UXU6 159 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms