RNA–Protein interactions for RNA: ENST00000515882.1

SLIT2-IT1-201, SLIT2 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene SLIT2-IT1, Length 601 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT2-IT1-201ENST00000515882 ATMINO43313 823 aaPredicted RBP12.33□□□□□ -0.44
SLIT2-IT1-201ENST00000515882 METRNQ9UJH8 293 aa12.33□□□□□ -0.44
SLIT2-IT1-201ENST00000515882 POTEGQ6S5H5 508 aa12.29□□□□□ -0.44
SLIT2-IT1-201ENST00000515882 MAMSTRQ6ZN01 415 aa12.29□□□□□ -0.44
SLIT2-IT1-201ENST00000515882 EHMT2Q96KQ7 1210 aa12.27□□□□□ -0.45
SLIT2-IT1-201ENST00000515882 PCDH10Q9P2E7 1040 aa12.27□□□□□ -0.45
SLIT2-IT1-201ENST00000515882 PROM2Q8N271 834 aa12.26□□□□□ -0.45
SLIT2-IT1-201ENST00000515882 CCDC61Q9Y6R9 512 aa12.23□□□□□ -0.45
SLIT2-IT1-201ENST00000515882 POTEJP0CG39 1038 aa12.22□□□□□ -0.45
SLIT2-IT1-201ENST00000515882 TSPYL2Q9H2G4 693 aaPredicted RBP12.22□□□□□ -0.45
SLIT2-IT1-201ENST00000515882 ATN1P54259 1190 aaPredicted RBP12.18□□□□□ -0.46
SLIT2-IT1-201ENST00000515882 KIF12Q96FN5 646 aa12.18□□□□□ -0.46
SLIT2-IT1-201ENST00000515882 SCUBE2Q9NQ36 999 aa12.17□□□□□ -0.46
SLIT2-IT1-201ENST00000515882 PLEKHG5O94827 1062 aa12.13□□□□□ -0.47
SLIT2-IT1-201ENST00000515882 TIE1P35590 1138 aa12.11□□□□□ -0.47
SLIT2-IT1-201ENST00000515882 BMP2KQ9NSY1 1161 aaPredicted RBP12.1□□□□□ -0.47
SLIT2-IT1-201ENST00000515882 LCE2DQ5TA82 110 aaPredicted RBP12.08□□□□□ -0.48
SLIT2-IT1-201ENST00000515882 POTEFA5A3E0 1075 aa12.07□□□□□ -0.48
SLIT2-IT1-201ENST00000515882 MAP3K13O43283 966 aa12.06□□□□□ -0.48
SLIT2-IT1-201ENST00000515882 FAM163AQ96GL9 167 aaPredicted RBP12.06□□□□□ -0.48
SLIT2-IT1-201ENST00000515882 MIER1Q8N108 512 aa12.04□□□□□ -0.48
SLIT2-IT1-201ENST00000515882 TRPC6Q9Y210 931 aa12.04□□□□□ -0.48
SLIT2-IT1-201ENST00000515882 RASEFQ8IZ41 740 aa12.01□□□□□ -0.49
SLIT2-IT1-201ENST00000515882 SGIP1Q9BQI5 828 aa12.01□□□□□ -0.49
SLIT2-IT1-201ENST00000515882 TTLL13PA6NNM8 815 aa11.98□□□□□ -0.49
SLIT2-IT1-201ENST00000515882 SEC24BO95487 1268 aa11.97□□□□□ -0.49
SLIT2-IT1-201ENST00000515882 IER5LQ5T953 404 aa11.97□□□□□ -0.49
SLIT2-IT1-201ENST00000515882 COLQQ9Y215 455 aaPredicted RBP11.95□□□□□ -0.5
SLIT2-IT1-201ENST00000515882 ZBTB47Q9UFB7 747 aaPredicted RBP11.92□□□□□ -0.5
SLIT2-IT1-201ENST00000515882 PLCD3Q8N3E9 789 aa11.9□□□□□ -0.5
SLIT2-IT1-201ENST00000515882 TRIM35Q9UPQ4 493 aa11.9□□□□□ -0.5
SLIT2-IT1-201ENST00000515882 PCDHB13Q9Y5F0 798 aa11.9□□□□□ -0.5
SLIT2-IT1-201ENST00000515882 NUBP1P53384 320 aa11.85□□□□□ -0.51
SLIT2-IT1-201ENST00000515882 CDAN1Q8IWY9 1227 aa11.83□□□□□ -0.52
SLIT2-IT1-201ENST00000515882 IFNL1Q8IU54 200 aa11.81□□□□□ -0.52
SLIT2-IT1-201ENST00000515882 SLAIN1Q8ND83 568 aa11.8□□□□□ -0.52
SLIT2-IT1-201ENST00000515882 FAM212AQ96EL1 285 aa11.8□□□□□ -0.52
SLIT2-IT1-201ENST00000515882 TMEM106CQ9BVX2 250 aa11.78□□□□□ -0.52
SLIT2-IT1-201ENST00000515882 PLCG2P16885 1265 aa11.77□□□□□ -0.53
SLIT2-IT1-201ENST00000515882 ST18O60284 1047 aa11.75□□□□□ -0.53
SLIT2-IT1-201ENST00000515882 IRX5P78411 483 aaPredicted RBP11.73□□□□□ -0.53
SLIT2-IT1-201ENST00000515882 OCEL1Q9H607 264 aa11.68□□□□□ -0.54
SLIT2-IT1-201ENST00000515882 TMEM121BQ9BXQ6 578 aaPredicted RBP11.67□□□□□ -0.54
SLIT2-IT1-201ENST00000515882 SNPHO15079 494 aa11.66□□□□□ -0.54
SLIT2-IT1-201ENST00000515882 DCAF8Q5TAQ9 597 aa11.62□□□□□ -0.55
SLIT2-IT1-201ENST00000515882 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.62□□□□□ -0.55
SLIT2-IT1-201ENST00000515882 PYGBP11216 843 aa11.58□□□□□ -0.56
SLIT2-IT1-201ENST00000515882 MMRN1Q13201 1228 aa11.55□□□□□ -0.56
SLIT2-IT1-201ENST00000515882 SPNS2Q8IVW8 549 aa11.55□□□□□ -0.56
SLIT2-IT1-201ENST00000515882 FKBP8Q14318 412 aa11.54□□□□□ -0.56
SLIT2-IT1-201ENST00000515882 PCDHB8Q9UN66 801 aa11.54□□□□□ -0.56
SLIT2-IT1-201ENST00000515882 FBXO3Q9UK99 471 aa11.52□□□□□ -0.57
SLIT2-IT1-201ENST00000515882 ZNF467Q7Z7K2 595 aaPredicted RBP11.5□□□□□ -0.57
SLIT2-IT1-201ENST00000515882 L3MBTL3Q96JM7 780 aaPredicted RBP11.5□□□□□ -0.57
SLIT2-IT1-201ENST00000515882 PDCD7Q8N8D1 485 aaKnown RBP11.49□□□□□ -0.57
SLIT2-IT1-201ENST00000515882 MARVELD3Q96A59 401 aa11.48□□□□□ -0.57
SLIT2-IT1-201ENST00000515882 GSE1Q14687 1217 aa11.47□□□□□ -0.57
SLIT2-IT1-201ENST00000515882 C3orf67Q6ZVT6 689 aa11.47□□□□□ -0.57
SLIT2-IT1-201ENST00000515882 GOLGA2Q08379 1002 aa11.46□□□□□ -0.57
SLIT2-IT1-201ENST00000515882 MKRN3Q13064 507 aaKnown RBP11.46□□□□□ -0.57
SLIT2-IT1-201ENST00000515882 CHRM1P11229 460 aaPredicted RBP11.44□□□□□ -0.58
SLIT2-IT1-201ENST00000515882 EMP3P54852 163 aa11.41□□□□□ -0.58
SLIT2-IT1-201ENST00000515882 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.39□□□□□ -0.59
SLIT2-IT1-201ENST00000515882 KLHL34Q8N239 644 aa11.37□□□□□ -0.59
SLIT2-IT1-201ENST00000515882 PSEN1P49768 467 aa11.36□□□□□ -0.59
SLIT2-IT1-201ENST00000515882 ILDR1Q86SU0 546 aaPredicted RBP11.36□□□□□ -0.59
SLIT2-IT1-201ENST00000515882 HS3ST6Q96QI5 342 aa11.34□□□□□ -0.59
SLIT2-IT1-201ENST00000515882 VASPP50552 380 aaPredicted RBP11.33□□□□□ -0.6
SLIT2-IT1-201ENST00000515882 KRTAP3-3Q9BYR6 98 aa11.32□□□□□ -0.6
SLIT2-IT1-201ENST00000515882 KRTAP3-2Q9BYR7 98 aa11.32□□□□□ -0.6
SLIT2-IT1-201ENST00000515882 FAM205CA6NFA0 338 aa11.31□□□□□ -0.6
SLIT2-IT1-201ENST00000515882 POTEB3A0JP26 581 aa11.3□□□□□ -0.6
SLIT2-IT1-201ENST00000515882 PDAP1Q13442 181 aaKnown RBP11.3□□□□□ -0.6
SLIT2-IT1-201ENST00000515882 POTEBQ6S5H4 581 aa11.3□□□□□ -0.6
SLIT2-IT1-201ENST00000515882 G3V3G9 751 aa11.25□□□□□ -0.61
SLIT2-IT1-201ENST00000515882 BOLA1Q9Y3E2 137 aa11.24□□□□□ -0.61
SLIT2-IT1-201ENST00000515882 DPY19L2Q6NUT2 758 aa11.23□□□□□ -0.61
SLIT2-IT1-201ENST00000515882 HOXB3P14651 431 aaPredicted RBP11.22□□□□□ -0.61
SLIT2-IT1-201ENST00000515882 HOXB1P14653 301 aaPredicted RBP11.2□□□□□ -0.62
SLIT2-IT1-201ENST00000515882 CABP2Q9NPB3 220 aa11.2□□□□□ -0.62
SLIT2-IT1-201ENST00000515882 DOK7Q18PE1 504 aa11.18□□□□□ -0.62
SLIT2-IT1-201ENST00000515882 ZNF710Q8N1W2 664 aa11.17□□□□□ -0.62
SLIT2-IT1-201ENST00000515882 SPOCK2Q92563 424 aa11.16□□□□□ -0.62
SLIT2-IT1-201ENST00000515882 ERBB3P21860 1342 aa11.13□□□□□ -0.63
SLIT2-IT1-201ENST00000515882 RIMBP2O15034 1052 aa11.12□□□□□ -0.63
SLIT2-IT1-201ENST00000515882 CIZ1Q9ULV3 898 aaPredicted RBP11.12□□□□□ -0.63
SLIT2-IT1-201ENST00000515882 IFNLR1Q8IU57 520 aaPredicted RBP11.07□□□□□ -0.64
SLIT2-IT1-201ENST00000515882 ZSWIM6Q9HCJ5 1215 aa11.07□□□□□ -0.64
SLIT2-IT1-201ENST00000515882 TRIM41Q8WV44 630 aa11.06□□□□□ -0.64
SLIT2-IT1-201ENST00000515882 RNF166Q96A37 237 aaPredicted RBP11.06□□□□□ -0.64
SLIT2-IT1-201ENST00000515882 EFCAB3Q8N7B9 438 aa11.03□□□□□ -0.64
SLIT2-IT1-201ENST00000515882 VARS2Q5ST30 1063 aaKnown RBP11.02□□□□□ -0.65
SLIT2-IT1-201ENST00000515882 ZNF687Q8N1G0 1237 aa11.01□□□□□ -0.65
SLIT2-IT1-201ENST00000515882 MYT1LQ9UL68 1186 aa11□□□□□ -0.65
SLIT2-IT1-201ENST00000515882 PTGER2P43116 358 aa10.99□□□□□ -0.65
SLIT2-IT1-201ENST00000515882 MICALL2Q8IY33 904 aa10.99□□□□□ -0.65
SLIT2-IT1-201ENST00000515882 SOX12O15370 315 aa10.97□□□□□ -0.65
SLIT2-IT1-201ENST00000515882 GPR153Q6NV75 609 aa10.96□□□□□ -0.65
SLIT2-IT1-201ENST00000515882 TMEM92Q6UXU6 159 aa10.96□□□□□ -0.65
SLIT2-IT1-201ENST00000515882 MS4A4AQ96JQ5 239 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 1027.6 ms