RNA–Protein interactions for RNA: ENST00000515863.1

ATR-210, Transcript of ATR serine/threonine kinase, humanhuman

TSL 2

Gene ATR, Length 641 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATR-210ENST00000515863 RASEFQ8IZ41 740 aa13.78□□□□□ -0.2
ATR-210ENST00000515863 CCDC61Q9Y6R9 512 aa13.76□□□□□ -0.21
ATR-210ENST00000515863 NUBP1P53384 320 aa13.71□□□□□ -0.21
ATR-210ENST00000515863 MS4A3Q96HJ5 214 aa13.71□□□□□ -0.21
ATR-210ENST00000515863 VASPP50552 380 aaPredicted RBP13.7□□□□□ -0.22
ATR-210ENST00000515863 KIF12Q96FN5 646 aa13.66□□□□□ -0.22
ATR-210ENST00000515863 FAM212AQ96EL1 285 aa13.62□□□□□ -0.23
ATR-210ENST00000515863 MAP3K13O43283 966 aa13.61□□□□□ -0.23
ATR-210ENST00000515863 LHX8Q68G74 356 aa13.61□□□□□ -0.23
ATR-210ENST00000515863 KLHL34Q8N239 644 aa13.61□□□□□ -0.23
ATR-210ENST00000515863 DCAF8Q5TAQ9 597 aa13.54□□□□□ -0.24
ATR-210ENST00000515863 ATMINO43313 823 aaPredicted RBP13.53□□□□□ -0.24
ATR-210ENST00000515863 ASTLQ6HA08 431 aaPredicted RBP13.53□□□□□ -0.24
ATR-210ENST00000515863 PELP1Q8IZL8 1130 aaKnown RBP13.53□□□□□ -0.24
ATR-210ENST00000515863 TRPC6Q9Y210 931 aa13.51□□□□□ -0.25
ATR-210ENST00000515863 PCDHB13Q9Y5F0 798 aa13.51□□□□□ -0.25
ATR-210ENST00000515863 SGIP1Q9BQI5 828 aa13.49□□□□□ -0.25
ATR-210ENST00000515863 IFNLR1Q8IU57 520 aaPredicted RBP13.48□□□□□ -0.25
ATR-210ENST00000515863 BMP2KQ9NSY1 1161 aaPredicted RBP13.47□□□□□ -0.25
ATR-210ENST00000515863 ATN1P54259 1190 aaPredicted RBP13.46□□□□□ -0.25
ATR-210ENST00000515863 PYGBP11216 843 aa13.45□□□□□ -0.26
ATR-210ENST00000515863 TIE1P35590 1138 aa13.44□□□□□ -0.26
ATR-210ENST00000515863 IFNL1Q8IU54 200 aa13.43□□□□□ -0.26
ATR-210ENST00000515863 GSE1Q14687 1217 aa13.42□□□□□ -0.26
ATR-210ENST00000515863 SLC39A7Q92504 469 aa13.42□□□□□ -0.26
ATR-210ENST00000515863 METRNQ9UJH8 293 aa13.42□□□□□ -0.26
ATR-210ENST00000515863 SPOCK2Q92563 424 aa13.41□□□□□ -0.26
ATR-210ENST00000515863 TTLL13PA6NNM8 815 aa13.39□□□□□ -0.27
ATR-210ENST00000515863 C7P10643 843 aa13.39□□□□□ -0.27
ATR-210ENST00000515863 POTEB2H3BUK9 544 aa13.37□□□□□ -0.27
ATR-210ENST00000515863 TMEM106CQ9BVX2 250 aa13.31□□□□□ -0.28
ATR-210ENST00000515863 CIZ1Q9ULV3 898 aaPredicted RBP13.31□□□□□ -0.28
ATR-210ENST00000515863 PCDHB8Q9UN66 801 aa13.31□□□□□ -0.28
ATR-210ENST00000515863 TRIM35Q9UPQ4 493 aa13.31□□□□□ -0.28
ATR-210ENST00000515863 CHRM1P11229 460 aaPredicted RBP13.26□□□□□ -0.29
ATR-210ENST00000515863 OTUD5Q96G74 571 aa13.26□□□□□ -0.29
ATR-210ENST00000515863 POTEFA5A3E0 1075 aa13.25□□□□□ -0.29
ATR-210ENST00000515863 ZNF467Q7Z7K2 595 aaPredicted RBP13.24□□□□□ -0.29
ATR-210ENST00000515863 SEC24BO95487 1268 aa13.22□□□□□ -0.29
ATR-210ENST00000515863 IER5LQ5T953 404 aa13.22□□□□□ -0.29
ATR-210ENST00000515863 POTEJP0CG39 1038 aa13.21□□□□□ -0.29
ATR-210ENST00000515863 COLQQ9Y215 455 aaPredicted RBP13.2□□□□□ -0.3
ATR-210ENST00000515863 MAMSTRQ6ZN01 415 aa13.14□□□□□ -0.31
ATR-210ENST00000515863 PSEN1P49768 467 aa13.12□□□□□ -0.31
ATR-210ENST00000515863 PLCG2P16885 1265 aa13.11□□□□□ -0.31
ATR-210ENST00000515863 IRX5P78411 483 aaPredicted RBP13.1□□□□□ -0.31
ATR-210ENST00000515863 TRIM41Q8WV44 630 aa13.1□□□□□ -0.31
ATR-210ENST00000515863 SCUBE2Q9NQ36 999 aa13.1□□□□□ -0.31
ATR-210ENST00000515863 PDAP1Q13442 181 aaKnown RBP13.09□□□□□ -0.31
ATR-210ENST00000515863 GOLGA2Q08379 1002 aa13.06□□□□□ -0.32
ATR-210ENST00000515863 OCEL1Q9H607 264 aa13.05□□□□□ -0.32
ATR-210ENST00000515863 MKRN3Q13064 507 aaKnown RBP13.03□□□□□ -0.32
ATR-210ENST00000515863 CABP2Q9NPB3 220 aa12.98□□□□□ -0.33
ATR-210ENST00000515863 RNF25Q96BH1 459 aaPredicted RBP12.95□□□□□ -0.34
ATR-210ENST00000515863 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.95□□□□□ -0.342e-11■■□□□ 13.5
ATR-210ENST00000515863 RIOK3O14730 519 aaKnown RBP12.94□□□□□ -0.34
ATR-210ENST00000515863 PDCD7Q8N8D1 485 aaKnown RBP12.94□□□□□ -0.34
ATR-210ENST00000515863 SLAIN1Q8ND83 568 aa12.89□□□□□ -0.35
ATR-210ENST00000515863 VGFO15240 615 aaPredicted RBP12.87□□□□□ -0.35
ATR-210ENST00000515863 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.86□□□□□ -0.35
ATR-210ENST00000515863 ILDR1Q86SU0 546 aaPredicted RBP12.86□□□□□ -0.35
ATR-210ENST00000515863 ZFP91Q96JP5 570 aaPredicted RBP12.86□□□□□ -0.35
ATR-210ENST00000515863 EFCAB3Q8N7B9 438 aa12.85□□□□□ -0.35
ATR-210ENST00000515863 L3MBTL3Q96JM7 780 aaPredicted RBP12.85□□□□□ -0.35
ATR-210ENST00000515863 ECM2O94769 699 aaPredicted RBP12.84□□□□□ -0.35
ATR-210ENST00000515863 FAM163AQ96GL9 167 aaPredicted RBP12.84□□□□□ -0.35
ATR-210ENST00000515863 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.84□□□□□ -0.35
ATR-210ENST00000515863 PKD2Q13563 968 aa12.82□□□□□ -0.36
ATR-210ENST00000515863 DPY19L2Q6NUT2 758 aa12.82□□□□□ -0.36
ATR-210ENST00000515863 POTEMA6NI47 508 aa12.8□□□□□ -0.36
ATR-210ENST00000515863 C3orf67Q6ZVT6 689 aa12.8□□□□□ -0.36
ATR-210ENST00000515863 LCE2DQ5TA82 110 aaPredicted RBP12.79□□□□□ -0.36
ATR-210ENST00000515863 POTEGQ6S5H5 508 aa12.78□□□□□ -0.36
ATR-210ENST00000515863 TAOK2Q9UL54 1235 aa12.78□□□□□ -0.36
ATR-210ENST00000515863 G3V3G9 751 aa12.74□□□□□ -0.37
ATR-210ENST00000515863 RGL2O15211 777 aa12.74□□□□□ -0.37
ATR-210ENST00000515863 BCL11BQ9C0K0 894 aaPredicted RBP12.74□□□□□ -0.37
ATR-210ENST00000515863 BOLA1Q9Y3E2 137 aa12.74□□□□□ -0.37
ATR-210ENST00000515863 CCDC180Q9P1Z9 1646 aa12.73□□□□□ -0.37
ATR-210ENST00000515863 SOX12O15370 315 aa12.72□□□□□ -0.37
ATR-210ENST00000515863 STK24Q9Y6E0 443 aa12.71□□□□□ -0.37
ATR-210ENST00000515863 STK25O00506 426 aa12.69□□□□□ -0.38
ATR-210ENST00000515863 PHF8Q9UPP1 1060 aa12.69□□□□□ -0.38
ATR-210ENST00000515863 ABCC9O60706 1549 aa12.68□□□□□ -0.38
ATR-210ENST00000515863 ST18O60284 1047 aa12.66□□□□□ -0.38
ATR-210ENST00000515863 MS4A4AQ96JQ5 239 aa12.66□□□□□ -0.38
ATR-210ENST00000515863 SNPHO15079 494 aa12.65□□□□□ -0.38
ATR-210ENST00000515863 TMEM121BQ9BXQ6 578 aaPredicted RBP12.64□□□□□ -0.39
ATR-210ENST00000515863 NLRP6P59044 892 aa12.61□□□□□ -0.39
ATR-210ENST00000515863 MICALL2Q8IY33 904 aa12.6□□□□□ -0.39
ATR-210ENST00000515863 FBXO22Q8NEZ5 403 aa12.58□□□□□ -0.4
ATR-210ENST00000515863 MFRPQ9BY79 579 aa12.57□□□□□ -0.4
ATR-210ENST00000515863 PCDH10Q9P2E7 1040 aa12.55□□□□□ -0.4
ATR-210ENST00000515863 PLSCR2Q9NRY7 297 aa12.53□□□□□ -0.4
ATR-210ENST00000515863 TMEM92Q6UXU6 159 aa12.5□□□□□ -0.41
ATR-210ENST00000515863 MARVELD3Q96A59 401 aa12.5□□□□□ -0.41
ATR-210ENST00000515863 HOXB3P14651 431 aaPredicted RBP12.46□□□□□ -0.41
ATR-210ENST00000515863 CDAN1Q8IWY9 1227 aa12.46□□□□□ -0.41
ATR-210ENST00000515863 HS6ST3Q8IZP7 471 aa12.46□□□□□ -0.41
ATR-210ENST00000515863 CHGAP10645 457 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms