RNA–Protein interactions for RNA: ENST00000515833.2

MATR3-226, Transcript of matrin 3, humanhuman

TSL 5

Gene MATR3, Length 1,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-226ENST00000515833 CCDC61Q9Y6R9 512 aa12.14□□□□□ -0.47
MATR3-226ENST00000515833 METRNQ9UJH8 293 aa12.13□□□□□ -0.47
MATR3-226ENST00000515833 MIER1Q8N108 512 aa12.1□□□□□ -0.47
MATR3-226ENST00000515833 SLC39A7Q92504 469 aa12.1□□□□□ -0.47
MATR3-226ENST00000515833 C7P10643 843 aa12.09□□□□□ -0.47
MATR3-226ENST00000515833 KIF12Q96FN5 646 aa12.09□□□□□ -0.47
MATR3-226ENST00000515833 PLSCR2Q9NRY7 297 aa12.08□□□□□ -0.48
MATR3-226ENST00000515833 POTEJP0CG39 1038 aa12.07□□□□□ -0.48
MATR3-226ENST00000515833 ATN1P54259 1190 aaPredicted RBP12.07□□□□□ -0.48
MATR3-226ENST00000515833 PLEKHG5O94827 1062 aa12.05□□□□□ -0.48
MATR3-226ENST00000515833 RASEFQ8IZ41 740 aa12.04□□□□□ -0.48
MATR3-226ENST00000515833 TRPC6Q9Y210 931 aa12.03□□□□□ -0.48
MATR3-226ENST00000515833 MAP3K13O43283 966 aa12.02□□□□□ -0.49
MATR3-226ENST00000515833 BMP2KQ9NSY1 1161 aaPredicted RBP12□□□□□ -0.49
MATR3-226ENST00000515833 POTEMA6NI47 508 aa11.99□□□□□ -0.49
MATR3-226ENST00000515833 PLCD3Q8N3E9 789 aa11.97□□□□□ -0.49
MATR3-226ENST00000515833 POTEGQ6S5H5 508 aa11.96□□□□□ -0.49
MATR3-226ENST00000515833 MAMSTRQ6ZN01 415 aa11.96□□□□□ -0.49
MATR3-226ENST00000515833 POTEFA5A3E0 1075 aa11.95□□□□□ -0.5
MATR3-226ENST00000515833 TIE1P35590 1138 aa11.94□□□□□ -0.5
MATR3-226ENST00000515833 SCUBE2Q9NQ36 999 aa11.9□□□□□ -0.5
MATR3-226ENST00000515833 TTLL13PA6NNM8 815 aa11.88□□□□□ -0.51
MATR3-226ENST00000515833 NUBP1P53384 320 aa11.88□□□□□ -0.51
MATR3-226ENST00000515833 COLQQ9Y215 455 aaPredicted RBP11.86□□□□□ -0.51
MATR3-226ENST00000515833 PCDHB13Q9Y5F0 798 aa11.86□□□□□ -0.51
MATR3-226ENST00000515833 FAM163AQ96GL9 167 aaPredicted RBP11.85□□□□□ -0.51
MATR3-226ENST00000515833 LCE2DQ5TA82 110 aaPredicted RBP11.84□□□□□ -0.51
MATR3-226ENST00000515833 ZBTB47Q9UFB7 747 aaPredicted RBP11.84□□□□□ -0.51
MATR3-226ENST00000515833 SEC24BO95487 1268 aa11.83□□□□□ -0.52
MATR3-226ENST00000515833 FKBP8Q14318 412 aa11.83□□□□□ -0.52
MATR3-226ENST00000515833 SGIP1Q9BQI5 828 aa11.83□□□□□ -0.52
MATR3-226ENST00000515833 TRIM35Q9UPQ4 493 aa11.81□□□□□ -0.52
MATR3-226ENST00000515833 IFNL1Q8IU54 200 aa11.8□□□□□ -0.52
MATR3-226ENST00000515833 FAM212AQ96EL1 285 aa11.77□□□□□ -0.53
MATR3-226ENST00000515833 IER5LQ5T953 404 aa11.76□□□□□ -0.53
MATR3-226ENST00000515833 PCDH10Q9P2E7 1040 aa11.76□□□□□ -0.53
MATR3-226ENST00000515833 TMEM106CQ9BVX2 250 aa11.73□□□□□ -0.53
MATR3-226ENST00000515833 DCAF8Q5TAQ9 597 aa11.69□□□□□ -0.54
MATR3-226ENST00000515833 PYGBP11216 843 aa11.66□□□□□ -0.54
MATR3-226ENST00000515833 PLCG2P16885 1265 aa11.64□□□□□ -0.55
MATR3-226ENST00000515833 SLAIN1Q8ND83 568 aa11.64□□□□□ -0.55
MATR3-226ENST00000515833 IRX5P78411 483 aaPredicted RBP11.62□□□□□ -0.55
MATR3-226ENST00000515833 PCDHB8Q9UN66 801 aa11.61□□□□□ -0.55
MATR3-226ENST00000515833 FBXO3Q9UK99 471 aa11.6□□□□□ -0.55
MATR3-226ENST00000515833 OCEL1Q9H607 264 aa11.56□□□□□ -0.56
MATR3-226ENST00000515833 ST18O60284 1047 aa11.55□□□□□ -0.56
MATR3-226ENST00000515833 CDAN1Q8IWY9 1227 aa11.55□□□□□ -0.56
MATR3-226ENST00000515833 KLHL34Q8N239 644 aa11.53□□□□□ -0.56
MATR3-226ENST00000515833 VASPP50552 380 aaPredicted RBP11.49□□□□□ -0.57
MATR3-226ENST00000515833 GSE1Q14687 1217 aa11.47□□□□□ -0.57
MATR3-226ENST00000515833 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.46□□□□□ -0.57
MATR3-226ENST00000515833 ZNF467Q7Z7K2 595 aaPredicted RBP11.44□□□□□ -0.58
MATR3-226ENST00000515833 PDCD7Q8N8D1 485 aaKnown RBP11.42□□□□□ -0.58
MATR3-226ENST00000515833 CHRM1P11229 460 aaPredicted RBP11.41□□□□□ -0.58
MATR3-226ENST00000515833 SNPHO15079 494 aa11.4□□□□□ -0.58
MATR3-226ENST00000515833 GOLGA2Q08379 1002 aa11.4□□□□□ -0.58
MATR3-226ENST00000515833 MKRN3Q13064 507 aaKnown RBP11.4□□□□□ -0.58
MATR3-226ENST00000515833 PSEN1P49768 467 aa11.38□□□□□ -0.59
MATR3-226ENST00000515833 TMEM121BQ9BXQ6 578 aaPredicted RBP11.37□□□□□ -0.59
MATR3-226ENST00000515833 MARVELD3Q96A59 401 aa11.36□□□□□ -0.59
MATR3-226ENST00000515833 L3MBTL3Q96JM7 780 aaPredicted RBP11.35□□□□□ -0.59
MATR3-226ENST00000515833 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.35□□□□□ -0.597e-8■■■□□ 17
MATR3-226ENST00000515833 C3orf67Q6ZVT6 689 aa11.34□□□□□ -0.59
MATR3-226ENST00000515833 PDAP1Q13442 181 aaKnown RBP11.29□□□□□ -0.6
MATR3-226ENST00000515833 IFNLR1Q8IU57 520 aaPredicted RBP11.29□□□□□ -0.6
MATR3-226ENST00000515833 CIZ1Q9ULV3 898 aaPredicted RBP11.29□□□□□ -0.6
MATR3-226ENST00000515833 DPY19L2Q6NUT2 758 aa11.28□□□□□ -0.6
MATR3-226ENST00000515833 SPOCK2Q92563 424 aa11.28□□□□□ -0.6
MATR3-226ENST00000515833 SPNS2Q8IVW8 549 aa11.27□□□□□ -0.61
MATR3-226ENST00000515833 ILDR1Q86SU0 546 aaPredicted RBP11.26□□□□□ -0.61
MATR3-226ENST00000515833 MMRN1Q13201 1228 aa11.25□□□□□ -0.61
MATR3-226ENST00000515833 CABP2Q9NPB3 220 aa11.25□□□□□ -0.61
MATR3-226ENST00000515833 EMP3P54852 163 aa11.23□□□□□ -0.61
MATR3-226ENST00000515833 POTEB3A0JP26 581 aa11.2□□□□□ -0.62
MATR3-226ENST00000515833 POTEBQ6S5H4 581 aa11.2□□□□□ -0.62
MATR3-226ENST00000515833 FAM205CA6NFA0 338 aa11.17□□□□□ -0.62
MATR3-226ENST00000515833 BOLA1Q9Y3E2 137 aa11.17□□□□□ -0.62
MATR3-226ENST00000515833 G3V3G9 751 aa11.16□□□□□ -0.62
MATR3-226ENST00000515833 HS3ST6Q96QI5 342 aa11.16□□□□□ -0.62
MATR3-226ENST00000515833 KRTAP3-3Q9BYR6 98 aa11.13□□□□□ -0.63
MATR3-226ENST00000515833 KRTAP3-2Q9BYR7 98 aa11.13□□□□□ -0.63
MATR3-226ENST00000515833 HOXB3P14651 431 aaPredicted RBP11.12□□□□□ -0.63
MATR3-226ENST00000515833 EFCAB3Q8N7B9 438 aa11.1□□□□□ -0.63
MATR3-226ENST00000515833 ZNF710Q8N1W2 664 aa11.05□□□□□ -0.64
MATR3-226ENST00000515833 TRIM41Q8WV44 630 aa11.05□□□□□ -0.64
MATR3-226ENST00000515833 HOXB1P14653 301 aaPredicted RBP11.04□□□□□ -0.64
MATR3-226ENST00000515833 DOK7Q18PE1 504 aa11.02□□□□□ -0.65
MATR3-226ENST00000515833 ERBB3P21860 1342 aa10.99□□□□□ -0.65
MATR3-226ENST00000515833 TMEM92Q6UXU6 159 aa10.98□□□□□ -0.65
MATR3-226ENST00000515833 MICALL2Q8IY33 904 aa10.98□□□□□ -0.65
MATR3-226ENST00000515833 RNF25Q96BH1 459 aaPredicted RBP10.97□□□□□ -0.65
MATR3-226ENST00000515833 RIOK3O14730 519 aaKnown RBP10.96□□□□□ -0.65
MATR3-226ENST00000515833 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.95□□□□□ -0.66
MATR3-226ENST00000515833 SOX12O15370 315 aa10.95□□□□□ -0.66
MATR3-226ENST00000515833 ZFP91Q96JP5 570 aaPredicted RBP10.95□□□□□ -0.66
MATR3-226ENST00000515833 MS4A4AQ96JQ5 239 aa10.95□□□□□ -0.66
MATR3-226ENST00000515833 RIMBP2O15034 1052 aa10.94□□□□□ -0.66
MATR3-226ENST00000515833 PHF8Q9UPP1 1060 aa10.93□□□□□ -0.66
MATR3-226ENST00000515833 VGFO15240 615 aaPredicted RBP10.91□□□□□ -0.66
MATR3-226ENST00000515833 VARS2Q5ST30 1063 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms