RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 TSPYL2Q9H2G4 693 aaPredicted RBP13.5□□□□□ -0.25
SMARCA5-203ENST00000515531 CD44P16070 742 aaKnown RBP13.48□□□□□ -0.25
SMARCA5-203ENST00000515531 RTN4Q9NQC3 1192 aaKnown RBP13.46□□□□□ -0.25
SMARCA5-203ENST00000515531 ZRANB1Q9UGI0 708 aa13.42□□□□□ -0.26
SMARCA5-203ENST00000515531 CLCN6P51797 869 aa13.41□□□□□ -0.26
SMARCA5-203ENST00000515531 PKD2Q13563 968 aa13.38□□□□□ -0.27
SMARCA5-203ENST00000515531 ECM2O94769 699 aaPredicted RBP13.37□□□□□ -0.27
SMARCA5-203ENST00000515531 TRIM41Q8WV44 630 aa13.37□□□□□ -0.27
SMARCA5-203ENST00000515531 GABBR2O75899 941 aa13.36□□□□□ -0.27
SMARCA5-203ENST00000515531 CCDC61Q9Y6R9 512 aa13.35□□□□□ -0.27
SMARCA5-203ENST00000515531 PYGBP11216 843 aa13.33□□□□□ -0.28
SMARCA5-203ENST00000515531 CHRM1P11229 460 aaPredicted RBP13.28□□□□□ -0.28
SMARCA5-203ENST00000515531 ZNF579Q8NAF0 562 aaKnown RBP13.27□□□□□ -0.29
SMARCA5-203ENST00000515531 PHF12Q96QT6 1004 aa13.25□□□□□ -0.29
SMARCA5-203ENST00000515531 KIF12Q96FN5 646 aa13.22□□□□□ -0.29
SMARCA5-203ENST00000515531 MAP3K13O43283 966 aa13.2□□□□□ -0.3
SMARCA5-203ENST00000515531 PCDHB13Q9Y5F0 798 aa13.2□□□□□ -0.3
SMARCA5-203ENST00000515531 LHX8Q68G74 356 aa13.19□□□□□ -0.3
SMARCA5-203ENST00000515531 RGL2O15211 777 aa13.18□□□□□ -0.3
SMARCA5-203ENST00000515531 DCAF8L2P0C7V8 631 aa13.18□□□□□ -0.3
SMARCA5-203ENST00000515531 SGIP1Q9BQI5 828 aa13.18□□□□□ -0.3
SMARCA5-203ENST00000515531 ZNF467Q7Z7K2 595 aaPredicted RBP13.17□□□□□ -0.3
SMARCA5-203ENST00000515531 RIOK3O14730 519 aaKnown RBP13.15□□□□□ -0.3
SMARCA5-203ENST00000515531 TAOK2Q9UL54 1235 aa13.14□□□□□ -0.31
SMARCA5-203ENST00000515531 RNF25Q96BH1 459 aaPredicted RBP13.12□□□□□ -0.31
SMARCA5-203ENST00000515531 PCDHB8Q9UN66 801 aa13.12□□□□□ -0.31
SMARCA5-203ENST00000515531 IFNL1Q8IU54 200 aa13.11□□□□□ -0.31
SMARCA5-203ENST00000515531 DCBLD2Q96PD2 775 aa13.11□□□□□ -0.31
SMARCA5-203ENST00000515531 MS4A3Q96HJ5 214 aa13.09□□□□□ -0.31
SMARCA5-203ENST00000515531 VGFO15240 615 aaPredicted RBP13.07□□□□□ -0.32
SMARCA5-203ENST00000515531 GALR2O43603 387 aaPredicted RBP13.06□□□□□ -0.32
SMARCA5-203ENST00000515531 PDAP1Q13442 181 aaKnown RBP13.03□□□□□ -0.32
SMARCA5-203ENST00000515531 PSEN1P49768 467 aa13.01□□□□□ -0.33
SMARCA5-203ENST00000515531 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.98□□□□□ -0.33
SMARCA5-203ENST00000515531 CHGAP10645 457 aaKnown RBP12.98□□□□□ -0.33
SMARCA5-203ENST00000515531 ZFP91Q96JP5 570 aaPredicted RBP12.98□□□□□ -0.33
SMARCA5-203ENST00000515531 STK25O00506 426 aa12.97□□□□□ -0.33
SMARCA5-203ENST00000515531 TRPC6Q9Y210 931 aa12.96□□□□□ -0.33
SMARCA5-203ENST00000515531 TIE1P35590 1138 aa12.95□□□□□ -0.34
SMARCA5-203ENST00000515531 TMEM106CQ9BVX2 250 aa12.95□□□□□ -0.34
SMARCA5-203ENST00000515531 POTEIP0CG38 1075 aa12.94□□□□□ -0.34
SMARCA5-203ENST00000515531 STK24Q9Y6E0 443 aa12.93□□□□□ -0.34
SMARCA5-203ENST00000515531 BCL11BQ9C0K0 894 aaPredicted RBP12.92□□□□□ -0.34
SMARCA5-203ENST00000515531 HS6ST3Q8IZP7 471 aa12.9□□□□□ -0.34
SMARCA5-203ENST00000515531 BMP2KQ9NSY1 1161 aaPredicted RBP12.9□□□□□ -0.34
SMARCA5-203ENST00000515531 TTLL13PA6NNM8 815 aa12.89□□□□□ -0.35
SMARCA5-203ENST00000515531 GOLGA2Q08379 1002 aa12.89□□□□□ -0.35
SMARCA5-203ENST00000515531 CABP2Q9NPB3 220 aa12.85□□□□□ -0.35
SMARCA5-203ENST00000515531 ATMINO43313 823 aaPredicted RBP12.84□□□□□ -0.35
SMARCA5-203ENST00000515531 ASTLQ6HA08 431 aaPredicted RBP12.84□□□□□ -0.35
SMARCA5-203ENST00000515531 TRIM35Q9UPQ4 493 aa12.83□□□□□ -0.36
SMARCA5-203ENST00000515531 ATN1P54259 1190 aaPredicted RBP12.82□□□□□ -0.36
SMARCA5-203ENST00000515531 MKRN3Q13064 507 aaKnown RBP12.81□□□□□ -0.36
SMARCA5-203ENST00000515531 BBXQ8WY36 941 aaPredicted RBP12.81□□□□□ -0.36
SMARCA5-203ENST00000515531 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.78□□□□□ -0.36
SMARCA5-203ENST00000515531 EFCAB3Q8N7B9 438 aa12.77□□□□□ -0.37
SMARCA5-203ENST00000515531 DNAJC5Q9H3Z4 198 aa12.76□□□□□ -0.37
SMARCA5-203ENST00000515531 SOX12O15370 315 aa12.73□□□□□ -0.37
SMARCA5-203ENST00000515531 PELP1Q8IZL8 1130 aaKnown RBP12.71□□□□□ -0.37
SMARCA5-203ENST00000515531 SLC39A7Q92504 469 aa12.71□□□□□ -0.37
SMARCA5-203ENST00000515531 IER5LQ5T953 404 aa12.7□□□□□ -0.38
SMARCA5-203ENST00000515531 NKX1-1Q15270 411 aaPredicted RBP12.68□□□□□ -0.38
SMARCA5-203ENST00000515531 RYDENQ9NUL5 291 aaKnown RBP12.68□□□□□ -0.38
SMARCA5-203ENST00000515531 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.68□□□□□ -0.383e-7■■■■■ 30.9
SMARCA5-203ENST00000515531 SEC24BO95487 1268 aa12.67□□□□□ -0.38
SMARCA5-203ENST00000515531 C7P10643 843 aa12.67□□□□□ -0.38
SMARCA5-203ENST00000515531 NLRP6P59044 892 aa12.67□□□□□ -0.38
SMARCA5-203ENST00000515531 SPRYD3Q8NCJ5 442 aa12.66□□□□□ -0.38
SMARCA5-203ENST00000515531 PHF8Q9UPP1 1060 aa12.66□□□□□ -0.38
SMARCA5-203ENST00000515531 PAXIP1Q6ZW49 1069 aaPredicted RBP12.65□□□□□ -0.38
SMARCA5-203ENST00000515531 CFAP44Q96MT7 982 aa12.65□□□□□ -0.38
SMARCA5-203ENST00000515531 MFRPQ9BY79 579 aa12.65□□□□□ -0.38
SMARCA5-203ENST00000515531 METRNQ9UJH8 293 aa12.64□□□□□ -0.39
SMARCA5-203ENST00000515531 PLCG2P16885 1265 aa12.63□□□□□ -0.39
SMARCA5-203ENST00000515531 OCEL1Q9H607 264 aa12.63□□□□□ -0.39
SMARCA5-203ENST00000515531 IRX5P78411 483 aaPredicted RBP12.62□□□□□ -0.39
SMARCA5-203ENST00000515531 MAMSTRQ6ZN01 415 aa12.62□□□□□ -0.39
SMARCA5-203ENST00000515531 GTPBP6O43824 516 aaPredicted RBP12.59□□□□□ -0.39
SMARCA5-203ENST00000515531 FBXO22Q8NEZ5 403 aa12.59□□□□□ -0.39
SMARCA5-203ENST00000515531 OTUD5Q96G74 571 aa12.58□□□□□ -0.4
SMARCA5-203ENST00000515531 PLCB2Q00722 1185 aa12.57□□□□□ -0.4
SMARCA5-203ENST00000515531 ILDR1Q86SU0 546 aaPredicted RBP12.57□□□□□ -0.4
SMARCA5-203ENST00000515531 COLQQ9Y215 455 aaPredicted RBP12.56□□□□□ -0.4
SMARCA5-203ENST00000515531 PDCD7Q8N8D1 485 aaKnown RBP12.54□□□□□ -0.4
SMARCA5-203ENST00000515531 MS4A4AQ96JQ5 239 aa12.54□□□□□ -0.4
SMARCA5-203ENST00000515531 G3V3G9 751 aa12.51□□□□□ -0.41
SMARCA5-203ENST00000515531 DPY19L2Q6NUT2 758 aa12.51□□□□□ -0.41
SMARCA5-203ENST00000515531 POTEFA5A3E0 1075 aa12.5□□□□□ -0.41
SMARCA5-203ENST00000515531 PLSCR2Q9NRY7 297 aa12.5□□□□□ -0.41
SMARCA5-203ENST00000515531 POTEB2H3BUK9 544 aa12.49□□□□□ -0.41
SMARCA5-203ENST00000515531 L3MBTL3Q96JM7 780 aaPredicted RBP12.49□□□□□ -0.41
SMARCA5-203ENST00000515531 SCUBE2Q9NQ36 999 aa12.49□□□□□ -0.41
SMARCA5-203ENST00000515531 PPP1R37O75864 691 aa12.48□□□□□ -0.41
SMARCA5-203ENST00000515531 PCDH10Q9P2E7 1040 aa12.45□□□□□ -0.42
SMARCA5-203ENST00000515531 BOLA1Q9Y3E2 137 aa12.45□□□□□ -0.42
SMARCA5-203ENST00000515531 HAP1P54257 671 aaPredicted RBP12.43□□□□□ -0.42
SMARCA5-203ENST00000515531 POTEMA6NI47 508 aa12.41□□□□□ -0.42
SMARCA5-203ENST00000515531 MICALL2Q8IY33 904 aa12.39□□□□□ -0.43
SMARCA5-203ENST00000515531 POTEGQ6S5H5 508 aa12.37□□□□□ -0.43
SMARCA5-203ENST00000515531 C3orf67Q6ZVT6 689 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms