RNA–Protein interactions for RNA: ENST00000515298.5

PAPD4-216, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 2

Gene PAPD4, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-216ENST00000515298 CCDC61Q9Y6R9 512 aa12.84□□□□□ -0.35
PAPD4-216ENST00000515298 ZNF579Q8NAF0 562 aaKnown RBP12.82□□□□□ -0.36
PAPD4-216ENST00000515298 CIZ1Q9ULV3 898 aaPredicted RBP12.82□□□□□ -0.36
PAPD4-216ENST00000515298 PHF12Q96QT6 1004 aa12.77□□□□□ -0.37
PAPD4-216ENST00000515298 SP7Q8TDD2 431 aaPredicted RBP12.74□□□□□ -0.37
PAPD4-216ENST00000515298 PKD2Q13563 968 aa12.73□□□□□ -0.37
PAPD4-216ENST00000515298 PYGBP11216 843 aa12.72□□□□□ -0.37
PAPD4-216ENST00000515298 KIF12Q96FN5 646 aa12.72□□□□□ -0.37
PAPD4-216ENST00000515298 CHRM1P11229 460 aaPredicted RBP12.71□□□□□ -0.37
PAPD4-216ENST00000515298 TRIM41Q8WV44 630 aa12.7□□□□□ -0.38
PAPD4-216ENST00000515298 CLCN6P51797 869 aa12.68□□□□□ -0.38
PAPD4-216ENST00000515298 MAP3K13O43283 966 aa12.67□□□□□ -0.38
PAPD4-216ENST00000515298 GABBR2O75899 941 aa12.66□□□□□ -0.38
PAPD4-216ENST00000515298 AMER1Q5JTC6 1135 aaPredicted RBP12.66□□□□□ -0.38
PAPD4-216ENST00000515298 SGIP1Q9BQI5 828 aa12.64□□□□□ -0.39
PAPD4-216ENST00000515298 RTN4Q9NQC3 1192 aaKnown RBP12.64□□□□□ -0.39
PAPD4-216ENST00000515298 ECM2O94769 699 aaPredicted RBP12.63□□□□□ -0.39
PAPD4-216ENST00000515298 MS4A3Q96HJ5 214 aa12.62□□□□□ -0.39
PAPD4-216ENST00000515298 PCDHB13Q9Y5F0 798 aa12.62□□□□□ -0.39
PAPD4-216ENST00000515298 GALR2O43603 387 aaPredicted RBP12.61□□□□□ -0.39
PAPD4-216ENST00000515298 IFNL1Q8IU54 200 aa12.58□□□□□ -0.4
PAPD4-216ENST00000515298 RNF25Q96BH1 459 aaPredicted RBP12.56□□□□□ -0.4
PAPD4-216ENST00000515298 PCDHB8Q9UN66 801 aa12.56□□□□□ -0.4
PAPD4-216ENST00000515298 ZNF467Q7Z7K2 595 aaPredicted RBP12.55□□□□□ -0.4
PAPD4-216ENST00000515298 RGL2O15211 777 aa12.53□□□□□ -0.4
PAPD4-216ENST00000515298 TRPC6Q9Y210 931 aa12.51□□□□□ -0.41
PAPD4-216ENST00000515298 RIOK3O14730 519 aaKnown RBP12.5□□□□□ -0.41
PAPD4-216ENST00000515298 TIE1P35590 1138 aa12.45□□□□□ -0.42
PAPD4-216ENST00000515298 PDAP1Q13442 181 aaKnown RBP12.44□□□□□ -0.42
PAPD4-216ENST00000515298 DCBLD2Q96PD2 775 aa12.43□□□□□ -0.42
PAPD4-216ENST00000515298 BMP2KQ9NSY1 1161 aaPredicted RBP12.43□□□□□ -0.42
PAPD4-216ENST00000515298 VGFO15240 615 aaPredicted RBP12.42□□□□□ -0.42
PAPD4-216ENST00000515298 PSEN1P49768 467 aa12.42□□□□□ -0.42
PAPD4-216ENST00000515298 POTEIP0CG38 1075 aa12.41□□□□□ -0.42
PAPD4-216ENST00000515298 TTLL13PA6NNM8 815 aa12.4□□□□□ -0.42
PAPD4-216ENST00000515298 ASTLQ6HA08 431 aaPredicted RBP12.4□□□□□ -0.42
PAPD4-216ENST00000515298 ATMINO43313 823 aaPredicted RBP12.39□□□□□ -0.43
PAPD4-216ENST00000515298 TMEM106CQ9BVX2 250 aa12.39□□□□□ -0.43
PAPD4-216ENST00000515298 TAOK2Q9UL54 1235 aa12.39□□□□□ -0.43
PAPD4-216ENST00000515298 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.37□□□□□ -0.43
PAPD4-216ENST00000515298 ZFP91Q96JP5 570 aaPredicted RBP12.37□□□□□ -0.43
PAPD4-216ENST00000515298 ATN1P54259 1190 aaPredicted RBP12.36□□□□□ -0.43
PAPD4-216ENST00000515298 PELP1Q8IZL8 1130 aaKnown RBP12.32□□□□□ -0.44
PAPD4-216ENST00000515298 TRIM35Q9UPQ4 493 aa12.31□□□□□ -0.44
PAPD4-216ENST00000515298 DCAF8L2P0C7V8 631 aa12.3□□□□□ -0.44
PAPD4-216ENST00000515298 STK25O00506 426 aa12.29□□□□□ -0.44
PAPD4-216ENST00000515298 BCL11BQ9C0K0 894 aaPredicted RBP12.29□□□□□ -0.44
PAPD4-216ENST00000515298 HS6ST3Q8IZP7 471 aa12.27□□□□□ -0.45
PAPD4-216ENST00000515298 CABP2Q9NPB3 220 aa12.27□□□□□ -0.45
PAPD4-216ENST00000515298 CHGAP10645 457 aaKnown RBP12.26□□□□□ -0.45
PAPD4-216ENST00000515298 STK24Q9Y6E0 443 aa12.26□□□□□ -0.45
PAPD4-216ENST00000515298 SLC39A7Q92504 469 aa12.23□□□□□ -0.45
PAPD4-216ENST00000515298 GOLGA2Q08379 1002 aa12.22□□□□□ -0.45
PAPD4-216ENST00000515298 IER5LQ5T953 404 aa12.21□□□□□ -0.45
PAPD4-216ENST00000515298 EFCAB3Q8N7B9 438 aa12.21□□□□□ -0.45
PAPD4-216ENST00000515298 C7P10643 843 aa12.2□□□□□ -0.46
PAPD4-216ENST00000515298 MKRN3Q13064 507 aaKnown RBP12.19□□□□□ -0.46
PAPD4-216ENST00000515298 METRNQ9UJH8 293 aa12.18□□□□□ -0.46
PAPD4-216ENST00000515298 DNAJC5Q9H3Z4 198 aa12.17□□□□□ -0.46
PAPD4-216ENST00000515298 IRX5P78411 483 aaPredicted RBP12.15□□□□□ -0.46
PAPD4-216ENST00000515298 POTEFA5A3E0 1075 aa12.14□□□□□ -0.47
PAPD4-216ENST00000515298 SOX12O15370 315 aa12.14□□□□□ -0.47
PAPD4-216ENST00000515298 ILDR1Q86SU0 546 aaPredicted RBP12.13□□□□□ -0.47
PAPD4-216ENST00000515298 COLQQ9Y215 455 aaPredicted RBP12.13□□□□□ -0.47
PAPD4-216ENST00000515298 NKX1-1Q15270 411 aaPredicted RBP12.11□□□□□ -0.47
PAPD4-216ENST00000515298 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.11□□□□□ -0.475e-7■□□□□ 10.4
PAPD4-216ENST00000515298 SEC24BO95487 1268 aa12.1□□□□□ -0.47
PAPD4-216ENST00000515298 MFRPQ9BY79 579 aa12.1□□□□□ -0.47
PAPD4-216ENST00000515298 OCEL1Q9H607 264 aa12.1□□□□□ -0.47
PAPD4-216ENST00000515298 PHF8Q9UPP1 1060 aa12.09□□□□□ -0.47
PAPD4-216ENST00000515298 PLCG2P16885 1265 aa12.08□□□□□ -0.48
PAPD4-216ENST00000515298 PDCD7Q8N8D1 485 aaKnown RBP12.08□□□□□ -0.48
PAPD4-216ENST00000515298 FBXO22Q8NEZ5 403 aa12.07□□□□□ -0.48
PAPD4-216ENST00000515298 BBXQ8WY36 941 aaPredicted RBP12.07□□□□□ -0.48
PAPD4-216ENST00000515298 NLRP6P59044 892 aa12.06□□□□□ -0.48
PAPD4-216ENST00000515298 MS4A4AQ96JQ5 239 aa12.05□□□□□ -0.48
PAPD4-216ENST00000515298 POTEB2H3BUK9 544 aa12.02□□□□□ -0.49
PAPD4-216ENST00000515298 DPY19L2Q6NUT2 758 aa12.02□□□□□ -0.49
PAPD4-216ENST00000515298 GTPBP6O43824 516 aaPredicted RBP11.98□□□□□ -0.49
PAPD4-216ENST00000515298 POTEJP0CG39 1038 aa11.97□□□□□ -0.49
PAPD4-216ENST00000515298 RYDENQ9NUL5 291 aaKnown RBP11.96□□□□□ -0.49
PAPD4-216ENST00000515298 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.96□□□□□ -0.49
PAPD4-216ENST00000515298 LHX8Q68G74 356 aa11.95□□□□□ -0.5
PAPD4-216ENST00000515298 L3MBTL3Q96JM7 780 aaPredicted RBP11.94□□□□□ -0.5
PAPD4-216ENST00000515298 PPP1R37O75864 691 aa11.93□□□□□ -0.5
PAPD4-216ENST00000515298 BOLA1Q9Y3E2 137 aa11.91□□□□□ -0.5
PAPD4-216ENST00000515298 SPRYD3Q8NCJ5 442 aa11.9□□□□□ -0.5
PAPD4-216ENST00000515298 TMEM121BQ9BXQ6 578 aaPredicted RBP11.9□□□□□ -0.5
PAPD4-216ENST00000515298 PAXIP1Q6ZW49 1069 aaPredicted RBP11.88□□□□□ -0.51
PAPD4-216ENST00000515298 MICALL2Q8IY33 904 aa11.87□□□□□ -0.51
PAPD4-216ENST00000515298 G3V3G9 751 aa11.86□□□□□ -0.51
PAPD4-216ENST00000515298 MAMSTRQ6ZN01 415 aa11.85□□□□□ -0.51
PAPD4-216ENST00000515298 CFAP44Q96MT7 982 aa11.85□□□□□ -0.51
PAPD4-216ENST00000515298 OTUD5Q96G74 571 aa11.83□□□□□ -0.52
PAPD4-216ENST00000515298 SCUBE2Q9NQ36 999 aa11.82□□□□□ -0.52
PAPD4-216ENST00000515298 C3orf67Q6ZVT6 689 aa11.8□□□□□ -0.52
PAPD4-216ENST00000515298 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.79□□□□□ -0.52
PAPD4-216ENST00000515298 PLCB2Q00722 1185 aa11.78□□□□□ -0.52
PAPD4-216ENST00000515298 TMEM92Q6UXU6 159 aa11.73□□□□□ -0.53
PAPD4-216ENST00000515298 SLAIN1Q8ND83 568 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms