RNA–Protein interactions for RNA: ENST00000514428.1

RERE-218, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 3

Gene RERE, Length 273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-218ENST00000514428 MS4A3Q96HJ5 214 aa8.48□□□□□ -1.05
RERE-218ENST00000514428 TSPYL2Q9H2G4 693 aaPredicted RBP8.48□□□□□ -1.05
RERE-218ENST00000514428 SGIP1Q9BQI5 828 aa8.47□□□□□ -1.05
RERE-218ENST00000514428 CCDC61Q9Y6R9 512 aa8.47□□□□□ -1.05
RERE-218ENST00000514428 PLCD3Q8N3E9 789 aa8.46□□□□□ -1.06
RERE-218ENST00000514428 METRNQ9UJH8 293 aa8.46□□□□□ -1.06
RERE-218ENST00000514428 ATMINO43313 823 aaPredicted RBP8.45□□□□□ -1.06
RERE-218ENST00000514428 TIE1P35590 1138 aa8.44□□□□□ -1.06
RERE-218ENST00000514428 KIF12Q96FN5 646 aa8.43□□□□□ -1.06
RERE-218ENST00000514428 SCUBE2Q9NQ36 999 aa8.43□□□□□ -1.06
RERE-218ENST00000514428 OTUD5Q96G74 571 aa8.42□□□□□ -1.06
RERE-218ENST00000514428 PLSCR2Q9NRY7 297 aa8.42□□□□□ -1.06
RERE-218ENST00000514428 PCDH10Q9P2E7 1040 aa8.4□□□□□ -1.06
RERE-218ENST00000514428 FAM212AQ96EL1 285 aa8.38□□□□□ -1.07
RERE-218ENST00000514428 FBXO3Q9UK99 471 aa8.38□□□□□ -1.07
RERE-218ENST00000514428 IER5LQ5T953 404 aa8.37□□□□□ -1.07
RERE-218ENST00000514428 PELP1Q8IZL8 1130 aaKnown RBP8.37□□□□□ -1.07
RERE-218ENST00000514428 POTEB2H3BUK9 544 aa8.36□□□□□ -1.07
RERE-218ENST00000514428 ATN1P54259 1190 aaPredicted RBP8.35□□□□□ -1.07
RERE-218ENST00000514428 MAP3K13O43283 966 aa8.34□□□□□ -1.07
RERE-218ENST00000514428 RASEFQ8IZ41 740 aa8.34□□□□□ -1.07
RERE-218ENST00000514428 BMP2KQ9NSY1 1161 aaPredicted RBP8.33□□□□□ -1.08
RERE-218ENST00000514428 SEC24BO95487 1268 aa8.32□□□□□ -1.08
RERE-218ENST00000514428 PCDHB13Q9Y5F0 798 aa8.32□□□□□ -1.08
RERE-218ENST00000514428 POTEMA6NI47 508 aa8.3□□□□□ -1.08
RERE-218ENST00000514428 FKBP8Q14318 412 aa8.29□□□□□ -1.08
RERE-218ENST00000514428 TTLL13PA6NNM8 815 aa8.28□□□□□ -1.08
RERE-218ENST00000514428 NUBP1P53384 320 aa8.28□□□□□ -1.08
RERE-218ENST00000514428 POTEGQ6S5H5 508 aa8.26□□□□□ -1.09
RERE-218ENST00000514428 TRIM35Q9UPQ4 493 aa8.25□□□□□ -1.09
RERE-218ENST00000514428 PLCG2P16885 1265 aa8.21□□□□□ -1.1
RERE-218ENST00000514428 GSE1Q14687 1217 aa8.21□□□□□ -1.1
RERE-218ENST00000514428 DCAF8Q5TAQ9 597 aa8.21□□□□□ -1.1
RERE-218ENST00000514428 POTEJP0CG39 1038 aa8.2□□□□□ -1.1
RERE-218ENST00000514428 TMEM106CQ9BVX2 250 aa8.2□□□□□ -1.1
RERE-218ENST00000514428 IFNL1Q8IU54 200 aa8.19□□□□□ -1.1
RERE-218ENST00000514428 TRPC6Q9Y210 931 aa8.19□□□□□ -1.1
RERE-218ENST00000514428 ZNF467Q7Z7K2 595 aaPredicted RBP8.17□□□□□ -1.1
RERE-218ENST00000514428 FAM163AQ96GL9 167 aaPredicted RBP8.17□□□□□ -1.1
RERE-218ENST00000514428 POTEFA5A3E0 1075 aa8.16□□□□□ -1.1
RERE-218ENST00000514428 SNPHO15079 494 aa8.15□□□□□ -1.1
RERE-218ENST00000514428 KLHL34Q8N239 644 aa8.15□□□□□ -1.1
RERE-218ENST00000514428 OCEL1Q9H607 264 aa8.15□□□□□ -1.1
RERE-218ENST00000514428 GOLGA2Q08379 1002 aa8.14□□□□□ -1.11
RERE-218ENST00000514428 LCE2DQ5TA82 110 aaPredicted RBP8.14□□□□□ -1.11
RERE-218ENST00000514428 COLQQ9Y215 455 aaPredicted RBP8.14□□□□□ -1.11
RERE-218ENST00000514428 SLAIN1Q8ND83 568 aa8.12□□□□□ -1.11
RERE-218ENST00000514428 CHRM1P11229 460 aaPredicted RBP8.11□□□□□ -1.11
RERE-218ENST00000514428 VASPP50552 380 aaPredicted RBP8.11□□□□□ -1.11
RERE-218ENST00000514428 IRX5P78411 483 aaPredicted RBP8.11□□□□□ -1.11
RERE-218ENST00000514428 PYGBP11216 843 aa8.1□□□□□ -1.11
RERE-218ENST00000514428 TMEM121BQ9BXQ6 578 aaPredicted RBP8.1□□□□□ -1.11
RERE-218ENST00000514428 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.09□□□□□ -1.11
RERE-218ENST00000514428 MKRN3Q13064 507 aaKnown RBP8.08□□□□□ -1.12
RERE-218ENST00000514428 L3MBTL3Q96JM7 780 aaPredicted RBP8.08□□□□□ -1.12
RERE-218ENST00000514428 C3orf67Q6ZVT6 689 aa8.03□□□□□ -1.12
RERE-218ENST00000514428 TRIM41Q8WV44 630 aa8.03□□□□□ -1.12
RERE-218ENST00000514428 PCDHB8Q9UN66 801 aa8.02□□□□□ -1.13
RERE-218ENST00000514428 G3V3G9 751 aa8.01□□□□□ -1.13
RERE-218ENST00000514428 CDAN1Q8IWY9 1227 aa8.01□□□□□ -1.13
RERE-218ENST00000514428 SPOCK2Q92563 424 aa8.01□□□□□ -1.13
RERE-218ENST00000514428 PDAP1Q13442 181 aaKnown RBP8□□□□□ -1.13
RERE-218ENST00000514428 ST18O60284 1047 aa7.99□□□□□ -1.13
RERE-218ENST00000514428 PSEN1P49768 467 aa7.98□□□□□ -1.13
RERE-218ENST00000514428 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.96□□□□□ -1.143e-12■■■■□ 21.2
RERE-218ENST00000514428 PDCD7Q8N8D1 485 aaKnown RBP7.94□□□□□ -1.14
RERE-218ENST00000514428 CIZ1Q9ULV3 898 aaPredicted RBP7.93□□□□□ -1.14
RERE-218ENST00000514428 ILDR1Q86SU0 546 aaPredicted RBP7.9□□□□□ -1.14
RERE-218ENST00000514428 TAOK2Q9UL54 1235 aa7.88□□□□□ -1.15
RERE-218ENST00000514428 RIMBP2O15034 1052 aa7.86□□□□□ -1.15
RERE-218ENST00000514428 EMP3P54852 163 aa7.86□□□□□ -1.15
RERE-218ENST00000514428 IFNLR1Q8IU57 520 aaPredicted RBP7.86□□□□□ -1.15
RERE-218ENST00000514428 CABP2Q9NPB3 220 aa7.86□□□□□ -1.15
RERE-218ENST00000514428 BOLA1Q9Y3E2 137 aa7.86□□□□□ -1.15
RERE-218ENST00000514428 DOK7Q18PE1 504 aa7.84□□□□□ -1.15
RERE-218ENST00000514428 ZNF710Q8N1W2 664 aa7.81□□□□□ -1.16
RERE-218ENST00000514428 SOX12O15370 315 aa7.8□□□□□ -1.16
RERE-218ENST00000514428 SPNS2Q8IVW8 549 aa7.79□□□□□ -1.16
RERE-218ENST00000514428 MARVELD3Q96A59 401 aa7.79□□□□□ -1.16
RERE-218ENST00000514428 MMRN1Q13201 1228 aa7.78□□□□□ -1.16
RERE-218ENST00000514428 ZSWIM6Q9HCJ5 1215 aa7.78□□□□□ -1.16
RERE-218ENST00000514428 VGFO15240 615 aaPredicted RBP7.77□□□□□ -1.17
RERE-218ENST00000514428 HS3ST6Q96QI5 342 aa7.77□□□□□ -1.17
RERE-218ENST00000514428 RIOK3O14730 519 aaKnown RBP7.76□□□□□ -1.17
RERE-218ENST00000514428 FAM205CA6NFA0 338 aa7.75□□□□□ -1.17
RERE-218ENST00000514428 HOXB1P14653 301 aaPredicted RBP7.75□□□□□ -1.17
RERE-218ENST00000514428 EFCAB3Q8N7B9 438 aa7.73□□□□□ -1.17
RERE-218ENST00000514428 DPY19L2Q6NUT2 758 aa7.72□□□□□ -1.17
RERE-218ENST00000514428 ERBB3P21860 1342 aa7.71□□□□□ -1.18
RERE-218ENST00000514428 HOXB3P14651 431 aaPredicted RBP7.7□□□□□ -1.18
RERE-218ENST00000514428 PTGER2P43116 358 aa7.7□□□□□ -1.18
RERE-218ENST00000514428 NLRP6P59044 892 aa7.69□□□□□ -1.18
RERE-218ENST00000514428 MICALL2Q8IY33 904 aa7.69□□□□□ -1.18
RERE-218ENST00000514428 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.66□□□□□ -1.18
RERE-218ENST00000514428 ZFP91Q96JP5 570 aaPredicted RBP7.66□□□□□ -1.18
RERE-218ENST00000514428 KRTAP3-3Q9BYR6 98 aa7.66□□□□□ -1.18
RERE-218ENST00000514428 KRTAP3-2Q9BYR7 98 aa7.66□□□□□ -1.18
RERE-218ENST00000514428 ZNF687Q8N1G0 1237 aa7.62□□□□□ -1.19
RERE-218ENST00000514428 POTEB3A0JP26 581 aa7.59□□□□□ -1.19
RERE-218ENST00000514428 VARS2Q5ST30 1063 aaKnown RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms