RNA–Protein interactions for RNA: ENST00000514352.5

CCSER1-212, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 2

Gene CCSER1, Length 493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-212ENST00000514352 PCDH10Q9P2E7 1040 aa11.5□□□□□ -0.57
CCSER1-212ENST00000514352 METRNQ9UJH8 293 aa11.48□□□□□ -0.57
CCSER1-212ENST00000514352 POTEGQ6S5H5 508 aa11.47□□□□□ -0.57
CCSER1-212ENST00000514352 ATMINO43313 823 aaPredicted RBP11.45□□□□□ -0.58
CCSER1-212ENST00000514352 MS4A3Q96HJ5 214 aa11.45□□□□□ -0.58
CCSER1-212ENST00000514352 TSPYL2Q9H2G4 693 aaPredicted RBP11.39□□□□□ -0.59
CCSER1-212ENST00000514352 SCUBE2Q9NQ36 999 aa11.38□□□□□ -0.59
CCSER1-212ENST00000514352 PLEKHG5O94827 1062 aa11.37□□□□□ -0.59
CCSER1-212ENST00000514352 EHMT2Q96KQ7 1210 aa11.36□□□□□ -0.59
CCSER1-212ENST00000514352 CCDC61Q9Y6R9 512 aa11.34□□□□□ -0.59
CCSER1-212ENST00000514352 POTEJP0CG39 1038 aa11.32□□□□□ -0.6
CCSER1-212ENST00000514352 ATN1P54259 1190 aaPredicted RBP11.32□□□□□ -0.6
CCSER1-212ENST00000514352 KIF12Q96FN5 646 aa11.31□□□□□ -0.6
CCSER1-212ENST00000514352 PROM2Q8N271 834 aa11.29□□□□□ -0.6
CCSER1-212ENST00000514352 FAM163AQ96GL9 167 aaPredicted RBP11.29□□□□□ -0.6
CCSER1-212ENST00000514352 TIE1P35590 1138 aa11.26□□□□□ -0.61
CCSER1-212ENST00000514352 MIER1Q8N108 512 aa11.24□□□□□ -0.61
CCSER1-212ENST00000514352 BMP2KQ9NSY1 1161 aaPredicted RBP11.24□□□□□ -0.61
CCSER1-212ENST00000514352 MAP3K13O43283 966 aa11.21□□□□□ -0.61
CCSER1-212ENST00000514352 SEC24BO95487 1268 aa11.21□□□□□ -0.61
CCSER1-212ENST00000514352 SGIP1Q9BQI5 828 aa11.18□□□□□ -0.62
CCSER1-212ENST00000514352 LCE2DQ5TA82 110 aaPredicted RBP11.17□□□□□ -0.62
CCSER1-212ENST00000514352 POTEFA5A3E0 1075 aa11.16□□□□□ -0.62
CCSER1-212ENST00000514352 IER5LQ5T953 404 aa11.15□□□□□ -0.62
CCSER1-212ENST00000514352 TTLL13PA6NNM8 815 aa11.14□□□□□ -0.63
CCSER1-212ENST00000514352 TRPC6Q9Y210 931 aa11.14□□□□□ -0.63
CCSER1-212ENST00000514352 RASEFQ8IZ41 740 aa11.13□□□□□ -0.63
CCSER1-212ENST00000514352 ZBTB47Q9UFB7 747 aaPredicted RBP11.13□□□□□ -0.63
CCSER1-212ENST00000514352 PLCD3Q8N3E9 789 aa11.1□□□□□ -0.63
CCSER1-212ENST00000514352 COLQQ9Y215 455 aaPredicted RBP11.09□□□□□ -0.63
CCSER1-212ENST00000514352 TRIM35Q9UPQ4 493 aa11.08□□□□□ -0.64
CCSER1-212ENST00000514352 PCDHB13Q9Y5F0 798 aa11.08□□□□□ -0.64
CCSER1-212ENST00000514352 CDAN1Q8IWY9 1227 aa11.05□□□□□ -0.64
CCSER1-212ENST00000514352 SLAIN1Q8ND83 568 aa11.01□□□□□ -0.65
CCSER1-212ENST00000514352 FAM212AQ96EL1 285 aa10.99□□□□□ -0.65
CCSER1-212ENST00000514352 PLCG2P16885 1265 aa10.98□□□□□ -0.65
CCSER1-212ENST00000514352 NUBP1P53384 320 aa10.97□□□□□ -0.65
CCSER1-212ENST00000514352 IFNL1Q8IU54 200 aa10.97□□□□□ -0.65
CCSER1-212ENST00000514352 TMEM106CQ9BVX2 250 aa10.97□□□□□ -0.65
CCSER1-212ENST00000514352 ST18O60284 1047 aa10.95□□□□□ -0.66
CCSER1-212ENST00000514352 SNPHO15079 494 aa10.92□□□□□ -0.66
CCSER1-212ENST00000514352 TMEM121BQ9BXQ6 578 aaPredicted RBP10.9□□□□□ -0.66
CCSER1-212ENST00000514352 OCEL1Q9H607 264 aa10.9□□□□□ -0.66
CCSER1-212ENST00000514352 IRX5P78411 483 aaPredicted RBP10.89□□□□□ -0.67
CCSER1-212ENST00000514352 DCAF8Q5TAQ9 597 aa10.85□□□□□ -0.67
CCSER1-212ENST00000514352 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.85□□□□□ -0.67
CCSER1-212ENST00000514352 PYGBP11216 843 aa10.78□□□□□ -0.68
CCSER1-212ENST00000514352 MMRN1Q13201 1228 aa10.77□□□□□ -0.69
CCSER1-212ENST00000514352 SPNS2Q8IVW8 549 aa10.77□□□□□ -0.69
CCSER1-212ENST00000514352 L3MBTL3Q96JM7 780 aaPredicted RBP10.74□□□□□ -0.69
CCSER1-212ENST00000514352 GOLGA2Q08379 1002 aa10.73□□□□□ -0.69
CCSER1-212ENST00000514352 FBXO3Q9UK99 471 aa10.73□□□□□ -0.69
CCSER1-212ENST00000514352 PCDHB8Q9UN66 801 aa10.72□□□□□ -0.69
CCSER1-212ENST00000514352 C3orf67Q6ZVT6 689 aa10.71□□□□□ -0.69
CCSER1-212ENST00000514352 MKRN3Q13064 507 aaKnown RBP10.7□□□□□ -0.7
CCSER1-212ENST00000514352 ZNF467Q7Z7K2 595 aaPredicted RBP10.7□□□□□ -0.7
CCSER1-212ENST00000514352 MARVELD3Q96A59 401 aa10.7□□□□□ -0.7
CCSER1-212ENST00000514352 FKBP8Q14318 412 aa10.69□□□□□ -0.7
CCSER1-212ENST00000514352 GSE1Q14687 1217 aa10.69□□□□□ -0.7
CCSER1-212ENST00000514352 EMP3P54852 163 aa10.65□□□□□ -0.7
CCSER1-212ENST00000514352 PDCD7Q8N8D1 485 aaKnown RBP10.64□□□□□ -0.71
CCSER1-212ENST00000514352 CHRM1P11229 460 aaPredicted RBP10.61□□□□□ -0.71
CCSER1-212ENST00000514352 KLHL34Q8N239 644 aa10.61□□□□□ -0.71
CCSER1-212ENST00000514352 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.61□□□□□ -0.71
CCSER1-212ENST00000514352 HS3ST6Q96QI5 342 aa10.57□□□□□ -0.72
CCSER1-212ENST00000514352 FAM205CA6NFA0 338 aa10.56□□□□□ -0.72
CCSER1-212ENST00000514352 G3V3G9 751 aa10.56□□□□□ -0.72
CCSER1-212ENST00000514352 PSEN1P49768 467 aa10.56□□□□□ -0.72
CCSER1-212ENST00000514352 KRTAP3-3Q9BYR6 98 aa10.51□□□□□ -0.73
CCSER1-212ENST00000514352 KRTAP3-2Q9BYR7 98 aa10.51□□□□□ -0.73
CCSER1-212ENST00000514352 PDAP1Q13442 181 aaKnown RBP10.5□□□□□ -0.73
CCSER1-212ENST00000514352 ILDR1Q86SU0 546 aaPredicted RBP10.5□□□□□ -0.73
CCSER1-212ENST00000514352 VASPP50552 380 aaPredicted RBP10.48□□□□□ -0.73
CCSER1-212ENST00000514352 POTEB3A0JP26 581 aa10.47□□□□□ -0.73
CCSER1-212ENST00000514352 POTEBQ6S5H4 581 aa10.47□□□□□ -0.73
CCSER1-212ENST00000514352 ZNF710Q8N1W2 664 aa10.46□□□□□ -0.73
CCSER1-212ENST00000514352 BOLA1Q9Y3E2 137 aa10.46□□□□□ -0.73
CCSER1-212ENST00000514352 DOK7Q18PE1 504 aa10.44□□□□□ -0.74
CCSER1-212ENST00000514352 HOXB1P14653 301 aaPredicted RBP10.42□□□□□ -0.74
CCSER1-212ENST00000514352 DPY19L2Q6NUT2 758 aa10.42□□□□□ -0.74
CCSER1-212ENST00000514352 CABP2Q9NPB3 220 aa10.42□□□□□ -0.74
CCSER1-212ENST00000514352 RIMBP2O15034 1052 aa10.41□□□□□ -0.74
CCSER1-212ENST00000514352 ERBB3P21860 1342 aa10.4□□□□□ -0.74
CCSER1-212ENST00000514352 HOXB3P14651 431 aaPredicted RBP10.4□□□□□ -0.74
CCSER1-212ENST00000514352 SPOCK2Q92563 424 aa10.36□□□□□ -0.75
CCSER1-212ENST00000514352 CIZ1Q9ULV3 898 aaPredicted RBP10.36□□□□□ -0.75
CCSER1-212ENST00000514352 RNF166Q96A37 237 aaPredicted RBP10.32□□□□□ -0.76
CCSER1-212ENST00000514352 ZSWIM6Q9HCJ5 1215 aa10.32□□□□□ -0.76
CCSER1-212ENST00000514352 VARS2Q5ST30 1063 aaKnown RBP10.28□□□□□ -0.76
CCSER1-212ENST00000514352 TRIM41Q8WV44 630 aa10.28□□□□□ -0.76
CCSER1-212ENST00000514352 MYT1LQ9UL68 1186 aa10.28□□□□□ -0.76
CCSER1-212ENST00000514352 PTGER2P43116 358 aa10.26□□□□□ -0.77
CCSER1-212ENST00000514352 ZNF687Q8N1G0 1237 aa10.26□□□□□ -0.77
CCSER1-212ENST00000514352 IFNLR1Q8IU57 520 aaPredicted RBP10.24□□□□□ -0.77
CCSER1-212ENST00000514352 EFCAB3Q8N7B9 438 aa10.24□□□□□ -0.77
CCSER1-212ENST00000514352 SOX12O15370 315 aa10.21□□□□□ -0.77
CCSER1-212ENST00000514352 MICALL2Q8IY33 904 aa10.2□□□□□ -0.78
CCSER1-212ENST00000514352 GPR153Q6NV75 609 aa10.19□□□□□ -0.78
CCSER1-212ENST00000514352 TMEM92Q6UXU6 159 aa10.14□□□□□ -0.79
CCSER1-212ENST00000514352 ANKRD13DQ6ZTN6 518 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms