RNA–Protein interactions for RNA: ENST00000513997.1

DDX60-205, Transcript of DExD/H-box helicase 60, humanhuman

TSL 3

Gene DDX60, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60-205ENST00000513997 PAXIP1Q6ZW49 1069 aaPredicted RBP16.07■□□□□ 0.16
DDX60-205ENST00000513997 HOMEZQ8IX15 550 aa16.07■□□□□ 0.16
DDX60-205ENST00000513997 MNX1P50219 401 aaPredicted RBP16.01■□□□□ 0.15
DDX60-205ENST00000513997 CFAP44Q96MT7 982 aa16■□□□□ 0.15
DDX60-205ENST00000513997 NPM1P06748 294 aaKnown RBP eCLIP15.93■□□□□ 0.14
DDX60-205ENST00000513997 NUBP1P53384 320 aa15.92■□□□□ 0.14
DDX60-205ENST00000513997 CHRDL2Q6WN34 429 aa15.92■□□□□ 0.14
DDX60-205ENST00000513997 CHADLQ6NUI6 762 aa15.91■□□□□ 0.14
DDX60-205ENST00000513997 FXR2P51116 673 aaKnown RBP eCLIP15.9■□□□□ 0.14
DDX60-205ENST00000513997 TSHZ2Q9NRE2 1034 aa15.89■□□□□ 0.13
DDX60-205ENST00000513997 NBR1Q14596 966 aa15.88■□□□□ 0.13
DDX60-205ENST00000513997 TMEM132AQ24JP5 1023 aa15.88■□□□□ 0.13
DDX60-205ENST00000513997 CIZ1Q9ULV3 898 aaPredicted RBP15.86■□□□□ 0.13
DDX60-205ENST00000513997 PRKAR2AP13861 404 aaKnown RBP15.84■□□□□ 0.13
DDX60-205ENST00000513997 ECM2O94769 699 aaPredicted RBP15.83■□□□□ 0.12
DDX60-205ENST00000513997 SPRYD3Q8NCJ5 442 aa15.82■□□□□ 0.12
DDX60-205ENST00000513997 PIP4P2Q8N4L2 257 aa15.8■□□□□ 0.12
DDX60-205ENST00000513997 FARP1Q9Y4F1 1045 aaPredicted RBP15.8■□□□□ 0.12
DDX60-205ENST00000513997 GSE1Q14687 1217 aa15.78■□□□□ 0.12
DDX60-205ENST00000513997 RASEFQ8IZ41 740 aa15.77■□□□□ 0.12
DDX60-205ENST00000513997 DCAF8Q5TAQ9 597 aa15.76■□□□□ 0.11
DDX60-205ENST00000513997 C14orf37Q86TY3 774 aa15.74■□□□□ 0.11
DDX60-205ENST00000513997 DNAJC5Q9H3Z4 198 aa15.74■□□□□ 0.11
DDX60-205ENST00000513997 FAM212AQ96EL1 285 aa15.73■□□□□ 0.11
DDX60-205ENST00000513997 TRIM41Q8WV44 630 aa15.71■□□□□ 0.11
DDX60-205ENST00000513997 RGL2O15211 777 aa15.69■□□□□ 0.1
DDX60-205ENST00000513997 CHRM1P11229 460 aaPredicted RBP15.58■□□□□ 0.08
DDX60-205ENST00000513997 TSPYL2Q9H2G4 693 aaPredicted RBP15.58■□□□□ 0.08
DDX60-205ENST00000513997 RNF25Q96BH1 459 aaPredicted RBP15.55■□□□□ 0.08
DDX60-205ENST00000513997 PYGBP11216 843 aa15.52■□□□□ 0.08
DDX60-205ENST00000513997 RANGAP1P46060 587 aaPredicted RBP15.51■□□□□ 0.07
DDX60-205ENST00000513997 CCDC61Q9Y6R9 512 aa15.47■□□□□ 0.07
DDX60-205ENST00000513997 RIOK3O14730 519 aaKnown RBP15.46■□□□□ 0.07
DDX60-205ENST00000513997 PAK3O75914 559 aaPredicted RBP15.44■□□□□ 0.06
DDX60-205ENST00000513997 PODXL2Q9NZ53 605 aa15.42■□□□□ 0.06
DDX60-205ENST00000513997 CHGAP10645 457 aaKnown RBP15.4■□□□□ 0.06
DDX60-205ENST00000513997 CD44P16070 742 aaKnown RBP15.39■□□□□ 0.05
DDX60-205ENST00000513997 ZRANB1Q9UGI0 708 aa15.36■□□□□ 0.05
DDX60-205ENST00000513997 VGFO15240 615 aaPredicted RBP15.35■□□□□ 0.05
DDX60-205ENST00000513997 C19orf67A6NJJ6 358 aa15.34■□□□□ 0.05
DDX60-205ENST00000513997 HS6ST3Q8IZP7 471 aa15.34■□□□□ 0.05
DDX60-205ENST00000513997 SGIP1Q9BQI5 828 aa15.32■□□□□ 0.04
DDX60-205ENST00000513997 ZNF467Q7Z7K2 595 aaPredicted RBP15.31■□□□□ 0.04
DDX60-205ENST00000513997 KIF12Q96FN5 646 aa15.31■□□□□ 0.04
DDX60-205ENST00000513997 SUPT5HO00267 1087 aaKnown RBP15.28■□□□□ 0.04
DDX60-205ENST00000513997 PCDHB8Q9UN66 801 aa15.28■□□□□ 0.04
DDX60-205ENST00000513997 PCDHB13Q9Y5F0 798 aa15.28■□□□□ 0.04
DDX60-205ENST00000513997 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.27■□□□□ 0.04
DDX60-205ENST00000513997 MAP3K13O43283 966 aa15.27■□□□□ 0.04
DDX60-205ENST00000513997 ZNF579Q8NAF0 562 aaKnown RBP15.27■□□□□ 0.04
DDX60-205ENST00000513997 ZFP91Q96JP5 570 aaPredicted RBP15.27■□□□□ 0.04
DDX60-205ENST00000513997 STK25O00506 426 aa15.25■□□□□ 0.03
DDX60-205ENST00000513997 PHF12Q96QT6 1004 aa15.25■□□□□ 0.03
DDX60-205ENST00000513997 IFNL1Q8IU54 200 aa15.23■□□□□ 0.03
DDX60-205ENST00000513997 PDAP1Q13442 181 aaKnown RBP15.2■□□□□ 0.02
DDX60-205ENST00000513997 BCL11BQ9C0K0 894 aaPredicted RBP15.2■□□□□ 0.02
DDX60-205ENST00000513997 HAX1O00165 279 aa15.18■□□□□ 0.02
DDX60-205ENST00000513997 STK24Q9Y6E0 443 aa15.18■□□□□ 0.02
DDX60-205ENST00000513997 PSEN1P49768 467 aa15.16■□□□□ 0.02
DDX60-205ENST00000513997 NKX1-1Q15270 411 aaPredicted RBP15.15■□□□□ 0.02
DDX60-205ENST00000513997 EVX2Q03828 476 aa15.14■□□□□ 0.01
DDX60-205ENST00000513997 POTEHQ6S545 545 aa15.08■□□□□ 0
DDX60-205ENST00000513997 MS4A3Q96HJ5 214 aa15.08■□□□□ 0
DDX60-205ENST00000513997 BRPF1P55201 1214 aaPredicted RBP15.07■□□□□ 0
DDX60-205ENST00000513997 GTPBP6O43824 516 aaPredicted RBP15.03■□□□□ -0
DDX60-205ENST00000513997 TRPC6Q9Y210 931 aa15.02■□□□□ -0
DDX60-205ENST00000513997 UBTFP17480 764 aaKnown RBP15.01□□□□□ -0.01
DDX60-205ENST00000513997 TRIM26Q12899 539 aaPredicted RBP14.99□□□□□ -0.01
DDX60-205ENST00000513997 NPM2Q86SE8 214 aaKnown RBP14.99□□□□□ -0.01
DDX60-205ENST00000513997 GALR2O43603 387 aaPredicted RBP14.97□□□□□ -0.01
DDX60-205ENST00000513997 CLCN6P51797 869 aa14.97□□□□□ -0.01
DDX60-205ENST00000513997 TMEM106CQ9BVX2 250 aa14.95□□□□□ -0.02
DDX60-205ENST00000513997 CABP2Q9NPB3 220 aa14.95□□□□□ -0.02
DDX60-205ENST00000513997 LMOD2Q6P5Q4 547 aa14.94□□□□□ -0.02
DDX60-205ENST00000513997 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.92□□□□□ -0.02
DDX60-205ENST00000513997 EFCAB3Q8N7B9 438 aa14.92□□□□□ -0.02
DDX60-205ENST00000513997 RYDENQ9NUL5 291 aaKnown RBP14.92□□□□□ -0.02
DDX60-205ENST00000513997 TIE1P35590 1138 aa14.91□□□□□ -0.02
DDX60-205ENST00000513997 P3H3Q8IVL6 736 aa14.9□□□□□ -0.02
DDX60-205ENST00000513997 MFRPQ9BY79 579 aa14.9□□□□□ -0.02
DDX60-205ENST00000513997 TTLL13PA6NNM8 815 aa14.87□□□□□ -0.03
DDX60-205ENST00000513997 SOX12O15370 315 aa14.87□□□□□ -0.03
DDX60-205ENST00000513997 BMP2KQ9NSY1 1161 aaPredicted RBP14.87□□□□□ -0.03
DDX60-205ENST00000513997 GABBR2O75899 941 aa14.83□□□□□ -0.04
DDX60-205ENST00000513997 HRCP23327 699 aa14.83□□□□□ -0.04
DDX60-205ENST00000513997 NEUROD2Q15784 382 aa14.83□□□□□ -0.04
DDX60-205ENST00000513997 FBXO22Q8NEZ5 403 aa14.82□□□□□ -0.04
DDX60-205ENST00000513997 PHF8Q9UPP1 1060 aa14.82□□□□□ -0.04
DDX60-205ENST00000513997 GOLGA2Q08379 1002 aa14.81□□□□□ -0.04
DDX60-205ENST00000513997 NLRP6P59044 892 aa14.8□□□□□ -0.04
DDX60-205ENST00000513997 MKRN3Q13064 507 aaKnown RBP14.77□□□□□ -0.05
DDX60-205ENST00000513997 TRIM35Q9UPQ4 493 aa14.76□□□□□ -0.05
DDX60-205ENST00000513997 ATMINO43313 823 aaPredicted RBP14.74□□□□□ -0.05
DDX60-205ENST00000513997 ATN1P54259 1190 aaPredicted RBP14.74□□□□□ -0.05
DDX60-205ENST00000513997 ASTLQ6HA08 431 aaPredicted RBP14.74□□□□□ -0.05
DDX60-205ENST00000513997 PPP1R37O75864 691 aa14.73□□□□□ -0.05
DDX60-205ENST00000513997 MS4A4AQ96JQ5 239 aa14.72□□□□□ -0.05
DDX60-205ENST00000513997 ILDR1Q86SU0 546 aaPredicted RBP14.7□□□□□ -0.06
DDX60-205ENST00000513997 KCNV2Q8TDN2 545 aa14.69□□□□□ -0.06
DDX60-205ENST00000513997 ZMYND15Q9H091 742 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms