RNA–Protein interactions for RNA: ENST00000513636.1

ATP2C1-220, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 590 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-220ENST00000513636 POTEGQ6S5H5 508 aa13.2□□□□□ -0.3
ATP2C1-220ENST00000513636 PLCD3Q8N3E9 789 aa13.2□□□□□ -0.3
ATP2C1-220ENST00000513636 MS4A3Q96HJ5 214 aa13.13□□□□□ -0.31
ATP2C1-220ENST00000513636 FKBP8Q14318 412 aa13.12□□□□□ -0.31
ATP2C1-220ENST00000513636 ZBTB47Q9UFB7 747 aaPredicted RBP13.11□□□□□ -0.31
ATP2C1-220ENST00000513636 CCDC61Q9Y6R9 512 aa13.08□□□□□ -0.32
ATP2C1-220ENST00000513636 PELP1Q8IZL8 1130 aaKnown RBP13.06□□□□□ -0.32
ATP2C1-220ENST00000513636 METRNQ9UJH8 293 aa13.05□□□□□ -0.32
ATP2C1-220ENST00000513636 ASTLQ6HA08 431 aaPredicted RBP13.03□□□□□ -0.32
ATP2C1-220ENST00000513636 SLC39A7Q92504 469 aa13.03□□□□□ -0.32
ATP2C1-220ENST00000513636 KIF12Q96FN5 646 aa13.03□□□□□ -0.32
ATP2C1-220ENST00000513636 ATMINO43313 823 aaPredicted RBP13.02□□□□□ -0.33
ATP2C1-220ENST00000513636 PCDH10Q9P2E7 1040 aa13.02□□□□□ -0.33
ATP2C1-220ENST00000513636 C7P10643 843 aa13.01□□□□□ -0.33
ATP2C1-220ENST00000513636 RASEFQ8IZ41 740 aa13.01□□□□□ -0.33
ATP2C1-220ENST00000513636 MAP3K13O43283 966 aa12.97□□□□□ -0.33
ATP2C1-220ENST00000513636 MAMSTRQ6ZN01 415 aa12.97□□□□□ -0.33
ATP2C1-220ENST00000513636 FBXO3Q9UK99 471 aa12.94□□□□□ -0.34
ATP2C1-220ENST00000513636 ATN1P54259 1190 aaPredicted RBP12.93□□□□□ -0.34
ATP2C1-220ENST00000513636 FAM212AQ96EL1 285 aa12.92□□□□□ -0.34
ATP2C1-220ENST00000513636 FAM163AQ96GL9 167 aaPredicted RBP12.92□□□□□ -0.34
ATP2C1-220ENST00000513636 SCUBE2Q9NQ36 999 aa12.9□□□□□ -0.34
ATP2C1-220ENST00000513636 POTEJP0CG39 1038 aa12.89□□□□□ -0.35
ATP2C1-220ENST00000513636 TIE1P35590 1138 aa12.89□□□□□ -0.35
ATP2C1-220ENST00000513636 PCDHB13Q9Y5F0 798 aa12.89□□□□□ -0.35
ATP2C1-220ENST00000513636 BMP2KQ9NSY1 1161 aaPredicted RBP12.88□□□□□ -0.35
ATP2C1-220ENST00000513636 NUBP1P53384 320 aa12.87□□□□□ -0.35
ATP2C1-220ENST00000513636 SGIP1Q9BQI5 828 aa12.86□□□□□ -0.35
ATP2C1-220ENST00000513636 DCAF8Q5TAQ9 597 aa12.84□□□□□ -0.35
ATP2C1-220ENST00000513636 TRPC6Q9Y210 931 aa12.84□□□□□ -0.35
ATP2C1-220ENST00000513636 SEC24BO95487 1268 aa12.83□□□□□ -0.36
ATP2C1-220ENST00000513636 TTLL13PA6NNM8 815 aa12.8□□□□□ -0.36
ATP2C1-220ENST00000513636 LCE2DQ5TA82 110 aaPredicted RBP12.8□□□□□ -0.36
ATP2C1-220ENST00000513636 KLHL34Q8N239 644 aa12.8□□□□□ -0.36
ATP2C1-220ENST00000513636 TRIM35Q9UPQ4 493 aa12.76□□□□□ -0.37
ATP2C1-220ENST00000513636 IFNL1Q8IU54 200 aa12.74□□□□□ -0.37
ATP2C1-220ENST00000513636 TMEM106CQ9BVX2 250 aa12.72□□□□□ -0.37
ATP2C1-220ENST00000513636 IER5LQ5T953 404 aa12.71□□□□□ -0.37
ATP2C1-220ENST00000513636 PYGBP11216 843 aa12.7□□□□□ -0.38
ATP2C1-220ENST00000513636 VASPP50552 380 aaPredicted RBP12.68□□□□□ -0.38
ATP2C1-220ENST00000513636 POTEFA5A3E0 1075 aa12.67□□□□□ -0.38
ATP2C1-220ENST00000513636 GSE1Q14687 1217 aa12.66□□□□□ -0.38
ATP2C1-220ENST00000513636 COLQQ9Y215 455 aaPredicted RBP12.66□□□□□ -0.38
ATP2C1-220ENST00000513636 PLCG2P16885 1265 aa12.64□□□□□ -0.39
ATP2C1-220ENST00000513636 CDAN1Q8IWY9 1227 aa12.64□□□□□ -0.39
ATP2C1-220ENST00000513636 PCDHB8Q9UN66 801 aa12.59□□□□□ -0.39
ATP2C1-220ENST00000513636 GOLGA2Q08379 1002 aa12.55□□□□□ -0.4
ATP2C1-220ENST00000513636 ZNF467Q7Z7K2 595 aaPredicted RBP12.55□□□□□ -0.4
ATP2C1-220ENST00000513636 OCEL1Q9H607 264 aa12.53□□□□□ -0.4
ATP2C1-220ENST00000513636 SLAIN1Q8ND83 568 aa12.52□□□□□ -0.41
ATP2C1-220ENST00000513636 IRX5P78411 483 aaPredicted RBP12.49□□□□□ -0.41
ATP2C1-220ENST00000513636 SPOCK2Q92563 424 aa12.49□□□□□ -0.41
ATP2C1-220ENST00000513636 CIZ1Q9ULV3 898 aaPredicted RBP12.49□□□□□ -0.41
ATP2C1-220ENST00000513636 MKRN3Q13064 507 aaKnown RBP12.48□□□□□ -0.41
ATP2C1-220ENST00000513636 ST18O60284 1047 aa12.46□□□□□ -0.41
ATP2C1-220ENST00000513636 CHRM1P11229 460 aaPredicted RBP12.46□□□□□ -0.41
ATP2C1-220ENST00000513636 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.42□□□□□ -0.42
ATP2C1-220ENST00000513636 PSEN1P49768 467 aa12.41□□□□□ -0.42
ATP2C1-220ENST00000513636 IFNLR1Q8IU57 520 aaPredicted RBP12.4□□□□□ -0.42
ATP2C1-220ENST00000513636 L3MBTL3Q96JM7 780 aaPredicted RBP12.37□□□□□ -0.43
ATP2C1-220ENST00000513636 SNPHO15079 494 aa12.36□□□□□ -0.43
ATP2C1-220ENST00000513636 MMRN1Q13201 1228 aa12.36□□□□□ -0.43
ATP2C1-220ENST00000513636 PDAP1Q13442 181 aaKnown RBP12.36□□□□□ -0.43
ATP2C1-220ENST00000513636 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.36□□□□□ -0.43
ATP2C1-220ENST00000513636 C3orf67Q6ZVT6 689 aa12.35□□□□□ -0.43
ATP2C1-220ENST00000513636 SPNS2Q8IVW8 549 aa12.32□□□□□ -0.44
ATP2C1-220ENST00000513636 G3V3G9 751 aa12.31□□□□□ -0.44
ATP2C1-220ENST00000513636 TMEM121BQ9BXQ6 578 aaPredicted RBP12.28□□□□□ -0.44
ATP2C1-220ENST00000513636 PDCD7Q8N8D1 485 aaKnown RBP12.27□□□□□ -0.45
ATP2C1-220ENST00000513636 TRIM41Q8WV44 630 aa12.27□□□□□ -0.45
ATP2C1-220ENST00000513636 CABP2Q9NPB3 220 aa12.27□□□□□ -0.45
ATP2C1-220ENST00000513636 MARVELD3Q96A59 401 aa12.25□□□□□ -0.45
ATP2C1-220ENST00000513636 DPY19L2Q6NUT2 758 aa12.15□□□□□ -0.46
ATP2C1-220ENST00000513636 BOLA1Q9Y3E2 137 aa12.15□□□□□ -0.46
ATP2C1-220ENST00000513636 EMP3P54852 163 aa12.12□□□□□ -0.47
ATP2C1-220ENST00000513636 ILDR1Q86SU0 546 aaPredicted RBP12.11□□□□□ -0.47
ATP2C1-220ENST00000513636 EFCAB3Q8N7B9 438 aa12.09□□□□□ -0.47
ATP2C1-220ENST00000513636 RIOK3O14730 519 aaKnown RBP12.07□□□□□ -0.48
ATP2C1-220ENST00000513636 VGFO15240 615 aaPredicted RBP12.04□□□□□ -0.48
ATP2C1-220ENST00000513636 ZNF710Q8N1W2 664 aa12.04□□□□□ -0.48
ATP2C1-220ENST00000513636 TAOK2Q9UL54 1235 aa12.04□□□□□ -0.48
ATP2C1-220ENST00000513636 FAM205CA6NFA0 338 aa12.02□□□□□ -0.49
ATP2C1-220ENST00000513636 SOX12O15370 315 aa12.01□□□□□ -0.49
ATP2C1-220ENST00000513636 HS3ST6Q96QI5 342 aa12.01□□□□□ -0.49
ATP2C1-220ENST00000513636 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12□□□□□ -0.49
ATP2C1-220ENST00000513636 ZFP91Q96JP5 570 aaPredicted RBP12□□□□□ -0.49
ATP2C1-220ENST00000513636 DOK7Q18PE1 504 aa11.98□□□□□ -0.49
ATP2C1-220ENST00000513636 RIMBP2O15034 1052 aa11.97□□□□□ -0.49
ATP2C1-220ENST00000513636 KRTAP3-3Q9BYR6 98 aa11.97□□□□□ -0.49
ATP2C1-220ENST00000513636 KRTAP3-2Q9BYR7 98 aa11.97□□□□□ -0.49
ATP2C1-220ENST00000513636 RNF25Q96BH1 459 aaPredicted RBP11.94□□□□□ -0.5
ATP2C1-220ENST00000513636 POTEB3A0JP26 581 aa11.92□□□□□ -0.5
ATP2C1-220ENST00000513636 POTEBQ6S5H4 581 aa11.92□□□□□ -0.5
ATP2C1-220ENST00000513636 MICALL2Q8IY33 904 aa11.92□□□□□ -0.5
ATP2C1-220ENST00000513636 PHF8Q9UPP1 1060 aa11.91□□□□□ -0.5
ATP2C1-220ENST00000513636 HOXB3P14651 431 aaPredicted RBP11.9□□□□□ -0.5
ATP2C1-220ENST00000513636 NLRP6P59044 892 aa11.89□□□□□ -0.51
ATP2C1-220ENST00000513636 ERBB3P21860 1342 aa11.88□□□□□ -0.51
ATP2C1-220ENST00000513636 HOXB1P14653 301 aaPredicted RBP11.88□□□□□ -0.51
ATP2C1-220ENST00000513636 STK24Q9Y6E0 443 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms