RNA–Protein interactions for RNA: ENST00000513289.5

CDH9-205, Transcript of cadherin 9, humanhuman

TSL 3

Gene CDH9, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-205ENST00000513289 PRKAR2AP13861 404 aaKnown RBP11.06□□□□□ -0.64
CDH9-205ENST00000513289 ABCC9O60706 1549 aa11.05□□□□□ -0.64
CDH9-205ENST00000513289 POTEIP0CG38 1075 aa11.05□□□□□ -0.64
CDH9-205ENST00000513289 BBXQ8WY36 941 aaPredicted RBP11.04□□□□□ -0.64
CDH9-205ENST00000513289 ZBTB4Q9P1Z0 1013 aaPredicted RBP11□□□□□ -0.65
CDH9-205ENST00000513289 CIZ1Q9ULV3 898 aaPredicted RBP10.99□□□□□ -0.65
CDH9-205ENST00000513289 PAXIP1Q6ZW49 1069 aaPredicted RBP10.98□□□□□ -0.65
CDH9-205ENST00000513289 VSIG10Q8N0Z9 540 aa10.98□□□□□ -0.65
CDH9-205ENST00000513289 PLEKHG5O94827 1062 aa10.96□□□□□ -0.65
CDH9-205ENST00000513289 CFAP44Q96MT7 982 aa10.96□□□□□ -0.65
CDH9-205ENST00000513289 ZBTB47Q9UFB7 747 aaPredicted RBP10.96□□□□□ -0.65
CDH9-205ENST00000513289 KDM2AQ9Y2K7 1162 aa10.93□□□□□ -0.66
CDH9-205ENST00000513289 OTUD5Q96G74 571 aa10.92□□□□□ -0.66
CDH9-205ENST00000513289 PRR29P0C7W0 189 aa10.91□□□□□ -0.66
CDH9-205ENST00000513289 BCANQ96GW7 911 aa10.91□□□□□ -0.66
CDH9-205ENST00000513289 CHGAP10645 457 aaKnown RBP10.89□□□□□ -0.67
CDH9-205ENST00000513289 CHADLQ6NUI6 762 aa10.89□□□□□ -0.67
CDH9-205ENST00000513289 SPRYD3Q8NCJ5 442 aa10.86□□□□□ -0.67
CDH9-205ENST00000513289 RNF25Q96BH1 459 aaPredicted RBP10.86□□□□□ -0.67
CDH9-205ENST00000513289 CCDC180Q9P1Z9 1646 aa10.84□□□□□ -0.67
CDH9-205ENST00000513289 TRIM41Q8WV44 630 aa10.84□□□□□ -0.67
CDH9-205ENST00000513289 NUBP1P53384 320 aa10.83□□□□□ -0.68
CDH9-205ENST00000513289 TSHZ2Q9NRE2 1034 aa10.83□□□□□ -0.68
CDH9-205ENST00000513289 PRKCSHP14314 528 aaPredicted RBP10.8□□□□□ -0.68
CDH9-205ENST00000513289 HS6ST3Q8IZP7 471 aa10.8□□□□□ -0.68
CDH9-205ENST00000513289 GSE1Q14687 1217 aa10.79□□□□□ -0.68
CDH9-205ENST00000513289 TAOK2Q9UL54 1235 aa10.78□□□□□ -0.68
CDH9-205ENST00000513289 CREBZFQ9NS37 354 aa10.77□□□□□ -0.69
CDH9-205ENST00000513289 MNX1P50219 401 aaPredicted RBP10.75□□□□□ -0.69
CDH9-205ENST00000513289 FARP1Q9Y4F1 1045 aaPredicted RBP10.74□□□□□ -0.69
CDH9-205ENST00000513289 DCAF8Q5TAQ9 597 aa10.72□□□□□ -0.69
CDH9-205ENST00000513289 RIOK3O14730 519 aaKnown RBP10.71□□□□□ -0.69
CDH9-205ENST00000513289 CD44P16070 742 aaKnown RBP10.71□□□□□ -0.69
CDH9-205ENST00000513289 NKX1-1Q15270 411 aaPredicted RBP10.71□□□□□ -0.69
CDH9-205ENST00000513289 DNAJC5Q9H3Z4 198 aa10.71□□□□□ -0.69
CDH9-205ENST00000513289 FAM212AQ96EL1 285 aa10.7□□□□□ -0.7
CDH9-205ENST00000513289 DCBLD2Q96PD2 775 aa10.7□□□□□ -0.7
CDH9-205ENST00000513289 CLCN6P51797 869 aa10.69□□□□□ -0.7
CDH9-205ENST00000513289 RASEFQ8IZ41 740 aa10.68□□□□□ -0.7
CDH9-205ENST00000513289 POTEB2H3BUK9 544 aa10.65□□□□□ -0.7
CDH9-205ENST00000513289 TPRNQ4KMQ1 711 aa10.64□□□□□ -0.71
CDH9-205ENST00000513289 STK25O00506 426 aa10.62□□□□□ -0.71
CDH9-205ENST00000513289 VGFO15240 615 aaPredicted RBP10.61□□□□□ -0.71
CDH9-205ENST00000513289 GTPBP6O43824 516 aaPredicted RBP10.61□□□□□ -0.71
CDH9-205ENST00000513289 CHRM1P11229 460 aaPredicted RBP10.59□□□□□ -0.71
CDH9-205ENST00000513289 LCE2DQ5TA82 110 aaPredicted RBP10.59□□□□□ -0.71
CDH9-205ENST00000513289 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.57□□□□□ -0.72
CDH9-205ENST00000513289 PYGBP11216 843 aa10.57□□□□□ -0.72
CDH9-205ENST00000513289 ZFP91Q96JP5 570 aaPredicted RBP10.57□□□□□ -0.72
CDH9-205ENST00000513289 ZNF579Q8NAF0 562 aaKnown RBP10.56□□□□□ -0.72
CDH9-205ENST00000513289 BCL11BQ9C0K0 894 aaPredicted RBP10.55□□□□□ -0.72
CDH9-205ENST00000513289 SGIP1Q9BQI5 828 aa10.54□□□□□ -0.72
CDH9-205ENST00000513289 STK24Q9Y6E0 443 aa10.54□□□□□ -0.72
CDH9-205ENST00000513289 ZRANB1Q9UGI0 708 aa10.53□□□□□ -0.72
CDH9-205ENST00000513289 NBR1Q14596 966 aa10.51□□□□□ -0.73
CDH9-205ENST00000513289 PAK3O75914 559 aaPredicted RBP10.45□□□□□ -0.74
CDH9-205ENST00000513289 FAM163AQ96GL9 167 aaPredicted RBP10.44□□□□□ -0.74
CDH9-205ENST00000513289 TSPYL2Q9H2G4 693 aaPredicted RBP10.44□□□□□ -0.74
CDH9-205ENST00000513289 RB1CC1Q8TDY2 1594 aa10.43□□□□□ -0.74
CDH9-205ENST00000513289 CDAN1Q8IWY9 1227 aa10.42□□□□□ -0.74
CDH9-205ENST00000513289 GALR2O43603 387 aaPredicted RBP10.41□□□□□ -0.74
CDH9-205ENST00000513289 RYDENQ9NUL5 291 aaKnown RBP10.4□□□□□ -0.74
CDH9-205ENST00000513289 ZNF467Q7Z7K2 595 aaPredicted RBP10.38□□□□□ -0.75
CDH9-205ENST00000513289 PHF12Q96QT6 1004 aa10.36□□□□□ -0.75
CDH9-205ENST00000513289 PCDHB8Q9UN66 801 aa10.36□□□□□ -0.75
CDH9-205ENST00000513289 PCDHB13Q9Y5F0 798 aa10.36□□□□□ -0.75
CDH9-205ENST00000513289 PDAP1Q13442 181 aaKnown RBP10.35□□□□□ -0.75
CDH9-205ENST00000513289 CCDC61Q9Y6R9 512 aa10.35□□□□□ -0.75
CDH9-205ENST00000513289 NACADO15069 1562 aa10.35□□□□□ -0.75
CDH9-205ENST00000513289 MMRN1Q13201 1228 aa10.34□□□□□ -0.75
CDH9-205ENST00000513289 CADPS2Q86UW7 1296 aa10.34□□□□□ -0.75
CDH9-205ENST00000513289 MAMSTRQ6ZN01 415 aa10.3□□□□□ -0.76
CDH9-205ENST00000513289 PSEN1P49768 467 aa10.29□□□□□ -0.76
CDH9-205ENST00000513289 MFRPQ9BY79 579 aa10.29□□□□□ -0.76
CDH9-205ENST00000513289 POTEJP0CG39 1038 aa10.26□□□□□ -0.77
CDH9-205ENST00000513289 KCNV2Q8TDN2 545 aa10.26□□□□□ -0.77
CDH9-205ENST00000513289 P3H3Q8IVL6 736 aa10.25□□□□□ -0.77
CDH9-205ENST00000513289 IFNL1Q8IU54 200 aa10.24□□□□□ -0.77
CDH9-205ENST00000513289 MS4A3Q96HJ5 214 aa10.23□□□□□ -0.77
CDH9-205ENST00000513289 ASTLQ6HA08 431 aaPredicted RBP10.21□□□□□ -0.77
CDH9-205ENST00000513289 SPNS2Q8IVW8 549 aa10.21□□□□□ -0.77
CDH9-205ENST00000513289 MAP3K13O43283 966 aa10.2□□□□□ -0.78
CDH9-205ENST00000513289 PPP1R37O75864 691 aa10.2□□□□□ -0.78
CDH9-205ENST00000513289 PELP1Q8IZL8 1130 aaKnown RBP10.2□□□□□ -0.78
CDH9-205ENST00000513289 EFCAB3Q8N7B9 438 aa10.19□□□□□ -0.78
CDH9-205ENST00000513289 FBXO22Q8NEZ5 403 aa10.19□□□□□ -0.78
CDH9-205ENST00000513289 KIF12Q96FN5 646 aa10.19□□□□□ -0.78
CDH9-205ENST00000513289 CABP2Q9NPB3 220 aa10.18□□□□□ -0.78
CDH9-205ENST00000513289 WDR70Q9NW82 654 aa10.18□□□□□ -0.78
CDH9-205ENST00000513289 ATMINO43313 823 aaPredicted RBP10.17□□□□□ -0.78
CDH9-205ENST00000513289 PHF8Q9UPP1 1060 aa10.16□□□□□ -0.78
CDH9-205ENST00000513289 MYO15BQ96JP2 1530 aa10.16□□□□□ -0.78
CDH9-205ENST00000513289 SLC39A7Q92504 469 aa10.15□□□□□ -0.78
CDH9-205ENST00000513289 METRNQ9UJH8 293 aa10.15□□□□□ -0.78
CDH9-205ENST00000513289 SCUBE2Q9NQ36 999 aa10.14□□□□□ -0.79
CDH9-205ENST00000513289 C7P10643 843 aa10.13□□□□□ -0.79
CDH9-205ENST00000513289 NLRP6P59044 892 aa10.12□□□□□ -0.79
CDH9-205ENST00000513289 LMOD2Q6P5Q4 547 aa10.11□□□□□ -0.79
CDH9-205ENST00000513289 SOX12O15370 315 aa10.1□□□□□ -0.79
CDH9-205ENST00000513289 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms