RNA–Protein interactions for RNA: ENST00000513153.5

LINC01088-210, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 695 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-210ENST00000513153 POTEMA6NI47 508 aa14.75□□□□□ -0.05
LINC01088-210ENST00000513153 SLC39A7Q92504 469 aa14.75□□□□□ -0.05
LINC01088-210ENST00000513153 TSPYL2Q9H2G4 693 aaPredicted RBP14.75□□□□□ -0.05
LINC01088-210ENST00000513153 C7P10643 843 aa14.73□□□□□ -0.05
LINC01088-210ENST00000513153 POTEGQ6S5H5 508 aa14.71□□□□□ -0.05
LINC01088-210ENST00000513153 POTEJP0CG39 1038 aa14.66□□□□□ -0.06
LINC01088-210ENST00000513153 PROM2Q8N271 834 aa14.66□□□□□ -0.06
LINC01088-210ENST00000513153 CCDC61Q9Y6R9 512 aa14.65□□□□□ -0.06
LINC01088-210ENST00000513153 MAMSTRQ6ZN01 415 aa14.64□□□□□ -0.07
LINC01088-210ENST00000513153 ATN1P54259 1190 aaPredicted RBP14.62□□□□□ -0.07
LINC01088-210ENST00000513153 KIF12Q96FN5 646 aa14.6□□□□□ -0.07
LINC01088-210ENST00000513153 SCUBE2Q9NQ36 999 aa14.55□□□□□ -0.08
LINC01088-210ENST00000513153 PLEKHG5O94827 1062 aa14.54□□□□□ -0.08
LINC01088-210ENST00000513153 BMP2KQ9NSY1 1161 aaPredicted RBP14.53□□□□□ -0.08
LINC01088-210ENST00000513153 MIER1Q8N108 512 aa14.52□□□□□ -0.09
LINC01088-210ENST00000513153 PCDH10Q9P2E7 1040 aa14.52□□□□□ -0.09
LINC01088-210ENST00000513153 TRPC6Q9Y210 931 aa14.52□□□□□ -0.09
LINC01088-210ENST00000513153 MAP3K13O43283 966 aa14.51□□□□□ -0.09
LINC01088-210ENST00000513153 FAM163AQ96GL9 167 aaPredicted RBP14.5□□□□□ -0.09
LINC01088-210ENST00000513153 POTEFA5A3E0 1075 aa14.48□□□□□ -0.09
LINC01088-210ENST00000513153 RASEFQ8IZ41 740 aa14.48□□□□□ -0.09
LINC01088-210ENST00000513153 TIE1P35590 1138 aa14.47□□□□□ -0.09
LINC01088-210ENST00000513153 LCE2DQ5TA82 110 aaPredicted RBP14.45□□□□□ -0.1
LINC01088-210ENST00000513153 TTLL13PA6NNM8 815 aa14.39□□□□□ -0.11
LINC01088-210ENST00000513153 SEC24BO95487 1268 aa14.38□□□□□ -0.11
LINC01088-210ENST00000513153 PLCD3Q8N3E9 789 aa14.37□□□□□ -0.11
LINC01088-210ENST00000513153 COLQQ9Y215 455 aaPredicted RBP14.36□□□□□ -0.11
LINC01088-210ENST00000513153 PCDHB13Q9Y5F0 798 aa14.32□□□□□ -0.12
LINC01088-210ENST00000513153 TRIM35Q9UPQ4 493 aa14.31□□□□□ -0.12
LINC01088-210ENST00000513153 SGIP1Q9BQI5 828 aa14.3□□□□□ -0.12
LINC01088-210ENST00000513153 IER5LQ5T953 404 aa14.27□□□□□ -0.13
LINC01088-210ENST00000513153 ZBTB47Q9UFB7 747 aaPredicted RBP14.25□□□□□ -0.13
LINC01088-210ENST00000513153 NUBP1P53384 320 aa14.23□□□□□ -0.13
LINC01088-210ENST00000513153 IFNL1Q8IU54 200 aa14.21□□□□□ -0.13
LINC01088-210ENST00000513153 TMEM106CQ9BVX2 250 aa14.18□□□□□ -0.14
LINC01088-210ENST00000513153 SLAIN1Q8ND83 568 aa14.17□□□□□ -0.14
LINC01088-210ENST00000513153 FAM212AQ96EL1 285 aa14.17□□□□□ -0.14
LINC01088-210ENST00000513153 CDAN1Q8IWY9 1227 aa14.16□□□□□ -0.14
LINC01088-210ENST00000513153 PLCG2P16885 1265 aa14.14□□□□□ -0.15
LINC01088-210ENST00000513153 ST18O60284 1047 aa14.09□□□□□ -0.15
LINC01088-210ENST00000513153 IRX5P78411 483 aaPredicted RBP14.05□□□□□ -0.16
LINC01088-210ENST00000513153 DCAF8Q5TAQ9 597 aa14.03□□□□□ -0.16
LINC01088-210ENST00000513153 PYGBP11216 843 aa14□□□□□ -0.17
LINC01088-210ENST00000513153 FKBP8Q14318 412 aa14□□□□□ -0.17
LINC01088-210ENST00000513153 OCEL1Q9H607 264 aa13.99□□□□□ -0.17
LINC01088-210ENST00000513153 PCDHB8Q9UN66 801 aa13.94□□□□□ -0.18
LINC01088-210ENST00000513153 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.93□□□□□ -0.18
LINC01088-210ENST00000513153 SNPHO15079 494 aa13.9□□□□□ -0.18
LINC01088-210ENST00000513153 TMEM121BQ9BXQ6 578 aaPredicted RBP13.9□□□□□ -0.18
LINC01088-210ENST00000513153 MARVELD3Q96A59 401 aa13.83□□□□□ -0.2
LINC01088-210ENST00000513153 FBXO3Q9UK99 471 aa13.83□□□□□ -0.2
LINC01088-210ENST00000513153 MMRN1Q13201 1228 aa13.81□□□□□ -0.2
LINC01088-210ENST00000513153 SPNS2Q8IVW8 549 aa13.81□□□□□ -0.2
LINC01088-210ENST00000513153 GOLGA2Q08379 1002 aa13.78□□□□□ -0.2
LINC01088-210ENST00000513153 ZNF467Q7Z7K2 595 aaPredicted RBP13.78□□□□□ -0.2
LINC01088-210ENST00000513153 PDCD7Q8N8D1 485 aaKnown RBP13.78□□□□□ -0.2
LINC01088-210ENST00000513153 MKRN3Q13064 507 aaKnown RBP13.77□□□□□ -0.21
LINC01088-210ENST00000513153 GSE1Q14687 1217 aa13.77□□□□□ -0.21
LINC01088-210ENST00000513153 C3orf67Q6ZVT6 689 aa13.77□□□□□ -0.21
LINC01088-210ENST00000513153 KLHL34Q8N239 644 aa13.77□□□□□ -0.21
LINC01088-210ENST00000513153 L3MBTL3Q96JM7 780 aaPredicted RBP13.75□□□□□ -0.21
LINC01088-210ENST00000513153 EMP3P54852 163 aa13.7□□□□□ -0.22
LINC01088-210ENST00000513153 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.7□□□□□ -0.22
LINC01088-210ENST00000513153 PSEN1P49768 467 aa13.67□□□□□ -0.22
LINC01088-210ENST00000513153 VASPP50552 380 aaPredicted RBP13.67□□□□□ -0.22
LINC01088-210ENST00000513153 CHRM1P11229 460 aaPredicted RBP13.66□□□□□ -0.22
LINC01088-210ENST00000513153 FAM205CA6NFA0 338 aa13.61□□□□□ -0.23
LINC01088-210ENST00000513153 HS3ST6Q96QI5 342 aa13.61□□□□□ -0.23
LINC01088-210ENST00000513153 POTEB3A0JP26 581 aa13.58□□□□□ -0.24
LINC01088-210ENST00000513153 POTEBQ6S5H4 581 aa13.58□□□□□ -0.24
LINC01088-210ENST00000513153 PDAP1Q13442 181 aaKnown RBP13.57□□□□□ -0.24
LINC01088-210ENST00000513153 DPY19L2Q6NUT2 758 aa13.56□□□□□ -0.24
LINC01088-210ENST00000513153 KRTAP3-3Q9BYR6 98 aa13.56□□□□□ -0.24
LINC01088-210ENST00000513153 KRTAP3-2Q9BYR7 98 aa13.56□□□□□ -0.24
LINC01088-210ENST00000513153 ILDR1Q86SU0 546 aaPredicted RBP13.54□□□□□ -0.24
LINC01088-210ENST00000513153 G3V3G9 751 aa13.53□□□□□ -0.24
LINC01088-210ENST00000513153 CABP2Q9NPB3 220 aa13.53□□□□□ -0.24
LINC01088-210ENST00000513153 BOLA1Q9Y3E2 137 aa13.5□□□□□ -0.25
LINC01088-210ENST00000513153 CIZ1Q9ULV3 898 aaPredicted RBP13.48□□□□□ -0.25
LINC01088-210ENST00000513153 HOXB3P14651 431 aaPredicted RBP13.45□□□□□ -0.26
LINC01088-210ENST00000513153 SPOCK2Q92563 424 aa13.44□□□□□ -0.26
LINC01088-210ENST00000513153 ZNF710Q8N1W2 664 aa13.43□□□□□ -0.26
LINC01088-210ENST00000513153 HOXB1P14653 301 aaPredicted RBP13.4□□□□□ -0.26
LINC01088-210ENST00000513153 IFNLR1Q8IU57 520 aaPredicted RBP13.38□□□□□ -0.27
LINC01088-210ENST00000513153 DOK7Q18PE1 504 aa13.37□□□□□ -0.27
LINC01088-210ENST00000513153 ERBB3P21860 1342 aa13.37□□□□□ -0.27
LINC01088-210ENST00000513153 EFCAB3Q8N7B9 438 aa13.32□□□□□ -0.28
LINC01088-210ENST00000513153 RIMBP2O15034 1052 aa13.3□□□□□ -0.28
LINC01088-210ENST00000513153 VARS2Q5ST30 1063 aaKnown RBP13.27□□□□□ -0.29
LINC01088-210ENST00000513153 RNF166Q96A37 237 aaPredicted RBP13.25□□□□□ -0.29
LINC01088-210ENST00000513153 MICALL2Q8IY33 904 aa13.22□□□□□ -0.29
LINC01088-210ENST00000513153 TRIM41Q8WV44 630 aa13.22□□□□□ -0.29
LINC01088-210ENST00000513153 TMEM92Q6UXU6 159 aa13.2□□□□□ -0.3
LINC01088-210ENST00000513153 ZSWIM6Q9HCJ5 1215 aa13.18□□□□□ -0.3
LINC01088-210ENST00000513153 MYT1LQ9UL68 1186 aa13.18□□□□□ -0.3
LINC01088-210ENST00000513153 ZNF687Q8N1G0 1237 aa13.16□□□□□ -0.3
LINC01088-210ENST00000513153 SOX12O15370 315 aa13.15□□□□□ -0.3
LINC01088-210ENST00000513153 GPR153Q6NV75 609 aa13.14□□□□□ -0.31
LINC01088-210ENST00000513153 MS4A4AQ96JQ5 239 aa13.11□□□□□ -0.31
LINC01088-210ENST00000513153 PHF8Q9UPP1 1060 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms