RNA–Protein interactions for RNA: ENST00000513108.1

PROM1-214, Transcript of prominin 1, humanhuman

TSL 5

Gene PROM1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-214ENST00000513108 ZNF579Q8NAF0 562 aaKnown RBP11.4□□□□□ -0.58
PROM1-214ENST00000513108 CLCN6P51797 869 aa11.39□□□□□ -0.59
PROM1-214ENST00000513108 GABBR2O75899 941 aa11.36□□□□□ -0.59
PROM1-214ENST00000513108 PHF12Q96QT6 1004 aa11.36□□□□□ -0.59
PROM1-214ENST00000513108 GSE1Q14687 1217 aa11.34□□□□□ -0.59
PROM1-214ENST00000513108 CCDC61Q9Y6R9 512 aa11.33□□□□□ -0.6
PROM1-214ENST00000513108 CIZ1Q9ULV3 898 aaPredicted RBP11.31□□□□□ -0.6
PROM1-214ENST00000513108 KIF12Q96FN5 646 aa11.25□□□□□ -0.61
PROM1-214ENST00000513108 MAP3K13O43283 966 aa11.23□□□□□ -0.61
PROM1-214ENST00000513108 GALR2O43603 387 aaPredicted RBP11.23□□□□□ -0.61
PROM1-214ENST00000513108 PYGBP11216 843 aa11.23□□□□□ -0.61
PROM1-214ENST00000513108 DCBLD2Q96PD2 775 aa11.23□□□□□ -0.61
PROM1-214ENST00000513108 MS4A3Q96HJ5 214 aa11.21□□□□□ -0.61
PROM1-214ENST00000513108 PCDHB13Q9Y5F0 798 aa11.21□□□□□ -0.61
PROM1-214ENST00000513108 SGIP1Q9BQI5 828 aa11.18□□□□□ -0.62
PROM1-214ENST00000513108 TRIM41Q8WV44 630 aa11.15□□□□□ -0.62
PROM1-214ENST00000513108 CHRM1P11229 460 aaPredicted RBP11.14□□□□□ -0.63
PROM1-214ENST00000513108 IFNL1Q8IU54 200 aa11.12□□□□□ -0.63
PROM1-214ENST00000513108 ZNF467Q7Z7K2 595 aaPredicted RBP11.09□□□□□ -0.63
PROM1-214ENST00000513108 PCDHB8Q9UN66 801 aa11.09□□□□□ -0.63
PROM1-214ENST00000513108 POTEIP0CG38 1075 aa11.06□□□□□ -0.64
PROM1-214ENST00000513108 TIE1P35590 1138 aa11.06□□□□□ -0.64
PROM1-214ENST00000513108 TRPC6Q9Y210 931 aa11.05□□□□□ -0.64
PROM1-214ENST00000513108 ECM2O94769 699 aaPredicted RBP11.04□□□□□ -0.64
PROM1-214ENST00000513108 ASTLQ6HA08 431 aaPredicted RBP11.03□□□□□ -0.64
PROM1-214ENST00000513108 ATMINO43313 823 aaPredicted RBP11.02□□□□□ -0.65
PROM1-214ENST00000513108 BMP2KQ9NSY1 1161 aaPredicted RBP11.02□□□□□ -0.65
PROM1-214ENST00000513108 TMEM106CQ9BVX2 250 aa11.01□□□□□ -0.65
PROM1-214ENST00000513108 TTLL13PA6NNM8 815 aa10.99□□□□□ -0.65
PROM1-214ENST00000513108 ATN1P54259 1190 aaPredicted RBP10.99□□□□□ -0.65
PROM1-214ENST00000513108 PKD2Q13563 968 aa10.98□□□□□ -0.65
PROM1-214ENST00000513108 PSEN1P49768 467 aa10.97□□□□□ -0.65
PROM1-214ENST00000513108 PDAP1Q13442 181 aaKnown RBP10.97□□□□□ -0.65
PROM1-214ENST00000513108 RIOK3O14730 519 aaKnown RBP10.96□□□□□ -0.65
PROM1-214ENST00000513108 PELP1Q8IZL8 1130 aaKnown RBP10.95□□□□□ -0.66
PROM1-214ENST00000513108 SLC39A7Q92504 469 aa10.95□□□□□ -0.66
PROM1-214ENST00000513108 TAOK2Q9UL54 1235 aa10.95□□□□□ -0.66
PROM1-214ENST00000513108 GOLGA2Q08379 1002 aa10.94□□□□□ -0.66
PROM1-214ENST00000513108 TRIM35Q9UPQ4 493 aa10.94□□□□□ -0.66
PROM1-214ENST00000513108 C7P10643 843 aa10.93□□□□□ -0.66
PROM1-214ENST00000513108 METRNQ9UJH8 293 aa10.91□□□□□ -0.66
PROM1-214ENST00000513108 VGFO15240 615 aaPredicted RBP10.9□□□□□ -0.66
PROM1-214ENST00000513108 SEC24BO95487 1268 aa10.89□□□□□ -0.67
PROM1-214ENST00000513108 RNF25Q96BH1 459 aaPredicted RBP10.89□□□□□ -0.67
PROM1-214ENST00000513108 RGL2O15211 777 aa10.87□□□□□ -0.67
PROM1-214ENST00000513108 MKRN3Q13064 507 aaKnown RBP10.87□□□□□ -0.67
PROM1-214ENST00000513108 IER5LQ5T953 404 aa10.86□□□□□ -0.67
PROM1-214ENST00000513108 CABP2Q9NPB3 220 aa10.85□□□□□ -0.67
PROM1-214ENST00000513108 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.84□□□□□ -0.67
PROM1-214ENST00000513108 ZFP91Q96JP5 570 aaPredicted RBP10.84□□□□□ -0.67
PROM1-214ENST00000513108 LHX8Q68G74 356 aa10.83□□□□□ -0.68
PROM1-214ENST00000513108 AMER1Q5JTC6 1135 aaPredicted RBP10.82□□□□□ -0.68
PROM1-214ENST00000513108 PLCG2P16885 1265 aa10.81□□□□□ -0.68
PROM1-214ENST00000513108 STK25O00506 426 aa10.79□□□□□ -0.68
PROM1-214ENST00000513108 STK24Q9Y6E0 443 aa10.79□□□□□ -0.68
PROM1-214ENST00000513108 DCAF8L2P0C7V8 631 aa10.78□□□□□ -0.68
PROM1-214ENST00000513108 BCL11BQ9C0K0 894 aaPredicted RBP10.78□□□□□ -0.68
PROM1-214ENST00000513108 OCEL1Q9H607 264 aa10.77□□□□□ -0.69
PROM1-214ENST00000513108 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.77□□□□□ -0.69
PROM1-214ENST00000513108 COLQQ9Y215 455 aaPredicted RBP10.77□□□□□ -0.69
PROM1-214ENST00000513108 IRX5P78411 483 aaPredicted RBP10.75□□□□□ -0.69
PROM1-214ENST00000513108 EFCAB3Q8N7B9 438 aa10.75□□□□□ -0.69
PROM1-214ENST00000513108 POTEFA5A3E0 1075 aa10.73□□□□□ -0.69
PROM1-214ENST00000513108 POTEB2H3BUK9 544 aa10.71□□□□□ -0.69
PROM1-214ENST00000513108 RTN4Q9NQC3 1192 aaKnown RBP10.71□□□□□ -0.69
PROM1-214ENST00000513108 SOX12O15370 315 aa10.7□□□□□ -0.7
PROM1-214ENST00000513108 CHGAP10645 457 aaKnown RBP10.7□□□□□ -0.7
PROM1-214ENST00000513108 MAMSTRQ6ZN01 415 aa10.7□□□□□ -0.7
PROM1-214ENST00000513108 G3V3G9 751 aa10.67□□□□□ -0.7
PROM1-214ENST00000513108 SCUBE2Q9NQ36 999 aa10.67□□□□□ -0.7
PROM1-214ENST00000513108 L3MBTL3Q96JM7 780 aaPredicted RBP10.66□□□□□ -0.7
PROM1-214ENST00000513108 HS6ST3Q8IZP7 471 aa10.65□□□□□ -0.7
PROM1-214ENST00000513108 PDCD7Q8N8D1 485 aaKnown RBP10.64□□□□□ -0.71
PROM1-214ENST00000513108 NLRP6P59044 892 aa10.63□□□□□ -0.71
PROM1-214ENST00000513108 PHF8Q9UPP1 1060 aa10.63□□□□□ -0.71
PROM1-214ENST00000513108 POTEJP0CG39 1038 aa10.61□□□□□ -0.71
PROM1-214ENST00000513108 ILDR1Q86SU0 546 aaPredicted RBP10.61□□□□□ -0.71
PROM1-214ENST00000513108 OTUD5Q96G74 571 aa10.61□□□□□ -0.71
PROM1-214ENST00000513108 DPY19L2Q6NUT2 758 aa10.6□□□□□ -0.71
PROM1-214ENST00000513108 C3orf67Q6ZVT6 689 aa10.57□□□□□ -0.72
PROM1-214ENST00000513108 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.57□□□□□ -0.72
PROM1-214ENST00000513108 BOLA1Q9Y3E2 137 aa10.57□□□□□ -0.72
PROM1-214ENST00000513108 MFRPQ9BY79 579 aa10.56□□□□□ -0.72
PROM1-214ENST00000513108 FBXO22Q8NEZ5 403 aa10.53□□□□□ -0.72
PROM1-214ENST00000513108 MS4A4AQ96JQ5 239 aa10.53□□□□□ -0.72
PROM1-214ENST00000513108 SLAIN1Q8ND83 568 aa10.52□□□□□ -0.73
PROM1-214ENST00000513108 RYDENQ9NUL5 291 aaKnown RBP10.51□□□□□ -0.73
PROM1-214ENST00000513108 DNAJC5Q9H3Z4 198 aa10.49□□□□□ -0.73
PROM1-214ENST00000513108 MICALL2Q8IY33 904 aa10.47□□□□□ -0.73
PROM1-214ENST00000513108 NKX1-1Q15270 411 aaPredicted RBP10.46□□□□□ -0.73
PROM1-214ENST00000513108 TMEM121BQ9BXQ6 578 aaPredicted RBP10.45□□□□□ -0.74
PROM1-214ENST00000513108 BBXQ8WY36 941 aaPredicted RBP10.43□□□□□ -0.74
PROM1-214ENST00000513108 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.42□□□□□ -0.74
PROM1-214ENST00000513108 PPP1R37O75864 691 aa10.41□□□□□ -0.74
PROM1-214ENST00000513108 SNPHO15079 494 aa10.39□□□□□ -0.75
PROM1-214ENST00000513108 GTPBP6O43824 516 aaPredicted RBP10.37□□□□□ -0.75
PROM1-214ENST00000513108 FAM163AQ96GL9 167 aaPredicted RBP10.37□□□□□ -0.75
PROM1-214ENST00000513108 SPRYD3Q8NCJ5 442 aa10.33□□□□□ -0.76
PROM1-214ENST00000513108 TMC2Q8TDI7 906 aa10.33□□□□□ -0.76
PROM1-214ENST00000513108 TMEM92Q6UXU6 159 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms