RNA–Protein interactions for RNA: ENST00000512331.5

RUFY3-210, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 3

Gene RUFY3, Length 866 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-210ENST00000512331 NUBP1P53384 320 aa12.97□□□□□ -0.33
RUFY3-210ENST00000512331 CACNB1Q02641 598 aaPredicted RBP12.97□□□□□ -0.33
RUFY3-210ENST00000512331 DCAF8Q5TAQ9 597 aa12.95□□□□□ -0.34
RUFY3-210ENST00000512331 RIOK3O14730 519 aaKnown RBP12.94□□□□□ -0.34
RUFY3-210ENST00000512331 SPDYE1Q8NFV5 336 aaPredicted RBP12.94□□□□□ -0.34
RUFY3-210ENST00000512331 NBR1Q14596 966 aa12.93□□□□□ -0.34
RUFY3-210ENST00000512331 FAM212AQ96EL1 285 aa12.9□□□□□ -0.34
RUFY3-210ENST00000512331 NKX1-1Q15270 411 aaPredicted RBP12.87□□□□□ -0.35
RUFY3-210ENST00000512331 STK25O00506 426 aa12.85□□□□□ -0.35
RUFY3-210ENST00000512331 AKT1S1Q96B36 256 aa12.85□□□□□ -0.35
RUFY3-210ENST00000512331 RBM42Q9BTD8 480 aaKnown RBP12.85□□□□□ -0.35
RUFY3-210ENST00000512331 CLEC11AQ9Y240 323 aa12.85□□□□□ -0.35
RUFY3-210ENST00000512331 VGFO15240 615 aaPredicted RBP12.84□□□□□ -0.35
RUFY3-210ENST00000512331 CREBZFQ9NS37 354 aa12.84□□□□□ -0.35
RUFY3-210ENST00000512331 PRR29P0C7W0 189 aa12.83□□□□□ -0.36
RUFY3-210ENST00000512331 GTPBP6O43824 516 aaPredicted RBP12.82□□□□□ -0.36
RUFY3-210ENST00000512331 CHRM1P11229 460 aaPredicted RBP12.79□□□□□ -0.36
RUFY3-210ENST00000512331 MNX1P50219 401 aaPredicted RBP12.79□□□□□ -0.36
RUFY3-210ENST00000512331 RASEFQ8IZ41 740 aa12.75□□□□□ -0.37
RUFY3-210ENST00000512331 SGIP1Q9BQI5 828 aa12.74□□□□□ -0.37
RUFY3-210ENST00000512331 RYDENQ9NUL5 291 aaKnown RBP12.73□□□□□ -0.37
RUFY3-210ENST00000512331 STK24Q9Y6E0 443 aa12.73□□□□□ -0.37
RUFY3-210ENST00000512331 REM2Q8IYK8 340 aaPredicted RBP12.72□□□□□ -0.37
RUFY3-210ENST00000512331 BCL11BQ9C0K0 894 aaPredicted RBP12.72□□□□□ -0.37
RUFY3-210ENST00000512331 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.71□□□□□ -0.37
RUFY3-210ENST00000512331 ZFP91Q96JP5 570 aaPredicted RBP12.71□□□□□ -0.37
RUFY3-210ENST00000512331 CCDC180Q9P1Z9 1646 aa12.7□□□□□ -0.38
RUFY3-210ENST00000512331 PYGBP11216 843 aa12.67□□□□□ -0.38
RUFY3-210ENST00000512331 PITPNM1O00562 1244 aa12.58□□□□□ -0.4
RUFY3-210ENST00000512331 P3H3Q8IVL6 736 aa12.56□□□□□ -0.4
RUFY3-210ENST00000512331 ZNF467Q7Z7K2 595 aaPredicted RBP12.53□□□□□ -0.4
RUFY3-210ENST00000512331 TSPYL2Q9H2G4 693 aaPredicted RBP12.49□□□□□ -0.41
RUFY3-210ENST00000512331 PDAP1Q13442 181 aaKnown RBP12.47□□□□□ -0.41
RUFY3-210ENST00000512331 WDR70Q9NW82 654 aa12.47□□□□□ -0.41
RUFY3-210ENST00000512331 CHADLQ6NUI6 762 aa12.44□□□□□ -0.42
RUFY3-210ENST00000512331 CADPS2Q86UW7 1296 aa12.42□□□□□ -0.42
RUFY3-210ENST00000512331 KCNV2Q8TDN2 545 aa12.41□□□□□ -0.42
RUFY3-210ENST00000512331 PCDHB8Q9UN66 801 aa12.4□□□□□ -0.42
RUFY3-210ENST00000512331 PCDHB13Q9Y5F0 798 aa12.4□□□□□ -0.42
RUFY3-210ENST00000512331 FARP1Q9Y4F1 1045 aaPredicted RBP12.39□□□□□ -0.43
RUFY3-210ENST00000512331 PSEN1P49768 467 aa12.37□□□□□ -0.43
RUFY3-210ENST00000512331 ZNF579Q8NAF0 562 aaKnown RBP12.36□□□□□ -0.43
RUFY3-210ENST00000512331 MFRPQ9BY79 579 aa12.35□□□□□ -0.43
RUFY3-210ENST00000512331 CCDC61Q9Y6R9 512 aa12.34□□□□□ -0.43
RUFY3-210ENST00000512331 LMOD2Q6P5Q4 547 aa12.33□□□□□ -0.44
RUFY3-210ENST00000512331 GTF3C3Q9Y5Q9 886 aa12.32□□□□□ -0.44
RUFY3-210ENST00000512331 TULP1O00294 542 aaPredicted RBP12.3□□□□□ -0.44
RUFY3-210ENST00000512331 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.3□□□□□ -0.44
RUFY3-210ENST00000512331 TMEM132AQ24JP5 1023 aa12.29□□□□□ -0.44
RUFY3-210ENST00000512331 TIMELESSQ9UNS1 1208 aa12.29□□□□□ -0.44
RUFY3-210ENST00000512331 PAK3O75914 559 aaPredicted RBP12.27□□□□□ -0.45
RUFY3-210ENST00000512331 PRKAR2AP13861 404 aaKnown RBP12.27□□□□□ -0.45
RUFY3-210ENST00000512331 NLRP6P59044 892 aa12.25□□□□□ -0.45
RUFY3-210ENST00000512331 ARHGEF1Q92888 912 aaKnown RBP12.24□□□□□ -0.45
RUFY3-210ENST00000512331 PPP1R37O75864 691 aa12.23□□□□□ -0.45
RUFY3-210ENST00000512331 ERICH6Q7L0X2 663 aa12.23□□□□□ -0.45
RUFY3-210ENST00000512331 IFNL1Q8IU54 200 aa12.23□□□□□ -0.45
RUFY3-210ENST00000512331 SOX12O15370 315 aa12.22□□□□□ -0.45
RUFY3-210ENST00000512331 EFCAB3Q8N7B9 438 aa12.22□□□□□ -0.45
RUFY3-210ENST00000512331 FBXO22Q8NEZ5 403 aa12.22□□□□□ -0.45
RUFY3-210ENST00000512331 CABP2Q9NPB3 220 aa12.22□□□□□ -0.45
RUFY3-210ENST00000512331 E2F4Q16254 413 aa12.21□□□□□ -0.45
RUFY3-210ENST00000512331 PHF8Q9UPP1 1060 aa12.19□□□□□ -0.46
RUFY3-210ENST00000512331 MAP3K13O43283 966 aa12.18□□□□□ -0.46
RUFY3-210ENST00000512331 FXR2P51116 673 aaKnown RBP eCLIP12.16□□□□□ -0.46
RUFY3-210ENST00000512331 KIF12Q96FN5 646 aa12.16□□□□□ -0.46
RUFY3-210ENST00000512331 ZCCHC6Q5VYS8 1495 aaKnown RBP12.11□□□□□ -0.47
RUFY3-210ENST00000512331 TESPA1A2RU30 521 aaPredicted RBP12.11□□□□□ -0.47
RUFY3-210ENST00000512331 SEMA3EO15041 775 aa12.11□□□□□ -0.47
RUFY3-210ENST00000512331 ZC3H15Q8WU90 426 aaKnown RBP12.11□□□□□ -0.47
RUFY3-210ENST00000512331 BRPF1P55201 1214 aaPredicted RBP12.09□□□□□ -0.47
RUFY3-210ENST00000512331 NCKAP5LQ9HCH0 1330 aa12.08□□□□□ -0.48
RUFY3-210ENST00000512331 PDE4AP27815 886 aa12.07□□□□□ -0.48
RUFY3-210ENST00000512331 LARP6Q9BRS8 491 aaKnown RBP12.07□□□□□ -0.48
RUFY3-210ENST00000512331 MFSD10Q14728 455 aa12.04□□□□□ -0.48
RUFY3-210ENST00000512331 SMYD5Q6GMV2 418 aa12.04□□□□□ -0.48
RUFY3-210ENST00000512331 GOLGA2Q08379 1002 aa12.03□□□□□ -0.48
RUFY3-210ENST00000512331 MS4A4AQ96JQ5 239 aa12.03□□□□□ -0.48
RUFY3-210ENST00000512331 ZRANB1Q9UGI0 708 aa12.03□□□□□ -0.48
RUFY3-210ENST00000512331 NEUROD2Q15784 382 aa12.02□□□□□ -0.49
RUFY3-210ENST00000512331 C14orf37Q86TY3 774 aa12.02□□□□□ -0.49
RUFY3-210ENST00000512331 DDX27Q96GQ7 796 aaKnown RBP12.02□□□□□ -0.49
RUFY3-210ENST00000512331 SLC24A3Q9HC58 644 aa12.02□□□□□ -0.49
RUFY3-210ENST00000512331 PIP4P2Q8N4L2 257 aa12.01□□□□□ -0.49
RUFY3-210ENST00000512331 CRISPLD2Q9H0B8 497 aa12.01□□□□□ -0.49
RUFY3-210ENST00000512331 CHRDL2Q6WN34 429 aa11.99□□□□□ -0.49
RUFY3-210ENST00000512331 CD44P16070 742 aaKnown RBP11.98□□□□□ -0.49
RUFY3-210ENST00000512331 PHF12Q96QT6 1004 aa11.98□□□□□ -0.49
RUFY3-210ENST00000512331 ARIH1Q9Y4X5 557 aaPredicted RBP11.98□□□□□ -0.49
RUFY3-210ENST00000512331 TMEM106CQ9BVX2 250 aa11.97□□□□□ -0.49
RUFY3-210ENST00000512331 ZMYND10O75800 440 aa11.95□□□□□ -0.5
RUFY3-210ENST00000512331 MKRN3Q13064 507 aaKnown RBP11.94□□□□□ -0.5
RUFY3-210ENST00000512331 CAMK2BQ13554 666 aa11.94□□□□□ -0.5
RUFY3-210ENST00000512331 ARXQ96QS3 562 aa11.9□□□□□ -0.5
RUFY3-210ENST00000512331 DCAF1Q9Y4B6 1507 aa11.89□□□□□ -0.51
RUFY3-210ENST00000512331 BARGINQ6ZT62 677 aa11.88□□□□□ -0.51
RUFY3-210ENST00000512331 ABCC9O60706 1549 aa11.86□□□□□ -0.51
RUFY3-210ENST00000512331 PPP1R15BQ5SWA1 713 aa11.86□□□□□ -0.51
RUFY3-210ENST00000512331 MS4A3Q96HJ5 214 aa11.86□□□□□ -0.51
RUFY3-210ENST00000512331 TRPC6Q9Y210 931 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms