RNA–Protein interactions for RNA: ENST00000512094.5

NPHP3-210, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-210ENST00000512094 POTEB2H3BUK9 544 aa17.71■□□□□ 0.43
NPHP3-210ENST00000512094 ATMINO43313 823 aaPredicted RBP17.68■□□□□ 0.42
NPHP3-210ENST00000512094 OTUD5Q96G74 571 aa17.68■□□□□ 0.42
NPHP3-210ENST00000512094 KIF12Q96FN5 646 aa17.65■□□□□ 0.42
NPHP3-210ENST00000512094 RASEFQ8IZ41 740 aa17.64■□□□□ 0.41
NPHP3-210ENST00000512094 PLCD3Q8N3E9 789 aa17.64■□□□□ 0.41
NPHP3-210ENST00000512094 METRNQ9UJH8 293 aa17.64■□□□□ 0.41
NPHP3-210ENST00000512094 SLC39A7Q92504 469 aa17.63■□□□□ 0.41
NPHP3-210ENST00000512094 C7P10643 843 aa17.58■□□□□ 0.4
NPHP3-210ENST00000512094 FKBP8Q14318 412 aa17.55■□□□□ 0.4
NPHP3-210ENST00000512094 MAP3K13O43283 966 aa17.54■□□□□ 0.4
NPHP3-210ENST00000512094 ATN1P54259 1190 aaPredicted RBP17.54■□□□□ 0.4
NPHP3-210ENST00000512094 TRPC6Q9Y210 931 aa17.51■□□□□ 0.39
NPHP3-210ENST00000512094 BMP2KQ9NSY1 1161 aaPredicted RBP17.5■□□□□ 0.39
NPHP3-210ENST00000512094 ZBTB47Q9UFB7 747 aaPredicted RBP17.5■□□□□ 0.39
NPHP3-210ENST00000512094 POTEJP0CG39 1038 aa17.44■□□□□ 0.38
NPHP3-210ENST00000512094 TIE1P35590 1138 aa17.44■□□□□ 0.38
NPHP3-210ENST00000512094 NUBP1P53384 320 aa17.42■□□□□ 0.38
NPHP3-210ENST00000512094 MAMSTRQ6ZN01 415 aa17.39■□□□□ 0.37
NPHP3-210ENST00000512094 PCDHB13Q9Y5F0 798 aa17.36■□□□□ 0.37
NPHP3-210ENST00000512094 TTLL13PA6NNM8 815 aa17.35■□□□□ 0.37
NPHP3-210ENST00000512094 FAM212AQ96EL1 285 aa17.34■□□□□ 0.37
NPHP3-210ENST00000512094 SGIP1Q9BQI5 828 aa17.34■□□□□ 0.37
NPHP3-210ENST00000512094 POTEFA5A3E0 1075 aa17.33■□□□□ 0.36
NPHP3-210ENST00000512094 SCUBE2Q9NQ36 999 aa17.31■□□□□ 0.36
NPHP3-210ENST00000512094 PLSCR2Q9NRY7 297 aa17.29■□□□□ 0.36
NPHP3-210ENST00000512094 POTEMA6NI47 508 aa17.28■□□□□ 0.36
NPHP3-210ENST00000512094 SEC24BO95487 1268 aa17.25■□□□□ 0.35
NPHP3-210ENST00000512094 IFNL1Q8IU54 200 aa17.25■□□□□ 0.35
NPHP3-210ENST00000512094 TRIM35Q9UPQ4 493 aa17.25■□□□□ 0.35
NPHP3-210ENST00000512094 POTEGQ6S5H5 508 aa17.24■□□□□ 0.35
NPHP3-210ENST00000512094 COLQQ9Y215 455 aaPredicted RBP17.23■□□□□ 0.35
NPHP3-210ENST00000512094 FBXO3Q9UK99 471 aa17.22■□□□□ 0.35
NPHP3-210ENST00000512094 IER5LQ5T953 404 aa17.19■□□□□ 0.34
NPHP3-210ENST00000512094 TMEM106CQ9BVX2 250 aa17.16■□□□□ 0.34
NPHP3-210ENST00000512094 DCAF8Q5TAQ9 597 aa17.15■□□□□ 0.34
NPHP3-210ENST00000512094 PYGBP11216 843 aa17.1■□□□□ 0.33
NPHP3-210ENST00000512094 FAM163AQ96GL9 167 aaPredicted RBP17.09■□□□□ 0.33
NPHP3-210ENST00000512094 LCE2DQ5TA82 110 aaPredicted RBP17.08■□□□□ 0.32
NPHP3-210ENST00000512094 VASPP50552 380 aaPredicted RBP17.04■□□□□ 0.32
NPHP3-210ENST00000512094 PLCG2P16885 1265 aa17.02■□□□□ 0.32
NPHP3-210ENST00000512094 KLHL34Q8N239 644 aa17.02■□□□□ 0.32
NPHP3-210ENST00000512094 PCDHB8Q9UN66 801 aa16.99■□□□□ 0.31
NPHP3-210ENST00000512094 PCDH10Q9P2E7 1040 aa16.97■□□□□ 0.31
NPHP3-210ENST00000512094 IRX5P78411 483 aaPredicted RBP16.96■□□□□ 0.31
NPHP3-210ENST00000512094 GSE1Q14687 1217 aa16.94■□□□□ 0.3
NPHP3-210ENST00000512094 SLAIN1Q8ND83 568 aa16.92■□□□□ 0.3
NPHP3-210ENST00000512094 OCEL1Q9H607 264 aa16.88■□□□□ 0.29
NPHP3-210ENST00000512094 ZNF467Q7Z7K2 595 aaPredicted RBP16.85■□□□□ 0.29
NPHP3-210ENST00000512094 CHRM1P11229 460 aaPredicted RBP16.78■□□□□ 0.28
NPHP3-210ENST00000512094 GOLGA2Q08379 1002 aa16.75■□□□□ 0.27
NPHP3-210ENST00000512094 ST18O60284 1047 aa16.74■□□□□ 0.27
NPHP3-210ENST00000512094 MKRN3Q13064 507 aaKnown RBP16.72■□□□□ 0.27
NPHP3-210ENST00000512094 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.72■□□□□ 0.27
NPHP3-210ENST00000512094 PSEN1P49768 467 aa16.7■□□□□ 0.26
NPHP3-210ENST00000512094 IFNLR1Q8IU57 520 aaPredicted RBP16.7■□□□□ 0.26
NPHP3-210ENST00000512094 SPOCK2Q92563 424 aa16.7■□□□□ 0.26
NPHP3-210ENST00000512094 PDCD7Q8N8D1 485 aaKnown RBP16.69■□□□□ 0.26
NPHP3-210ENST00000512094 CDAN1Q8IWY9 1227 aa16.67■□□□□ 0.26
NPHP3-210ENST00000512094 CIZ1Q9ULV3 898 aaPredicted RBP16.66■□□□□ 0.26
NPHP3-210ENST00000512094 PDAP1Q13442 181 aaKnown RBP16.62■□□□□ 0.25
NPHP3-210ENST00000512094 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.62■□□□□ 0.252e-8■■■■□ 25.6
NPHP3-210ENST00000512094 C3orf67Q6ZVT6 689 aa16.61■□□□□ 0.25
NPHP3-210ENST00000512094 SNPHO15079 494 aa16.6■□□□□ 0.25
NPHP3-210ENST00000512094 L3MBTL3Q96JM7 780 aaPredicted RBP16.59■□□□□ 0.25
NPHP3-210ENST00000512094 TMEM121BQ9BXQ6 578 aaPredicted RBP16.56■□□□□ 0.24
NPHP3-210ENST00000512094 CABP2Q9NPB3 220 aa16.52■□□□□ 0.24
NPHP3-210ENST00000512094 ILDR1Q86SU0 546 aaPredicted RBP16.48■□□□□ 0.23
NPHP3-210ENST00000512094 MARVELD3Q96A59 401 aa16.46■□□□□ 0.23
NPHP3-210ENST00000512094 DPY19L2Q6NUT2 758 aa16.45■□□□□ 0.22
NPHP3-210ENST00000512094 TRIM41Q8WV44 630 aa16.4■□□□□ 0.22
NPHP3-210ENST00000512094 G3V3G9 751 aa16.39■□□□□ 0.21
NPHP3-210ENST00000512094 BOLA1Q9Y3E2 137 aa16.37■□□□□ 0.21
NPHP3-210ENST00000512094 EMP3P54852 163 aa16.35■□□□□ 0.21
NPHP3-210ENST00000512094 EFCAB3Q8N7B9 438 aa16.3■□□□□ 0.2
NPHP3-210ENST00000512094 SPNS2Q8IVW8 549 aa16.26■□□□□ 0.19
NPHP3-210ENST00000512094 MMRN1Q13201 1228 aa16.23■□□□□ 0.19
NPHP3-210ENST00000512094 FAM205CA6NFA0 338 aa16.22■□□□□ 0.19
NPHP3-210ENST00000512094 HS3ST6Q96QI5 342 aa16.22■□□□□ 0.19
NPHP3-210ENST00000512094 RIOK3O14730 519 aaKnown RBP16.2■□□□□ 0.18
NPHP3-210ENST00000512094 HOXB3P14651 431 aaPredicted RBP16.2■□□□□ 0.18
NPHP3-210ENST00000512094 POTEB3A0JP26 581 aa16.18■□□□□ 0.18
NPHP3-210ENST00000512094 POTEBQ6S5H4 581 aa16.18■□□□□ 0.18
NPHP3-210ENST00000512094 RNF25Q96BH1 459 aaPredicted RBP16.18■□□□□ 0.18
NPHP3-210ENST00000512094 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.15■□□□□ 0.18
NPHP3-210ENST00000512094 ZFP91Q96JP5 570 aaPredicted RBP16.15■□□□□ 0.18
NPHP3-210ENST00000512094 ZNF710Q8N1W2 664 aa16.14■□□□□ 0.17
NPHP3-210ENST00000512094 DOK7Q18PE1 504 aa16.13■□□□□ 0.17
NPHP3-210ENST00000512094 VGFO15240 615 aaPredicted RBP16.12■□□□□ 0.17
NPHP3-210ENST00000512094 MICALL2Q8IY33 904 aa16.12■□□□□ 0.17
NPHP3-210ENST00000512094 KRTAP3-3Q9BYR6 98 aa16.12■□□□□ 0.17
NPHP3-210ENST00000512094 KRTAP3-2Q9BYR7 98 aa16.12■□□□□ 0.17
NPHP3-210ENST00000512094 SOX12O15370 315 aa16.11■□□□□ 0.17
NPHP3-210ENST00000512094 HOXB1P14653 301 aaPredicted RBP16.09■□□□□ 0.17
NPHP3-210ENST00000512094 MS4A4AQ96JQ5 239 aa16.06■□□□□ 0.16
NPHP3-210ENST00000512094 PHF8Q9UPP1 1060 aa16.06■□□□□ 0.16
NPHP3-210ENST00000512094 RIMBP2O15034 1052 aa16.04■□□□□ 0.16
NPHP3-210ENST00000512094 TMEM92Q6UXU6 159 aa16.04■□□□□ 0.16
NPHP3-210ENST00000512094 ERBB3P21860 1342 aa16■□□□□ 0.15
NPHP3-210ENST00000512094 BCL11BQ9C0K0 894 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms