RNA–Protein interactions for RNA: ENST00000511817.1

XRCC4-205, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene XRCC4, Length 1,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-205ENST00000511817 PHF12Q96QT6 1004 aa10.45□□□□□ -0.74
XRCC4-205ENST00000511817 PAK3O75914 559 aaPredicted RBP10.44□□□□□ -0.74
XRCC4-205ENST00000511817 MMRN1Q13201 1228 aa10.44□□□□□ -0.74
XRCC4-205ENST00000511817 ATMINO43313 823 aaPredicted RBP10.41□□□□□ -0.74
XRCC4-205ENST00000511817 CREBZFQ9NS37 354 aa10.36□□□□□ -0.75
XRCC4-205ENST00000511817 SPNS2Q8IVW8 549 aa10.34□□□□□ -0.75
XRCC4-205ENST00000511817 MS4A3Q96HJ5 214 aa10.3□□□□□ -0.76
XRCC4-205ENST00000511817 POTEFA5A3E0 1075 aa10.22□□□□□ -0.77
XRCC4-205ENST00000511817 ATN1P54259 1190 aaPredicted RBP10.21□□□□□ -0.78
XRCC4-205ENST00000511817 ST18O60284 1047 aa10.2□□□□□ -0.78
XRCC4-205ENST00000511817 STAG3Q9UJ98 1225 aa10.2□□□□□ -0.78
XRCC4-205ENST00000511817 NPM1P06748 294 aaKnown RBP eCLIP10.18□□□□□ -0.78
XRCC4-205ENST00000511817 TMEM121BQ9BXQ6 578 aaPredicted RBP10.11□□□□□ -0.79
XRCC4-205ENST00000511817 BMP2KQ9NSY1 1161 aaPredicted RBP10.07□□□□□ -0.8
XRCC4-205ENST00000511817 MNX1P50219 401 aaPredicted RBP10.05□□□□□ -0.8
XRCC4-205ENST00000511817 SLAIN1Q8ND83 568 aa10.05□□□□□ -0.8
XRCC4-205ENST00000511817 COLQQ9Y215 455 aaPredicted RBP10.04□□□□□ -0.8
XRCC4-205ENST00000511817 SEC24BO95487 1268 aa10.03□□□□□ -0.8
XRCC4-205ENST00000511817 TIE1P35590 1138 aa10.01□□□□□ -0.81
XRCC4-205ENST00000511817 IER5LQ5T953 404 aa9.96□□□□□ -0.82
XRCC4-205ENST00000511817 KIF12Q96FN5 646 aa9.95□□□□□ -0.82
XRCC4-205ENST00000511817 CCDC61Q9Y6R9 512 aa9.94□□□□□ -0.82
XRCC4-205ENST00000511817 SPDYE4A6NLX3 237 aa9.93□□□□□ -0.82
XRCC4-205ENST00000511817 TRPC6Q9Y210 931 aa9.93□□□□□ -0.82
XRCC4-205ENST00000511817 SNPHO15079 494 aa9.92□□□□□ -0.82
XRCC4-205ENST00000511817 TTLL13PA6NNM8 815 aa9.89□□□□□ -0.83
XRCC4-205ENST00000511817 MARVELD3Q96A59 401 aa9.89□□□□□ -0.83
XRCC4-205ENST00000511817 KRTAP3-3Q9BYR6 98 aa9.88□□□□□ -0.83
XRCC4-205ENST00000511817 KRTAP3-2Q9BYR7 98 aa9.88□□□□□ -0.83
XRCC4-205ENST00000511817 TSPYL2Q9H2G4 693 aaPredicted RBP9.88□□□□□ -0.83
XRCC4-205ENST00000511817 TRIM35Q9UPQ4 493 aa9.82□□□□□ -0.84
XRCC4-205ENST00000511817 MAP3K13O43283 966 aa9.79□□□□□ -0.84
XRCC4-205ENST00000511817 EMP3P54852 163 aa9.78□□□□□ -0.84
XRCC4-205ENST00000511817 CSRNP3Q8WYN3 585 aa9.78□□□□□ -0.84
XRCC4-205ENST00000511817 PLCG2P16885 1265 aa9.75□□□□□ -0.85
XRCC4-205ENST00000511817 HS3ST6Q96QI5 342 aa9.74□□□□□ -0.85
XRCC4-205ENST00000511817 POTEB3A0JP26 581 aa9.71□□□□□ -0.85
XRCC4-205ENST00000511817 POTEBQ6S5H4 581 aa9.71□□□□□ -0.85
XRCC4-205ENST00000511817 RNF166Q96A37 237 aaPredicted RBP9.71□□□□□ -0.86
XRCC4-205ENST00000511817 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.7□□□□□ -0.86
XRCC4-205ENST00000511817 SGIP1Q9BQI5 828 aa9.68□□□□□ -0.86
XRCC4-205ENST00000511817 FAM205CA6NFA0 338 aa9.67□□□□□ -0.86
XRCC4-205ENST00000511817 IRX5P78411 483 aaPredicted RBP9.67□□□□□ -0.86
XRCC4-205ENST00000511817 PROM2Q8N271 834 aa9.66□□□□□ -0.86
XRCC4-205ENST00000511817 RASEFQ8IZ41 740 aa9.62□□□□□ -0.87
XRCC4-205ENST00000511817 PLEKHG5O94827 1062 aa9.59□□□□□ -0.87
XRCC4-205ENST00000511817 OCEL1Q9H607 264 aa9.59□□□□□ -0.87
XRCC4-205ENST00000511817 PCDHB13Q9Y5F0 798 aa9.58□□□□□ -0.88
XRCC4-205ENST00000511817 TMEM106CQ9BVX2 250 aa9.56□□□□□ -0.88
XRCC4-205ENST00000511817 MYT1LQ9UL68 1186 aa9.55□□□□□ -0.88
XRCC4-205ENST00000511817 MIER1Q8N108 512 aa9.53□□□□□ -0.88
XRCC4-205ENST00000511817 IFNL1Q8IU54 200 aa9.49□□□□□ -0.89
XRCC4-205ENST00000511817 C3orf67Q6ZVT6 689 aa9.48□□□□□ -0.89
XRCC4-205ENST00000511817 PTGER2P43116 358 aa9.45□□□□□ -0.9
XRCC4-205ENST00000511817 NUBP1P53384 320 aa9.42□□□□□ -0.9
XRCC4-205ENST00000511817 PLCD3Q8N3E9 789 aa9.39□□□□□ -0.91
XRCC4-205ENST00000511817 ZBTB47Q9UFB7 747 aaPredicted RBP9.39□□□□□ -0.91
XRCC4-205ENST00000511817 L3MBTL3Q96JM7 780 aaPredicted RBP9.38□□□□□ -0.91
XRCC4-205ENST00000511817 HOXB1P14653 301 aaPredicted RBP9.37□□□□□ -0.91
XRCC4-205ENST00000511817 ERBB3P21860 1342 aa9.36□□□□□ -0.91
XRCC4-205ENST00000511817 FAM212AQ96EL1 285 aa9.36□□□□□ -0.91
XRCC4-205ENST00000511817 PDCD7Q8N8D1 485 aaKnown RBP9.35□□□□□ -0.91
XRCC4-205ENST00000511817 HOXB3P14651 431 aaPredicted RBP9.32□□□□□ -0.92
XRCC4-205ENST00000511817 EHMT2Q96KQ7 1210 aa9.32□□□□□ -0.92
XRCC4-205ENST00000511817 PLA2G2EQ9NZK7 142 aa9.31□□□□□ -0.92
XRCC4-205ENST00000511817 ZNF710Q8N1W2 664 aa9.27□□□□□ -0.92
XRCC4-205ENST00000511817 VARS2Q5ST30 1063 aaKnown RBP9.26□□□□□ -0.93
XRCC4-205ENST00000511817 ZNF687Q8N1G0 1237 aa9.26□□□□□ -0.93
XRCC4-205ENST00000511817 DOK7Q18PE1 504 aa9.23□□□□□ -0.93
XRCC4-205ENST00000511817 PCDHB8Q9UN66 801 aa9.23□□□□□ -0.93
XRCC4-205ENST00000511817 PYGBP11216 843 aa9.22□□□□□ -0.93
XRCC4-205ENST00000511817 DCAF8Q5TAQ9 597 aa9.21□□□□□ -0.93
XRCC4-205ENST00000511817 RIMBP2O15034 1052 aa9.16□□□□□ -0.94
XRCC4-205ENST00000511817 MKRN3Q13064 507 aaKnown RBP9.16□□□□□ -0.94
XRCC4-205ENST00000511817 GOLGA2Q08379 1002 aa9.14□□□□□ -0.95
XRCC4-205ENST00000511817 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.13□□□□□ -0.95
XRCC4-205ENST00000511817 HCSTQ9UBK5 93 aa9.13□□□□□ -0.95
XRCC4-205ENST00000511817 ANKRD13DQ6ZTN6 518 aa9.12□□□□□ -0.95
XRCC4-205ENST00000511817 ZNF467Q7Z7K2 595 aaPredicted RBP9.12□□□□□ -0.95
XRCC4-205ENST00000511817 ZSWIM6Q9HCJ5 1215 aa9.11□□□□□ -0.95
XRCC4-205ENST00000511817 ILDR1Q86SU0 546 aaPredicted RBP9.1□□□□□ -0.95
XRCC4-205ENST00000511817 RGS20O76081 388 aa9.08□□□□□ -0.96
XRCC4-205ENST00000511817 IRX2Q9BZI1 471 aaPredicted RBP9.08□□□□□ -0.96
XRCC4-205ENST00000511817 G3V3G9 751 aa9.06□□□□□ -0.96
XRCC4-205ENST00000511817 LSM11P83369 360 aaKnown RBP eCLIP9.06□□□□□ -0.961e-11■■■■■ 50.1
XRCC4-205ENST00000511817 PSEN1P49768 467 aa9.05□□□□□ -0.96
XRCC4-205ENST00000511817 BOLA1Q9Y3E2 137 aa9.05□□□□□ -0.96
XRCC4-205ENST00000511817 CHRM1P11229 460 aaPredicted RBP9.03□□□□□ -0.96
XRCC4-205ENST00000511817 GSE1Q14687 1217 aa9.03□□□□□ -0.96
XRCC4-205ENST00000511817 DPY19L2Q6NUT2 758 aa9.03□□□□□ -0.96
XRCC4-205ENST00000511817 GPR153Q6NV75 609 aa8.99□□□□□ -0.97
XRCC4-205ENST00000511817 PDAP1Q13442 181 aaKnown RBP8.95□□□□□ -0.98
XRCC4-205ENST00000511817 PBX2P40425 430 aa8.94□□□□□ -0.98
XRCC4-205ENST00000511817 CABP2Q9NPB3 220 aa8.92□□□□□ -0.98
XRCC4-205ENST00000511817 FBXO3Q9UK99 471 aa8.91□□□□□ -0.98
XRCC4-205ENST00000511817 ZNF316A6NFI3 1004 aaPredicted RBP8.91□□□□□ -0.98
XRCC4-205ENST00000511817 FKBP8Q14318 412 aa8.89□□□□□ -0.99
XRCC4-205ENST00000511817 KLHL34Q8N239 644 aa8.89□□□□□ -0.99
XRCC4-205ENST00000511817 IFFO2Q5TF58 517 aa8.87□□□□□ -0.99
XRCC4-205ENST00000511817 ARSIQ5FYB1 569 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms