RNA–Protein interactions for RNA: ENST00000511551.2

SCAMP1-204, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 559 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-204ENST00000511551 ATMINO43313 823 aaPredicted RBP12.07□□□□□ -0.48
SCAMP1-204ENST00000511551 MIER1Q8N108 512 aa12.07□□□□□ -0.48
SCAMP1-204ENST00000511551 PLEKHG5O94827 1062 aa12.06□□□□□ -0.48
SCAMP1-204ENST00000511551 KIF12Q96FN5 646 aa12.05□□□□□ -0.48
SCAMP1-204ENST00000511551 C7P10643 843 aa12.02□□□□□ -0.49
SCAMP1-204ENST00000511551 SLC39A7Q92504 469 aa12.02□□□□□ -0.49
SCAMP1-204ENST00000511551 METRNQ9UJH8 293 aa12□□□□□ -0.49
SCAMP1-204ENST00000511551 RASEFQ8IZ41 740 aa11.99□□□□□ -0.49
SCAMP1-204ENST00000511551 ATN1P54259 1190 aaPredicted RBP11.96□□□□□ -0.49
SCAMP1-204ENST00000511551 MAP3K13O43283 966 aa11.95□□□□□ -0.5
SCAMP1-204ENST00000511551 PLCD3Q8N3E9 789 aa11.94□□□□□ -0.5
SCAMP1-204ENST00000511551 POTEJP0CG39 1038 aa11.93□□□□□ -0.5
SCAMP1-204ENST00000511551 BMP2KQ9NSY1 1161 aaPredicted RBP11.91□□□□□ -0.5
SCAMP1-204ENST00000511551 TRPC6Q9Y210 931 aa11.91□□□□□ -0.5
SCAMP1-204ENST00000511551 TIE1P35590 1138 aa11.9□□□□□ -0.5
SCAMP1-204ENST00000511551 ZBTB47Q9UFB7 747 aaPredicted RBP11.9□□□□□ -0.5
SCAMP1-204ENST00000511551 NUBP1P53384 320 aa11.89□□□□□ -0.51
SCAMP1-204ENST00000511551 MAMSTRQ6ZN01 415 aa11.88□□□□□ -0.51
SCAMP1-204ENST00000511551 SGIP1Q9BQI5 828 aa11.88□□□□□ -0.51
SCAMP1-204ENST00000511551 FKBP8Q14318 412 aa11.87□□□□□ -0.51
SCAMP1-204ENST00000511551 POTEFA5A3E0 1075 aa11.85□□□□□ -0.51
SCAMP1-204ENST00000511551 TTLL13PA6NNM8 815 aa11.82□□□□□ -0.52
SCAMP1-204ENST00000511551 PCDHB13Q9Y5F0 798 aa11.8□□□□□ -0.52
SCAMP1-204ENST00000511551 POTEMA6NI47 508 aa11.77□□□□□ -0.53
SCAMP1-204ENST00000511551 SCUBE2Q9NQ36 999 aa11.77□□□□□ -0.53
SCAMP1-204ENST00000511551 FAM212AQ96EL1 285 aa11.76□□□□□ -0.53
SCAMP1-204ENST00000511551 POTEGQ6S5H5 508 aa11.75□□□□□ -0.53
SCAMP1-204ENST00000511551 COLQQ9Y215 455 aaPredicted RBP11.75□□□□□ -0.53
SCAMP1-204ENST00000511551 IER5LQ5T953 404 aa11.74□□□□□ -0.53
SCAMP1-204ENST00000511551 IFNL1Q8IU54 200 aa11.74□□□□□ -0.53
SCAMP1-204ENST00000511551 PLSCR2Q9NRY7 297 aa11.73□□□□□ -0.53
SCAMP1-204ENST00000511551 FBXO3Q9UK99 471 aa11.72□□□□□ -0.53
SCAMP1-204ENST00000511551 TRIM35Q9UPQ4 493 aa11.72□□□□□ -0.53
SCAMP1-204ENST00000511551 SEC24BO95487 1268 aa11.71□□□□□ -0.53
SCAMP1-204ENST00000511551 LCE2DQ5TA82 110 aaPredicted RBP11.69□□□□□ -0.54
SCAMP1-204ENST00000511551 PCDH10Q9P2E7 1040 aa11.67□□□□□ -0.54
SCAMP1-204ENST00000511551 TMEM106CQ9BVX2 250 aa11.66□□□□□ -0.54
SCAMP1-204ENST00000511551 DCAF8Q5TAQ9 597 aa11.65□□□□□ -0.54
SCAMP1-204ENST00000511551 FAM163AQ96GL9 167 aaPredicted RBP11.63□□□□□ -0.55
SCAMP1-204ENST00000511551 PYGBP11216 843 aa11.6□□□□□ -0.55
SCAMP1-204ENST00000511551 IRX5P78411 483 aaPredicted RBP11.58□□□□□ -0.56
SCAMP1-204ENST00000511551 PLCG2P16885 1265 aa11.55□□□□□ -0.56
SCAMP1-204ENST00000511551 VASPP50552 380 aaPredicted RBP11.55□□□□□ -0.56
SCAMP1-204ENST00000511551 PCDHB8Q9UN66 801 aa11.54□□□□□ -0.56
SCAMP1-204ENST00000511551 GSE1Q14687 1217 aa11.52□□□□□ -0.57
SCAMP1-204ENST00000511551 OCEL1Q9H607 264 aa11.52□□□□□ -0.57
SCAMP1-204ENST00000511551 KLHL34Q8N239 644 aa11.51□□□□□ -0.57
SCAMP1-204ENST00000511551 CHRM1P11229 460 aaPredicted RBP11.5□□□□□ -0.57
SCAMP1-204ENST00000511551 SLAIN1Q8ND83 568 aa11.49□□□□□ -0.57
SCAMP1-204ENST00000511551 ZNF467Q7Z7K2 595 aaPredicted RBP11.47□□□□□ -0.57
SCAMP1-204ENST00000511551 ST18O60284 1047 aa11.42□□□□□ -0.58
SCAMP1-204ENST00000511551 PDCD7Q8N8D1 485 aaKnown RBP11.39□□□□□ -0.59
SCAMP1-204ENST00000511551 CDAN1Q8IWY9 1227 aa11.37□□□□□ -0.59
SCAMP1-204ENST00000511551 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.37□□□□□ -0.59
SCAMP1-204ENST00000511551 IFNLR1Q8IU57 520 aaPredicted RBP11.36□□□□□ -0.59
SCAMP1-204ENST00000511551 PSEN1P49768 467 aa11.35□□□□□ -0.59
SCAMP1-204ENST00000511551 MKRN3Q13064 507 aaKnown RBP11.35□□□□□ -0.59
SCAMP1-204ENST00000511551 SPOCK2Q92563 424 aa11.35□□□□□ -0.59
SCAMP1-204ENST00000511551 SNPHO15079 494 aa11.33□□□□□ -0.6
SCAMP1-204ENST00000511551 GOLGA2Q08379 1002 aa11.33□□□□□ -0.6
SCAMP1-204ENST00000511551 ILDR1Q86SU0 546 aaPredicted RBP11.32□□□□□ -0.6
SCAMP1-204ENST00000511551 TMEM121BQ9BXQ6 578 aaPredicted RBP11.32□□□□□ -0.6
SCAMP1-204ENST00000511551 L3MBTL3Q96JM7 780 aaPredicted RBP11.31□□□□□ -0.6
SCAMP1-204ENST00000511551 PDAP1Q13442 181 aaKnown RBP11.3□□□□□ -0.6
SCAMP1-204ENST00000511551 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.29□□□□□ -0.65e-8■□□□□ 9.7
SCAMP1-204ENST00000511551 CIZ1Q9ULV3 898 aaPredicted RBP11.26□□□□□ -0.61
SCAMP1-204ENST00000511551 C3orf67Q6ZVT6 689 aa11.25□□□□□ -0.61
SCAMP1-204ENST00000511551 DPY19L2Q6NUT2 758 aa11.2□□□□□ -0.62
SCAMP1-204ENST00000511551 CABP2Q9NPB3 220 aa11.2□□□□□ -0.62
SCAMP1-204ENST00000511551 TRIM41Q8WV44 630 aa11.17□□□□□ -0.62
SCAMP1-204ENST00000511551 MARVELD3Q96A59 401 aa11.17□□□□□ -0.62
SCAMP1-204ENST00000511551 BOLA1Q9Y3E2 137 aa11.14□□□□□ -0.63
SCAMP1-204ENST00000511551 SPNS2Q8IVW8 549 aa11.11□□□□□ -0.63
SCAMP1-204ENST00000511551 EMP3P54852 163 aa11.09□□□□□ -0.63
SCAMP1-204ENST00000511551 G3V3G9 751 aa11.08□□□□□ -0.64
SCAMP1-204ENST00000511551 MMRN1Q13201 1228 aa11.07□□□□□ -0.64
SCAMP1-204ENST00000511551 EFCAB3Q8N7B9 438 aa11.07□□□□□ -0.64
SCAMP1-204ENST00000511551 POTEB3A0JP26 581 aa11.06□□□□□ -0.64
SCAMP1-204ENST00000511551 HOXB3P14651 431 aaPredicted RBP11.06□□□□□ -0.64
SCAMP1-204ENST00000511551 POTEBQ6S5H4 581 aa11.06□□□□□ -0.64
SCAMP1-204ENST00000511551 HS3ST6Q96QI5 342 aa11.04□□□□□ -0.64
SCAMP1-204ENST00000511551 FAM205CA6NFA0 338 aa11.01□□□□□ -0.65
SCAMP1-204ENST00000511551 RIOK3O14730 519 aaKnown RBP11□□□□□ -0.65
SCAMP1-204ENST00000511551 SOX12O15370 315 aa11□□□□□ -0.65
SCAMP1-204ENST00000511551 RNF25Q96BH1 459 aaPredicted RBP11□□□□□ -0.65
SCAMP1-204ENST00000511551 KRTAP3-3Q9BYR6 98 aa11□□□□□ -0.65
SCAMP1-204ENST00000511551 KRTAP3-2Q9BYR7 98 aa11□□□□□ -0.65
SCAMP1-204ENST00000511551 HOXB1P14653 301 aaPredicted RBP10.98□□□□□ -0.65
SCAMP1-204ENST00000511551 DOK7Q18PE1 504 aa10.97□□□□□ -0.65
SCAMP1-204ENST00000511551 VGFO15240 615 aaPredicted RBP10.96□□□□□ -0.65
SCAMP1-204ENST00000511551 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.95□□□□□ -0.66
SCAMP1-204ENST00000511551 MICALL2Q8IY33 904 aa10.95□□□□□ -0.66
SCAMP1-204ENST00000511551 ZNF710Q8N1W2 664 aa10.95□□□□□ -0.66
SCAMP1-204ENST00000511551 ZFP91Q96JP5 570 aaPredicted RBP10.95□□□□□ -0.66
SCAMP1-204ENST00000511551 MS4A4AQ96JQ5 239 aa10.94□□□□□ -0.66
SCAMP1-204ENST00000511551 TMEM92Q6UXU6 159 aa10.93□□□□□ -0.66
SCAMP1-204ENST00000511551 PHF8Q9UPP1 1060 aa10.9□□□□□ -0.66
SCAMP1-204ENST00000511551 RIMBP2O15034 1052 aa10.89□□□□□ -0.67
SCAMP1-204ENST00000511551 ZSWIM6Q9HCJ5 1215 aa10.88□□□□□ -0.67
SCAMP1-204ENST00000511551 ERBB3P21860 1342 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms