RNA–Protein interactions for RNA: ENST00000511391.1

ARRDC3-206, Transcript of arrestin domain containing 3, humanhuman

TSL 2

Gene ARRDC3, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC3-206ENST00000511391 METRNQ9UJH8 293 aa15.72■□□□□ 0.11
ARRDC3-206ENST00000511391 ATMINO43313 823 aaPredicted RBP15.7■□□□□ 0.1
ARRDC3-206ENST00000511391 SLC39A7Q92504 469 aa15.64■□□□□ 0.09
ARRDC3-206ENST00000511391 C7P10643 843 aa15.63■□□□□ 0.09
ARRDC3-206ENST00000511391 LCE2DQ5TA82 110 aaPredicted RBP15.59■□□□□ 0.09
ARRDC3-206ENST00000511391 CCDC61Q9Y6R9 512 aa15.55■□□□□ 0.08
ARRDC3-206ENST00000511391 ATN1P54259 1190 aaPredicted RBP15.53■□□□□ 0.08
ARRDC3-206ENST00000511391 PROM2Q8N271 834 aa15.53■□□□□ 0.08
ARRDC3-206ENST00000511391 TSPYL2Q9H2G4 693 aaPredicted RBP15.53■□□□□ 0.08
ARRDC3-206ENST00000511391 EHMT2Q96KQ7 1210 aa15.52■□□□□ 0.08
ARRDC3-206ENST00000511391 MAMSTRQ6ZN01 415 aa15.5■□□□□ 0.07
ARRDC3-206ENST00000511391 PCDH10Q9P2E7 1040 aa15.49■□□□□ 0.07
ARRDC3-206ENST00000511391 POTEFA5A3E0 1075 aa15.48■□□□□ 0.07
ARRDC3-206ENST00000511391 KIF12Q96FN5 646 aa15.47■□□□□ 0.07
ARRDC3-206ENST00000511391 TRPC6Q9Y210 931 aa15.46■□□□□ 0.07
ARRDC3-206ENST00000511391 BMP2KQ9NSY1 1161 aaPredicted RBP15.44■□□□□ 0.06
ARRDC3-206ENST00000511391 SCUBE2Q9NQ36 999 aa15.4■□□□□ 0.06
ARRDC3-206ENST00000511391 FAM163AQ96GL9 167 aaPredicted RBP15.38■□□□□ 0.05
ARRDC3-206ENST00000511391 MAP3K13O43283 966 aa15.35■□□□□ 0.05
ARRDC3-206ENST00000511391 TIE1P35590 1138 aa15.32■□□□□ 0.04
ARRDC3-206ENST00000511391 RASEFQ8IZ41 740 aa15.32■□□□□ 0.04
ARRDC3-206ENST00000511391 COLQQ9Y215 455 aaPredicted RBP15.3■□□□□ 0.04
ARRDC3-206ENST00000511391 TTLL13PA6NNM8 815 aa15.26■□□□□ 0.03
ARRDC3-206ENST00000511391 MIER1Q8N108 512 aa15.17■□□□□ 0.02
ARRDC3-206ENST00000511391 SEC24BO95487 1268 aa15.15■□□□□ 0.02
ARRDC3-206ENST00000511391 TRIM35Q9UPQ4 493 aa15.14■□□□□ 0.01
ARRDC3-206ENST00000511391 PLEKHG5O94827 1062 aa15.12■□□□□ 0.01
ARRDC3-206ENST00000511391 IER5LQ5T953 404 aa15.12■□□□□ 0.01
ARRDC3-206ENST00000511391 CDAN1Q8IWY9 1227 aa15.09■□□□□ 0.01
ARRDC3-206ENST00000511391 SGIP1Q9BQI5 828 aa15.09■□□□□ 0.01
ARRDC3-206ENST00000511391 PCDHB13Q9Y5F0 798 aa15.08■□□□□ 0
ARRDC3-206ENST00000511391 NUBP1P53384 320 aa15.04■□□□□ -0
ARRDC3-206ENST00000511391 IFNL1Q8IU54 200 aa15.03■□□□□ -0
ARRDC3-206ENST00000511391 ST18O60284 1047 aa15.01□□□□□ -0.01
ARRDC3-206ENST00000511391 SLAIN1Q8ND83 568 aa15□□□□□ -0.01
ARRDC3-206ENST00000511391 PLCD3Q8N3E9 789 aa14.98□□□□□ -0.01
ARRDC3-206ENST00000511391 TMEM106CQ9BVX2 250 aa14.96□□□□□ -0.01
ARRDC3-206ENST00000511391 IRX5P78411 483 aaPredicted RBP14.93□□□□□ -0.02
ARRDC3-206ENST00000511391 PLCG2P16885 1265 aa14.9□□□□□ -0.02
ARRDC3-206ENST00000511391 ZBTB47Q9UFB7 747 aaPredicted RBP14.88□□□□□ -0.03
ARRDC3-206ENST00000511391 FAM212AQ96EL1 285 aa14.86□□□□□ -0.03
ARRDC3-206ENST00000511391 MMRN1Q13201 1228 aa14.78□□□□□ -0.04
ARRDC3-206ENST00000511391 OCEL1Q9H607 264 aa14.78□□□□□ -0.04
ARRDC3-206ENST00000511391 TMEM121BQ9BXQ6 578 aaPredicted RBP14.77□□□□□ -0.05
ARRDC3-206ENST00000511391 SPNS2Q8IVW8 549 aa14.76□□□□□ -0.05
ARRDC3-206ENST00000511391 PYGBP11216 843 aa14.71□□□□□ -0.05
ARRDC3-206ENST00000511391 MARVELD3Q96A59 401 aa14.71□□□□□ -0.05
ARRDC3-206ENST00000511391 PCDHB8Q9UN66 801 aa14.69□□□□□ -0.06
ARRDC3-206ENST00000511391 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.68□□□□□ -0.06
ARRDC3-206ENST00000511391 SNPHO15079 494 aa14.66□□□□□ -0.06
ARRDC3-206ENST00000511391 PDCD7Q8N8D1 485 aaKnown RBP14.65□□□□□ -0.06
ARRDC3-206ENST00000511391 DCAF8Q5TAQ9 597 aa14.63□□□□□ -0.07
ARRDC3-206ENST00000511391 FKBP8Q14318 412 aa14.55□□□□□ -0.08
ARRDC3-206ENST00000511391 POTEB3A0JP26 581 aa14.54□□□□□ -0.08
ARRDC3-206ENST00000511391 POTEBQ6S5H4 581 aa14.54□□□□□ -0.08
ARRDC3-206ENST00000511391 KRTAP3-3Q9BYR6 98 aa14.53□□□□□ -0.08
ARRDC3-206ENST00000511391 KRTAP3-2Q9BYR7 98 aa14.53□□□□□ -0.08
ARRDC3-206ENST00000511391 EMP3P54852 163 aa14.52□□□□□ -0.09
ARRDC3-206ENST00000511391 C3orf67Q6ZVT6 689 aa14.51□□□□□ -0.09
ARRDC3-206ENST00000511391 HS3ST6Q96QI5 342 aa14.46□□□□□ -0.09
ARRDC3-206ENST00000511391 ZNF467Q7Z7K2 595 aaPredicted RBP14.45□□□□□ -0.1
ARRDC3-206ENST00000511391 L3MBTL3Q96JM7 780 aaPredicted RBP14.45□□□□□ -0.1
ARRDC3-206ENST00000511391 MKRN3Q13064 507 aaKnown RBP14.44□□□□□ -0.1
ARRDC3-206ENST00000511391 ILDR1Q86SU0 546 aaPredicted RBP14.42□□□□□ -0.1
ARRDC3-206ENST00000511391 FAM205CA6NFA0 338 aa14.41□□□□□ -0.1
ARRDC3-206ENST00000511391 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.41□□□□□ -0.1
ARRDC3-206ENST00000511391 GOLGA2Q08379 1002 aa14.39□□□□□ -0.11
ARRDC3-206ENST00000511391 CHRM1P11229 460 aaPredicted RBP14.37□□□□□ -0.11
ARRDC3-206ENST00000511391 PSEN1P49768 467 aa14.37□□□□□ -0.11
ARRDC3-206ENST00000511391 GSE1Q14687 1217 aa14.37□□□□□ -0.11
ARRDC3-206ENST00000511391 DPY19L2Q6NUT2 758 aa14.35□□□□□ -0.11
ARRDC3-206ENST00000511391 FBXO3Q9UK99 471 aa14.34□□□□□ -0.11
ARRDC3-206ENST00000511391 HOXB3P14651 431 aaPredicted RBP14.32□□□□□ -0.12
ARRDC3-206ENST00000511391 VASPP50552 380 aaPredicted RBP14.29□□□□□ -0.12
ARRDC3-206ENST00000511391 KLHL34Q8N239 644 aa14.27□□□□□ -0.13
ARRDC3-206ENST00000511391 PDAP1Q13442 181 aaKnown RBP14.25□□□□□ -0.13
ARRDC3-206ENST00000511391 BOLA1Q9Y3E2 137 aa14.23□□□□□ -0.13
ARRDC3-206ENST00000511391 CABP2Q9NPB3 220 aa14.21□□□□□ -0.13
ARRDC3-206ENST00000511391 HOXB1P14653 301 aaPredicted RBP14.2□□□□□ -0.14
ARRDC3-206ENST00000511391 ZNF710Q8N1W2 664 aa14.12□□□□□ -0.15
ARRDC3-206ENST00000511391 G3V3G9 751 aa14.11□□□□□ -0.15
ARRDC3-206ENST00000511391 ERBB3P21860 1342 aa14.11□□□□□ -0.15
ARRDC3-206ENST00000511391 DOK7Q18PE1 504 aa14.1□□□□□ -0.15
ARRDC3-206ENST00000511391 RNF166Q96A37 237 aaPredicted RBP14.08□□□□□ -0.16
ARRDC3-206ENST00000511391 VARS2Q5ST30 1063 aaKnown RBP14.05□□□□□ -0.16
ARRDC3-206ENST00000511391 TMEM92Q6UXU6 159 aa14.03□□□□□ -0.16
ARRDC3-206ENST00000511391 IFNLR1Q8IU57 520 aaPredicted RBP14.02□□□□□ -0.17
ARRDC3-206ENST00000511391 CIZ1Q9ULV3 898 aaPredicted RBP14.01□□□□□ -0.17
ARRDC3-206ENST00000511391 SPOCK2Q92563 424 aa14□□□□□ -0.17
ARRDC3-206ENST00000511391 EFCAB3Q8N7B9 438 aa13.99□□□□□ -0.17
ARRDC3-206ENST00000511391 MYT1LQ9UL68 1186 aa13.98□□□□□ -0.17
ARRDC3-206ENST00000511391 RIMBP2O15034 1052 aa13.97□□□□□ -0.17
ARRDC3-206ENST00000511391 MICALL2Q8IY33 904 aa13.96□□□□□ -0.17
ARRDC3-206ENST00000511391 ZNF687Q8N1G0 1237 aa13.95□□□□□ -0.18
ARRDC3-206ENST00000511391 GPR153Q6NV75 609 aa13.94□□□□□ -0.18
ARRDC3-206ENST00000511391 ZSWIM6Q9HCJ5 1215 aa13.94□□□□□ -0.18
ARRDC3-206ENST00000511391 MS4A4AQ96JQ5 239 aa13.87□□□□□ -0.19
ARRDC3-206ENST00000511391 PTGER2P43116 358 aa13.81□□□□□ -0.2
ARRDC3-206ENST00000511391 ARSIQ5FYB1 569 aa13.79□□□□□ -0.2
ARRDC3-206ENST00000511391 TRIM41Q8WV44 630 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms