RNA–Protein interactions for RNA: ENST00000511249.5

MATR3-216, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-216ENST00000511249 POTEGQ6S5H5 508 aa11.91□□□□□ -0.5
MATR3-216ENST00000511249 SLC39A7Q92504 469 aa11.91□□□□□ -0.5
MATR3-216ENST00000511249 METRNQ9UJH8 293 aa11.91□□□□□ -0.5
MATR3-216ENST00000511249 ATMINO43313 823 aaPredicted RBP11.89□□□□□ -0.51
MATR3-216ENST00000511249 MAMSTRQ6ZN01 415 aa11.86□□□□□ -0.51
MATR3-216ENST00000511249 PCDH10Q9P2E7 1040 aa11.86□□□□□ -0.51
MATR3-216ENST00000511249 POTEJP0CG39 1038 aa11.83□□□□□ -0.52
MATR3-216ENST00000511249 TSPYL2Q9H2G4 693 aaPredicted RBP11.79□□□□□ -0.52
MATR3-216ENST00000511249 CCDC61Q9Y6R9 512 aa11.78□□□□□ -0.52
MATR3-216ENST00000511249 ATN1P54259 1190 aaPredicted RBP11.76□□□□□ -0.53
MATR3-216ENST00000511249 SCUBE2Q9NQ36 999 aa11.76□□□□□ -0.53
MATR3-216ENST00000511249 PROM2Q8N271 834 aa11.75□□□□□ -0.53
MATR3-216ENST00000511249 KIF12Q96FN5 646 aa11.73□□□□□ -0.53
MATR3-216ENST00000511249 LCE2DQ5TA82 110 aaPredicted RBP11.7□□□□□ -0.54
MATR3-216ENST00000511249 BMP2KQ9NSY1 1161 aaPredicted RBP11.69□□□□□ -0.54
MATR3-216ENST00000511249 FAM163AQ96GL9 167 aaPredicted RBP11.68□□□□□ -0.54
MATR3-216ENST00000511249 TIE1P35590 1138 aa11.66□□□□□ -0.54
MATR3-216ENST00000511249 POTEFA5A3E0 1075 aa11.65□□□□□ -0.54
MATR3-216ENST00000511249 PLEKHG5O94827 1062 aa11.64□□□□□ -0.55
MATR3-216ENST00000511249 MAP3K13O43283 966 aa11.63□□□□□ -0.55
MATR3-216ENST00000511249 TRPC6Q9Y210 931 aa11.63□□□□□ -0.55
MATR3-216ENST00000511249 SLC24A1O60721 1099 aa11.62□□□□□ -0.55
MATR3-216ENST00000511249 RASEFQ8IZ41 740 aa11.58□□□□□ -0.56
MATR3-216ENST00000511249 MIER1Q8N108 512 aa11.57□□□□□ -0.56
MATR3-216ENST00000511249 TTLL13PA6NNM8 815 aa11.56□□□□□ -0.56
MATR3-216ENST00000511249 SEC24BO95487 1268 aa11.56□□□□□ -0.56
MATR3-216ENST00000511249 SGIP1Q9BQI5 828 aa11.54□□□□□ -0.56
MATR3-216ENST00000511249 COLQQ9Y215 455 aaPredicted RBP11.54□□□□□ -0.56
MATR3-216ENST00000511249 IER5LQ5T953 404 aa11.53□□□□□ -0.56
MATR3-216ENST00000511249 TRIM35Q9UPQ4 493 aa11.48□□□□□ -0.57
MATR3-216ENST00000511249 PCDHB13Q9Y5F0 798 aa11.47□□□□□ -0.57
MATR3-216ENST00000511249 CDAN1Q8IWY9 1227 aa11.45□□□□□ -0.58
MATR3-216ENST00000511249 PLCD3Q8N3E9 789 aa11.44□□□□□ -0.58
MATR3-216ENST00000511249 RTN4Q9NQC3 1192 aaKnown RBP11.44□□□□□ -0.58
MATR3-216ENST00000511249 ZBTB47Q9UFB7 747 aaPredicted RBP11.43□□□□□ -0.58
MATR3-216ENST00000511249 SLAIN1Q8ND83 568 aa11.4□□□□□ -0.58
MATR3-216ENST00000511249 NUBP1P53384 320 aa11.39□□□□□ -0.59
MATR3-216ENST00000511249 IFNL1Q8IU54 200 aa11.39□□□□□ -0.59
MATR3-216ENST00000511249 AMER1Q5JTC6 1135 aaPredicted RBP11.38□□□□□ -0.59
MATR3-216ENST00000511249 ST18O60284 1047 aa11.37□□□□□ -0.59
MATR3-216ENST00000511249 TMEM106CQ9BVX2 250 aa11.36□□□□□ -0.59
MATR3-216ENST00000511249 PLCG2P16885 1265 aa11.35□□□□□ -0.59
MATR3-216ENST00000511249 FAM212AQ96EL1 285 aa11.34□□□□□ -0.59
MATR3-216ENST00000511249 IRX5P78411 483 aaPredicted RBP11.31□□□□□ -0.6
MATR3-216ENST00000511249 TMEM121BQ9BXQ6 578 aaPredicted RBP11.27□□□□□ -0.61
MATR3-216ENST00000511249 OCEL1Q9H607 264 aa11.25□□□□□ -0.61
MATR3-216ENST00000511249 SNPHO15079 494 aa11.24□□□□□ -0.61
MATR3-216ENST00000511249 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.2□□□□□ -0.62
MATR3-216ENST00000511249 SPNS2Q8IVW8 549 aa11.19□□□□□ -0.62
MATR3-216ENST00000511249 MMRN1Q13201 1228 aa11.18□□□□□ -0.62
MATR3-216ENST00000511249 DCAF8Q5TAQ9 597 aa11.17□□□□□ -0.62
MATR3-216ENST00000511249 PYGBP11216 843 aa11.16□□□□□ -0.62
MATR3-216ENST00000511249 PCDHB8Q9UN66 801 aa11.13□□□□□ -0.63
MATR3-216ENST00000511249 MARVELD3Q96A59 401 aa11.12□□□□□ -0.63
MATR3-216ENST00000511249 FKBP8Q14318 412 aa11.07□□□□□ -0.64
MATR3-216ENST00000511249 C3orf67Q6ZVT6 689 aa11.07□□□□□ -0.64
MATR3-216ENST00000511249 PDCD7Q8N8D1 485 aaKnown RBP11.07□□□□□ -0.64
MATR3-216ENST00000511249 L3MBTL3Q96JM7 780 aaPredicted RBP11.06□□□□□ -0.64
MATR3-216ENST00000511249 GOLGA2Q08379 1002 aa11.04□□□□□ -0.64
MATR3-216ENST00000511249 ZNF467Q7Z7K2 595 aaPredicted RBP11.04□□□□□ -0.64
MATR3-216ENST00000511249 EMP3P54852 163 aa11.03□□□□□ -0.64
MATR3-216ENST00000511249 MKRN3Q13064 507 aaKnown RBP11.03□□□□□ -0.64
MATR3-216ENST00000511249 FBXO3Q9UK99 471 aa11.02□□□□□ -0.65
MATR3-216ENST00000511249 GSE1Q14687 1217 aa11.01□□□□□ -0.65
MATR3-216ENST00000511249 CHRM1P11229 460 aaPredicted RBP10.97□□□□□ -0.65
MATR3-216ENST00000511249 HS3ST6Q96QI5 342 aa10.97□□□□□ -0.65
MATR3-216ENST00000511249 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.97□□□□□ -0.652e-10■■■□□ 15.6
MATR3-216ENST00000511249 KRTAP3-3Q9BYR6 98 aa10.95□□□□□ -0.66
MATR3-216ENST00000511249 KRTAP3-2Q9BYR7 98 aa10.95□□□□□ -0.66
MATR3-216ENST00000511249 POTEB3A0JP26 581 aa10.94□□□□□ -0.66
MATR3-216ENST00000511249 FAM205CA6NFA0 338 aa10.94□□□□□ -0.66
MATR3-216ENST00000511249 POTEBQ6S5H4 581 aa10.94□□□□□ -0.66
MATR3-216ENST00000511249 PSEN1P49768 467 aa10.92□□□□□ -0.66
MATR3-216ENST00000511249 ILDR1Q86SU0 546 aaPredicted RBP10.92□□□□□ -0.66
MATR3-216ENST00000511249 KLHL34Q8N239 644 aa10.92□□□□□ -0.66
MATR3-216ENST00000511249 VASPP50552 380 aaPredicted RBP10.87□□□□□ -0.67
MATR3-216ENST00000511249 PDAP1Q13442 181 aaKnown RBP10.85□□□□□ -0.67
MATR3-216ENST00000511249 G3V3G9 751 aa10.84□□□□□ -0.67
MATR3-216ENST00000511249 HOXB3P14651 431 aaPredicted RBP10.83□□□□□ -0.68
MATR3-216ENST00000511249 DPY19L2Q6NUT2 758 aa10.83□□□□□ -0.68
MATR3-216ENST00000511249 BOLA1Q9Y3E2 137 aa10.83□□□□□ -0.68
MATR3-216ENST00000511249 HOXB1P14653 301 aaPredicted RBP10.8□□□□□ -0.68
MATR3-216ENST00000511249 CABP2Q9NPB3 220 aa10.79□□□□□ -0.68
MATR3-216ENST00000511249 DOK7Q18PE1 504 aa10.78□□□□□ -0.68
MATR3-216ENST00000511249 ZNF710Q8N1W2 664 aa10.78□□□□□ -0.68
MATR3-216ENST00000511249 ERBB3P21860 1342 aa10.75□□□□□ -0.69
MATR3-216ENST00000511249 RIMBP2O15034 1052 aa10.71□□□□□ -0.69
MATR3-216ENST00000511249 RNF166Q96A37 237 aaPredicted RBP10.7□□□□□ -0.7
MATR3-216ENST00000511249 SPOCK2Q92563 424 aa10.69□□□□□ -0.7
MATR3-216ENST00000511249 CIZ1Q9ULV3 898 aaPredicted RBP10.69□□□□□ -0.7
MATR3-216ENST00000511249 VARS2Q5ST30 1063 aaKnown RBP10.65□□□□□ -0.7
MATR3-216ENST00000511249 ZSWIM6Q9HCJ5 1215 aa10.65□□□□□ -0.7
MATR3-216ENST00000511249 MYT1LQ9UL68 1186 aa10.64□□□□□ -0.71
MATR3-216ENST00000511249 ZNF687Q8N1G0 1237 aa10.62□□□□□ -0.71
MATR3-216ENST00000511249 EFCAB3Q8N7B9 438 aa10.62□□□□□ -0.71
MATR3-216ENST00000511249 IFNLR1Q8IU57 520 aaPredicted RBP10.61□□□□□ -0.71
MATR3-216ENST00000511249 PTGER2P43116 358 aa10.59□□□□□ -0.71
MATR3-216ENST00000511249 MICALL2Q8IY33 904 aa10.59□□□□□ -0.71
MATR3-216ENST00000511249 TRIM41Q8WV44 630 aa10.58□□□□□ -0.72
MATR3-216ENST00000511249 TMEM92Q6UXU6 159 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms