RNA–Protein interactions for RNA: ENST00000511105.1

PTPN13-208, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 3

Gene PTPN13, Length 645 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-208ENST00000511105 PAK3O75914 559 aaPredicted RBP10.8□□□□□ -0.68
PTPN13-208ENST00000511105 CLCN6P51797 869 aa10.8□□□□□ -0.68
PTPN13-208ENST00000511105 RASEFQ8IZ41 740 aa10.79□□□□□ -0.68
PTPN13-208ENST00000511105 FBXO3Q9UK99 471 aa10.74□□□□□ -0.69
PTPN13-208ENST00000511105 DCBLD2Q96PD2 775 aa10.73□□□□□ -0.69
PTPN13-208ENST00000511105 VASPP50552 380 aaPredicted RBP10.7□□□□□ -0.7
PTPN13-208ENST00000511105 NUBP1P53384 320 aa10.7□□□□□ -0.7
PTPN13-208ENST00000511105 CCDC61Q9Y6R9 512 aa10.7□□□□□ -0.7
PTPN13-208ENST00000511105 KLHL34Q8N239 644 aa10.69□□□□□ -0.7
PTPN13-208ENST00000511105 MS4A3Q96HJ5 214 aa10.69□□□□□ -0.7
PTPN13-208ENST00000511105 OTUD5Q96G74 571 aa10.66□□□□□ -0.7
PTPN13-208ENST00000511105 MAP3K13O43283 966 aa10.64□□□□□ -0.71
PTPN13-208ENST00000511105 KIF12Q96FN5 646 aa10.64□□□□□ -0.71
PTPN13-208ENST00000511105 TRPC6Q9Y210 931 aa10.64□□□□□ -0.71
PTPN13-208ENST00000511105 DCAF8Q5TAQ9 597 aa10.63□□□□□ -0.71
PTPN13-208ENST00000511105 ZBTB47Q9UFB7 747 aaPredicted RBP10.63□□□□□ -0.71
PTPN13-208ENST00000511105 PELP1Q8IZL8 1130 aaKnown RBP10.62□□□□□ -0.71
PTPN13-208ENST00000511105 POTEMA6NI47 508 aa10.61□□□□□ -0.71
PTPN13-208ENST00000511105 IFNLR1Q8IU57 520 aaPredicted RBP10.6□□□□□ -0.71
PTPN13-208ENST00000511105 POTEB2H3BUK9 544 aa10.58□□□□□ -0.72
PTPN13-208ENST00000511105 PYGBP11216 843 aa10.56□□□□□ -0.72
PTPN13-208ENST00000511105 POTEGQ6S5H5 508 aa10.56□□□□□ -0.72
PTPN13-208ENST00000511105 FAM212AQ96EL1 285 aa10.56□□□□□ -0.72
PTPN13-208ENST00000511105 ATMINO43313 823 aaPredicted RBP10.53□□□□□ -0.72
PTPN13-208ENST00000511105 PCDHB13Q9Y5F0 798 aa10.52□□□□□ -0.73
PTPN13-208ENST00000511105 ATN1P54259 1190 aaPredicted RBP10.51□□□□□ -0.73
PTPN13-208ENST00000511105 IFNL1Q8IU54 200 aa10.5□□□□□ -0.73
PTPN13-208ENST00000511105 BMP2KQ9NSY1 1161 aaPredicted RBP10.49□□□□□ -0.73
PTPN13-208ENST00000511105 ASTLQ6HA08 431 aaPredicted RBP10.47□□□□□ -0.73
PTPN13-208ENST00000511105 PCDH10Q9P2E7 1040 aa10.47□□□□□ -0.73
PTPN13-208ENST00000511105 CIZ1Q9ULV3 898 aaPredicted RBP10.47□□□□□ -0.73
PTPN13-208ENST00000511105 PCDHB8Q9UN66 801 aa10.47□□□□□ -0.73
PTPN13-208ENST00000511105 SPOCK2Q92563 424 aa10.45□□□□□ -0.74
PTPN13-208ENST00000511105 TTLL13PA6NNM8 815 aa10.42□□□□□ -0.74
PTPN13-208ENST00000511105 METRNQ9UJH8 293 aa10.42□□□□□ -0.74
PTPN13-208ENST00000511105 GSE1Q14687 1217 aa10.4□□□□□ -0.74
PTPN13-208ENST00000511105 TIE1P35590 1138 aa10.38□□□□□ -0.75
PTPN13-208ENST00000511105 TMEM106CQ9BVX2 250 aa10.38□□□□□ -0.75
PTPN13-208ENST00000511105 SGIP1Q9BQI5 828 aa10.37□□□□□ -0.75
PTPN13-208ENST00000511105 TRIM35Q9UPQ4 493 aa10.37□□□□□ -0.75
PTPN13-208ENST00000511105 POTEFA5A3E0 1075 aa10.36□□□□□ -0.75
PTPN13-208ENST00000511105 POTEJP0CG39 1038 aa10.36□□□□□ -0.75
PTPN13-208ENST00000511105 SLC39A7Q92504 469 aa10.36□□□□□ -0.75
PTPN13-208ENST00000511105 C7P10643 843 aa10.34□□□□□ -0.75
PTPN13-208ENST00000511105 COLQQ9Y215 455 aaPredicted RBP10.34□□□□□ -0.75
PTPN13-208ENST00000511105 LCE2DQ5TA82 110 aaPredicted RBP10.31□□□□□ -0.76
PTPN13-208ENST00000511105 SEC24BO95487 1268 aa10.28□□□□□ -0.76
PTPN13-208ENST00000511105 CHRM1P11229 460 aaPredicted RBP10.27□□□□□ -0.77
PTPN13-208ENST00000511105 MAMSTRQ6ZN01 415 aa10.27□□□□□ -0.77
PTPN13-208ENST00000511105 PSEN1P49768 467 aa10.25□□□□□ -0.77
PTPN13-208ENST00000511105 ZNF467Q7Z7K2 595 aaPredicted RBP10.24□□□□□ -0.77
PTPN13-208ENST00000511105 FAM163AQ96GL9 167 aaPredicted RBP10.24□□□□□ -0.77
PTPN13-208ENST00000511105 SCUBE2Q9NQ36 999 aa10.18□□□□□ -0.78
PTPN13-208ENST00000511105 PLCG2P16885 1265 aa10.17□□□□□ -0.78
PTPN13-208ENST00000511105 IRX5P78411 483 aaPredicted RBP10.17□□□□□ -0.78
PTPN13-208ENST00000511105 PDAP1Q13442 181 aaKnown RBP10.16□□□□□ -0.78
PTPN13-208ENST00000511105 IER5LQ5T953 404 aa10.16□□□□□ -0.78
PTPN13-208ENST00000511105 RNF25Q96BH1 459 aaPredicted RBP10.16□□□□□ -0.78
PTPN13-208ENST00000511105 CABP2Q9NPB3 220 aa10.16□□□□□ -0.78
PTPN13-208ENST00000511105 GOLGA2Q08379 1002 aa10.14□□□□□ -0.79
PTPN13-208ENST00000511105 MKRN3Q13064 507 aaKnown RBP10.13□□□□□ -0.79
PTPN13-208ENST00000511105 OCEL1Q9H607 264 aa10.12□□□□□ -0.79
PTPN13-208ENST00000511105 DPY19L2Q6NUT2 758 aa10.11□□□□□ -0.79
PTPN13-208ENST00000511105 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.11□□□□□ -0.79
PTPN13-208ENST00000511105 RIOK3O14730 519 aaKnown RBP10.08□□□□□ -0.8
PTPN13-208ENST00000511105 ECM2O94769 699 aaPredicted RBP10.08□□□□□ -0.8
PTPN13-208ENST00000511105 PKD2Q13563 968 aa10.08□□□□□ -0.8
PTPN13-208ENST00000511105 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.07□□□□□ -0.8
PTPN13-208ENST00000511105 CDAN1Q8IWY9 1227 aa10.07□□□□□ -0.8
PTPN13-208ENST00000511105 PDCD7Q8N8D1 485 aaKnown RBP10.07□□□□□ -0.8
PTPN13-208ENST00000511105 TRIM41Q8WV44 630 aa10.07□□□□□ -0.8
PTPN13-208ENST00000511105 ZFP91Q96JP5 570 aaPredicted RBP10.07□□□□□ -0.8
PTPN13-208ENST00000511105 EFCAB3Q8N7B9 438 aa10.06□□□□□ -0.8
PTPN13-208ENST00000511105 RGL2O15211 777 aa10.04□□□□□ -0.8
PTPN13-208ENST00000511105 SLAIN1Q8ND83 568 aa10.04□□□□□ -0.8
PTPN13-208ENST00000511105 PLCB2Q00722 1185 aa10.02□□□□□ -0.81
PTPN13-208ENST00000511105 VGFO15240 615 aaPredicted RBP9.99□□□□□ -0.81
PTPN13-208ENST00000511105 BCL11BQ9C0K0 894 aaPredicted RBP9.97□□□□□ -0.81
PTPN13-208ENST00000511105 STK24Q9Y6E0 443 aa9.97□□□□□ -0.81
PTPN13-208ENST00000511105 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.96□□□□□ -0.82
PTPN13-208ENST00000511105 PHF8Q9UPP1 1060 aa9.96□□□□□ -0.82
PTPN13-208ENST00000511105 ILDR1Q86SU0 546 aaPredicted RBP9.94□□□□□ -0.82
PTPN13-208ENST00000511105 STK25O00506 426 aa9.93□□□□□ -0.82
PTPN13-208ENST00000511105 L3MBTL3Q96JM7 780 aaPredicted RBP9.93□□□□□ -0.82
PTPN13-208ENST00000511105 ST18O60284 1047 aa9.91□□□□□ -0.82
PTPN13-208ENST00000511105 C3orf67Q6ZVT6 689 aa9.91□□□□□ -0.82
PTPN13-208ENST00000511105 MS4A4AQ96JQ5 239 aa9.91□□□□□ -0.82
PTPN13-208ENST00000511105 BOLA1Q9Y3E2 137 aa9.91□□□□□ -0.82
PTPN13-208ENST00000511105 MMRN1Q13201 1228 aa9.88□□□□□ -0.83
PTPN13-208ENST00000511105 G3V3G9 751 aa9.87□□□□□ -0.83
PTPN13-208ENST00000511105 SOX12O15370 315 aa9.86□□□□□ -0.83
PTPN13-208ENST00000511105 SPNS2Q8IVW8 549 aa9.85□□□□□ -0.83
PTPN13-208ENST00000511105 MFRPQ9BY79 579 aa9.84□□□□□ -0.83
PTPN13-208ENST00000511105 ABCC9O60706 1549 aa9.82□□□□□ -0.84
PTPN13-208ENST00000511105 FBXO22Q8NEZ5 403 aa9.82□□□□□ -0.84
PTPN13-208ENST00000511105 TAOK2Q9UL54 1235 aa9.82□□□□□ -0.84
PTPN13-208ENST00000511105 TMEM92Q6UXU6 159 aa9.81□□□□□ -0.84
PTPN13-208ENST00000511105 MICALL2Q8IY33 904 aa9.81□□□□□ -0.84
PTPN13-208ENST00000511105 MARVELD3Q96A59 401 aa9.81□□□□□ -0.84
PTPN13-208ENST00000511105 NLRP6P59044 892 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms