RNA–Protein interactions for RNA: ENST00000510948.1

SMAD1-208, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-208ENST00000510948 REM2Q8IYK8 340 aaPredicted RBP9.5□□□□□ -0.89
SMAD1-208ENST00000510948 CREBZFQ9NS37 354 aa9.5□□□□□ -0.89
SMAD1-208ENST00000510948 HS6ST3Q8IZP7 471 aa9.49□□□□□ -0.89
SMAD1-208ENST00000510948 TSHZ2Q9NRE2 1034 aa9.49□□□□□ -0.89
SMAD1-208ENST00000510948 RNF25Q96BH1 459 aaPredicted RBP9.48□□□□□ -0.89
SMAD1-208ENST00000510948 MNX1P50219 401 aaPredicted RBP9.47□□□□□ -0.89
SMAD1-208ENST00000510948 TAOK2Q9UL54 1235 aa9.47□□□□□ -0.89
SMAD1-208ENST00000510948 FAM212AQ96EL1 285 aa9.46□□□□□ -0.9
SMAD1-208ENST00000510948 DNAJC5Q9H3Z4 198 aa9.46□□□□□ -0.9
SMAD1-208ENST00000510948 RIOK3O14730 519 aaKnown RBP9.44□□□□□ -0.9
SMAD1-208ENST00000510948 CHRM1P11229 460 aaPredicted RBP9.42□□□□□ -0.9
SMAD1-208ENST00000510948 RASEFQ8IZ41 740 aa9.39□□□□□ -0.91
SMAD1-208ENST00000510948 VGFO15240 615 aaPredicted RBP9.38□□□□□ -0.91
SMAD1-208ENST00000510948 POTEHQ6S545 545 aa9.38□□□□□ -0.91
SMAD1-208ENST00000510948 PITPNM1O00562 1244 aa9.37□□□□□ -0.91
SMAD1-208ENST00000510948 NKX1-1Q15270 411 aaPredicted RBP9.36□□□□□ -0.91
SMAD1-208ENST00000510948 STK25O00506 426 aa9.35□□□□□ -0.91
SMAD1-208ENST00000510948 PRKCSHP14314 528 aaPredicted RBP9.35□□□□□ -0.91
SMAD1-208ENST00000510948 SGIP1Q9BQI5 828 aa9.35□□□□□ -0.91
SMAD1-208ENST00000510948 GTPBP6O43824 516 aaPredicted RBP9.32□□□□□ -0.92
SMAD1-208ENST00000510948 NISCHQ9Y2I1 1504 aa9.31□□□□□ -0.92
SMAD1-208ENST00000510948 PYGBP11216 843 aa9.31□□□□□ -0.92
SMAD1-208ENST00000510948 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.28□□□□□ -0.92
SMAD1-208ENST00000510948 ZFP91Q96JP5 570 aaPredicted RBP9.28□□□□□ -0.92
SMAD1-208ENST00000510948 BCL11BQ9C0K0 894 aaPredicted RBP9.28□□□□□ -0.92
SMAD1-208ENST00000510948 STK24Q9Y6E0 443 aa9.28□□□□□ -0.92
SMAD1-208ENST00000510948 TPRNQ4KMQ1 711 aa9.26□□□□□ -0.93
SMAD1-208ENST00000510948 RYDENQ9NUL5 291 aaKnown RBP9.25□□□□□ -0.93
SMAD1-208ENST00000510948 CHADLQ6NUI6 762 aa9.24□□□□□ -0.93
SMAD1-208ENST00000510948 NBR1Q14596 966 aa9.22□□□□□ -0.93
SMAD1-208ENST00000510948 TSPYL2Q9H2G4 693 aaPredicted RBP9.22□□□□□ -0.93
SMAD1-208ENST00000510948 FARP1Q9Y4F1 1045 aaPredicted RBP9.22□□□□□ -0.93
SMAD1-208ENST00000510948 ZNF467Q7Z7K2 595 aaPredicted RBP9.2□□□□□ -0.94
SMAD1-208ENST00000510948 PDAP1Q13442 181 aaKnown RBP9.16□□□□□ -0.94
SMAD1-208ENST00000510948 CHRDL2Q6WN34 429 aa9.16□□□□□ -0.94
SMAD1-208ENST00000510948 PRKAR2AP13861 404 aaKnown RBP9.15□□□□□ -0.94
SMAD1-208ENST00000510948 CCDC61Q9Y6R9 512 aa9.13□□□□□ -0.95
SMAD1-208ENST00000510948 PCDHB8Q9UN66 801 aa9.12□□□□□ -0.95
SMAD1-208ENST00000510948 PCDHB13Q9Y5F0 798 aa9.12□□□□□ -0.95
SMAD1-208ENST00000510948 FXR2P51116 673 aaKnown RBP eCLIP9.11□□□□□ -0.95
SMAD1-208ENST00000510948 ZNF579Q8NAF0 562 aaKnown RBP9.11□□□□□ -0.95
SMAD1-208ENST00000510948 PSEN1P49768 467 aa9.09□□□□□ -0.95
SMAD1-208ENST00000510948 PAK3O75914 559 aaPredicted RBP9.07□□□□□ -0.96
SMAD1-208ENST00000510948 MFRPQ9BY79 579 aa9.04□□□□□ -0.96
SMAD1-208ENST00000510948 WDR70Q9NW82 654 aa9.04□□□□□ -0.96
SMAD1-208ENST00000510948 CADPS2Q86UW7 1296 aa9.03□□□□□ -0.96
SMAD1-208ENST00000510948 IFNL1Q8IU54 200 aa9.03□□□□□ -0.96
SMAD1-208ENST00000510948 P3H3Q8IVL6 736 aa9.03□□□□□ -0.96
SMAD1-208ENST00000510948 KIF12Q96FN5 646 aa9.02□□□□□ -0.97
SMAD1-208ENST00000510948 MAP3K13O43283 966 aa9.01□□□□□ -0.97
SMAD1-208ENST00000510948 PIP4P2Q8N4L2 257 aa9.01□□□□□ -0.97
SMAD1-208ENST00000510948 SOX12O15370 315 aa8.99□□□□□ -0.97
SMAD1-208ENST00000510948 NLRP6P59044 892 aa8.98□□□□□ -0.97
SMAD1-208ENST00000510948 EFCAB3Q8N7B9 438 aa8.98□□□□□ -0.97
SMAD1-208ENST00000510948 CABP2Q9NPB3 220 aa8.97□□□□□ -0.97
SMAD1-208ENST00000510948 FBXO22Q8NEZ5 403 aa8.96□□□□□ -0.98
SMAD1-208ENST00000510948 KCNV2Q8TDN2 545 aa8.96□□□□□ -0.98
SMAD1-208ENST00000510948 PPP1R37O75864 691 aa8.95□□□□□ -0.98
SMAD1-208ENST00000510948 ZRANB1Q9UGI0 708 aa8.94□□□□□ -0.98
SMAD1-208ENST00000510948 PHF8Q9UPP1 1060 aa8.94□□□□□ -0.98
SMAD1-208ENST00000510948 CD44P16070 742 aaKnown RBP8.9□□□□□ -0.98
SMAD1-208ENST00000510948 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.88□□□□□ -0.99
SMAD1-208ENST00000510948 ARHGEF1Q92888 912 aaKnown RBP8.88□□□□□ -0.99
SMAD1-208ENST00000510948 E2F4Q16254 413 aa8.87□□□□□ -0.99
SMAD1-208ENST00000510948 PHF12Q96QT6 1004 aa8.87□□□□□ -0.99
SMAD1-208ENST00000510948 LMOD2Q6P5Q4 547 aa8.85□□□□□ -0.99
SMAD1-208ENST00000510948 TULP1O00294 542 aaPredicted RBP8.84□□□□□ -0.99
SMAD1-208ENST00000510948 PDE4AP27815 886 aa8.84□□□□□ -0.99
SMAD1-208ENST00000510948 GOLGA2Q08379 1002 aa8.84□□□□□ -0.99
SMAD1-208ENST00000510948 TMEM106CQ9BVX2 250 aa8.84□□□□□ -0.99
SMAD1-208ENST00000510948 MS4A4AQ96JQ5 239 aa8.83□□□□□ -1
SMAD1-208ENST00000510948 NCKAP5LQ9HCH0 1330 aa8.81□□□□□ -1
SMAD1-208ENST00000510948 LARP6Q9BRS8 491 aaKnown RBP8.81□□□□□ -1
SMAD1-208ENST00000510948 MKRN3Q13064 507 aaKnown RBP8.8□□□□□ -1
SMAD1-208ENST00000510948 SP7Q8TDD2 431 aaPredicted RBP8.8□□□□□ -1
SMAD1-208ENST00000510948 TRPC6Q9Y210 931 aa8.79□□□□□ -1
SMAD1-208ENST00000510948 C19orf67A6NJJ6 358 aa8.78□□□□□ -1
SMAD1-208ENST00000510948 HAX1O00165 279 aa8.78□□□□□ -1
SMAD1-208ENST00000510948 MFSD10Q14728 455 aa8.78□□□□□ -1
SMAD1-208ENST00000510948 MS4A3Q96HJ5 214 aa8.78□□□□□ -1
SMAD1-208ENST00000510948 CRISPLD2Q9H0B8 497 aa8.78□□□□□ -1
SMAD1-208ENST00000510948 SEMA3EO15041 775 aa8.77□□□□□ -1.01
SMAD1-208ENST00000510948 TESPA1A2RU30 521 aaPredicted RBP8.76□□□□□ -1.01
SMAD1-208ENST00000510948 TIE1P35590 1138 aa8.75□□□□□ -1.01
SMAD1-208ENST00000510948 DDX27Q96GQ7 796 aaKnown RBP8.75□□□□□ -1.01
SMAD1-208ENST00000510948 ARIH1Q9Y4X5 557 aaPredicted RBP8.74□□□□□ -1.01
SMAD1-208ENST00000510948 ZC3H15Q8WU90 426 aaKnown RBP8.73□□□□□ -1.01
SMAD1-208ENST00000510948 TTLL13PA6NNM8 815 aa8.72□□□□□ -1.01
SMAD1-208ENST00000510948 CAMK2BQ13554 666 aa8.72□□□□□ -1.01
SMAD1-208ENST00000510948 TMEM132AQ24JP5 1023 aa8.72□□□□□ -1.01
SMAD1-208ENST00000510948 SMYD5Q6GMV2 418 aa8.72□□□□□ -1.01
SMAD1-208ENST00000510948 ILDR1Q86SU0 546 aaPredicted RBP8.72□□□□□ -1.01
SMAD1-208ENST00000510948 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.72□□□□□ -1.01
SMAD1-208ENST00000510948 GTF3C3Q9Y5Q9 886 aa8.7□□□□□ -1.02
SMAD1-208ENST00000510948 BMP2KQ9NSY1 1161 aaPredicted RBP8.69□□□□□ -1.02
SMAD1-208ENST00000510948 GPHNQ9NQX3 736 aaPredicted RBP8.68□□□□□ -1.02
SMAD1-208ENST00000510948 TRIM35Q9UPQ4 493 aa8.66□□□□□ -1.02
SMAD1-208ENST00000510948 CLCN6P51797 869 aa8.65□□□□□ -1.02
SMAD1-208ENST00000510948 PPP1R15BQ5SWA1 713 aa8.65□□□□□ -1.02
SMAD1-208ENST00000510948 GALR2O43603 387 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms