RNA–Protein interactions for RNA: ENST00000510477.5

CDH10-204, Transcript of cadherin 10, humanhuman

TSL 1 (best)

Gene CDH10, Length 2,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH10-204ENST00000510477 DHX37Q8IY37 1157 aaKnown RBP8.95□□□□□ -0.98
CDH10-204ENST00000510477 ABCC9O60706 1549 aa8.94□□□□□ -0.98
CDH10-204ENST00000510477 KCTD17Q8N5Z5 321 aa8.92□□□□□ -0.98
CDH10-204ENST00000510477 APBB1O00213 710 aa8.91□□□□□ -0.98
CDH10-204ENST00000510477 RAD21O60216 631 aa8.91□□□□□ -0.98
CDH10-204ENST00000510477 NISCHQ9Y2I1 1504 aa8.91□□□□□ -0.98
CDH10-204ENST00000510477 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.9□□□□□ -0.98
CDH10-204ENST00000510477 HSP90B1P14625 803 aaKnown RBP8.9□□□□□ -0.99
CDH10-204ENST00000510477 SLC24A3Q9HC58 644 aa8.89□□□□□ -0.99
CDH10-204ENST00000510477 FOXD4L5Q5VV16 416 aaPredicted RBP8.87□□□□□ -0.99
CDH10-204ENST00000510477 FOXD4L4Q8WXT5 416 aaPredicted RBP8.87□□□□□ -0.99
CDH10-204ENST00000510477 MTMR7Q9Y216 660 aa8.87□□□□□ -0.99
CDH10-204ENST00000510477 SCAF1Q9H7N4 1312 aaKnown RBP8.86□□□□□ -0.99
CDH10-204ENST00000510477 RNF216Q9NWF9 866 aaPredicted RBP8.86□□□□□ -0.99
CDH10-204ENST00000510477 RBM25P49756 843 aaKnown RBP8.84□□□□□ -0.99
CDH10-204ENST00000510477 PROM2Q8N271 834 aa8.83□□□□□ -1
CDH10-204ENST00000510477 RGS22Q8NE09 1264 aa8.81□□□□□ -1
CDH10-204ENST00000510477 SPOCK2Q92563 424 aa8.81□□□□□ -1
CDH10-204ENST00000510477 NKX1-1Q15270 411 aaPredicted RBP8.8□□□□□ -1
CDH10-204ENST00000510477 HMGB1P09429 215 aaKnown RBP8.79□□□□□ -1
CDH10-204ENST00000510477 AEBP1Q8IUX7 1158 aa8.79□□□□□ -1
CDH10-204ENST00000510477 ZC3H15Q8WU90 426 aaKnown RBP8.78□□□□□ -1
CDH10-204ENST00000510477 PUS7Q96PZ0 661 aaKnown RBP8.78□□□□□ -1
CDH10-204ENST00000510477 GPBP1L1Q9HC44 474 aaPredicted RBP8.77□□□□□ -1.01
CDH10-204ENST00000510477 IL27Q8NEV9 243 aa8.77□□□□□ -1.01
CDH10-204ENST00000510477 CCDC82Q8N4S0 544 aa8.76□□□□□ -1.01
CDH10-204ENST00000510477 POLR3GLQ9BT43 218 aa8.75□□□□□ -1.01
CDH10-204ENST00000510477 FAM9AQ8IZU1 332 aaPredicted RBP8.74□□□□□ -1.01
CDH10-204ENST00000510477 MKRN3Q13064 507 aaKnown RBP8.74□□□□□ -1.01
CDH10-204ENST00000510477 KCNV2Q8TDN2 545 aa8.73□□□□□ -1.01
CDH10-204ENST00000510477 TRIM41Q8WV44 630 aa8.72□□□□□ -1.01
CDH10-204ENST00000510477 UBE2Q2Q8WVN8 375 aa8.72□□□□□ -1.01
CDH10-204ENST00000510477 GTPBP6O43824 516 aaPredicted RBP8.71□□□□□ -1.01
CDH10-204ENST00000510477 BRD2P25440 801 aaKnown RBP8.71□□□□□ -1.02
CDH10-204ENST00000510477 USP35Q9P2H5 1018 aa8.7□□□□□ -1.02
CDH10-204ENST00000510477 HS6ST3Q8IZP7 471 aa8.69□□□□□ -1.02
CDH10-204ENST00000510477 MKRN4PQ13434 485 aaPredicted RBP8.67□□□□□ -1.02
CDH10-204ENST00000510477 MFAP1P55081 439 aaKnown RBP8.67□□□□□ -1.02
CDH10-204ENST00000510477 TMCO4Q5TGY1 634 aa8.66□□□□□ -1.02
CDH10-204ENST00000510477 CIZ1Q9ULV3 898 aaPredicted RBP8.66□□□□□ -1.02
CDH10-204ENST00000510477 GZF1Q9H116 711 aaPredicted RBP8.64□□□□□ -1.03
CDH10-204ENST00000510477 RNF25Q96BH1 459 aaPredicted RBP8.63□□□□□ -1.03
CDH10-204ENST00000510477 WDR70Q9NW82 654 aa8.63□□□□□ -1.03
CDH10-204ENST00000510477 P3H3Q8IVL6 736 aa8.62□□□□□ -1.03
CDH10-204ENST00000510477 ZNF692Q9BU19 519 aaPredicted RBP8.6□□□□□ -1.03
CDH10-204ENST00000510477 FAM177A1Q8N128 213 aaPredicted RBP8.59□□□□□ -1.03
CDH10-204ENST00000510477 CLUAP1Q96AJ1 413 aa8.59□□□□□ -1.03
CDH10-204ENST00000510477 PDE4CQ08493 712 aa8.59□□□□□ -1.03
CDH10-204ENST00000510477 CUX2O14529 1486 aa8.58□□□□□ -1.04
CDH10-204ENST00000510477 CCDC180Q9P1Z9 1646 aa8.57□□□□□ -1.04
CDH10-204ENST00000510477 E9PSI1 815 aa8.56□□□□□ -1.04
CDH10-204ENST00000510477 TRAIPQ9BWF2 469 aa8.55□□□□□ -1.04
CDH10-204ENST00000510477 SEMA3EO15041 775 aa8.54□□□□□ -1.04
CDH10-204ENST00000510477 ZNF219Q9P2Y4 722 aaPredicted RBP8.54□□□□□ -1.04
CDH10-204ENST00000510477 ZMYND10O75800 440 aa8.53□□□□□ -1.04
CDH10-204ENST00000510477 KDM4CQ9H3R0 1056 aa8.53□□□□□ -1.04
CDH10-204ENST00000510477 CWC22Q9HCG8 908 aaKnown RBP8.52□□□□□ -1.05
CDH10-204ENST00000510477 PPM1GO15355 546 aaPredicted RBP8.51□□□□□ -1.05
CDH10-204ENST00000510477 HOXD11P31277 338 aaPredicted RBP8.51□□□□□ -1.05
CDH10-204ENST00000510477 IRF5Q13568 498 aa8.51□□□□□ -1.05
CDH10-204ENST00000510477 CADPS2Q86UW7 1296 aa8.51□□□□□ -1.05
CDH10-204ENST00000510477 RETREG2Q8NC44 543 aa8.51□□□□□ -1.05
CDH10-204ENST00000510477 PLCD3Q8N3E9 789 aa8.5□□□□□ -1.05
CDH10-204ENST00000510477 FBXW7Q969H0 707 aa8.49□□□□□ -1.05
CDH10-204ENST00000510477 IRX6P78412 446 aaPredicted RBP8.48□□□□□ -1.05
CDH10-204ENST00000510477 TAF7LQ5H9L4 462 aa8.48□□□□□ -1.05
CDH10-204ENST00000510477 ZNF777Q9ULD5 760 aaPredicted RBP8.48□□□□□ -1.05
CDH10-204ENST00000510477 RB1CC1Q8TDY2 1594 aa8.48□□□□□ -1.05
CDH10-204ENST00000510477 POLA2Q14181 598 aa8.48□□□□□ -1.05
CDH10-204ENST00000510477 TRAK2O60296 914 aa8.47□□□□□ -1.05
CDH10-204ENST00000510477 BRPF3Q9ULD4 1205 aa8.46□□□□□ -1.06
CDH10-204ENST00000510477 STK25O00506 426 aa8.45□□□□□ -1.06
CDH10-204ENST00000510477 FAM117AQ9C073 453 aa8.45□□□□□ -1.06
CDH10-204ENST00000510477 ZNF316A6NFI3 1004 aaPredicted RBP8.44□□□□□ -1.06
CDH10-204ENST00000510477 ZFP91Q96JP5 570 aaPredicted RBP8.43□□□□□ -1.06
CDH10-204ENST00000510477 BCL11AQ9H165 835 aa8.41□□□□□ -1.06
CDH10-204ENST00000510477 RSPH4AQ5TD94 716 aa8.4□□□□□ -1.06
CDH10-204ENST00000510477 ZNF592Q92610 1267 aa8.4□□□□□ -1.06
CDH10-204ENST00000510477 ONECUT3O60422 494 aaPredicted RBP8.4□□□□□ -1.07
CDH10-204ENST00000510477 CERS3Q8IU89 383 aa8.4□□□□□ -1.07
CDH10-204ENST00000510477 MIER1Q8N108 512 aa8.39□□□□□ -1.07
CDH10-204ENST00000510477 TESPA1A2RU30 521 aaPredicted RBP8.38□□□□□ -1.07
CDH10-204ENST00000510477 BARGINQ6ZT62 677 aa8.38□□□□□ -1.07
CDH10-204ENST00000510477 BCL11BQ9C0K0 894 aaPredicted RBP8.38□□□□□ -1.07
CDH10-204ENST00000510477 TMED8Q6PL24 325 aaPredicted RBP8.37□□□□□ -1.07
CDH10-204ENST00000510477 ARID4BQ4LE39 1312 aaPredicted RBP8.36□□□□□ -1.07
CDH10-204ENST00000510477 AK7Q96M32 723 aa8.36□□□□□ -1.07
CDH10-204ENST00000510477 FLIIQ13045 1269 aa8.35□□□□□ -1.07
CDH10-204ENST00000510477 ZNF526Q8TF50 670 aaPredicted RBP8.35□□□□□ -1.07
CDH10-204ENST00000510477 MYT1LQ9UL68 1186 aa8.35□□□□□ -1.07
CDH10-204ENST00000510477 PLEKHG3A1L390 1219 aa8.34□□□□□ -1.07
CDH10-204ENST00000510477 PDE4DQ08499 809 aa8.34□□□□□ -1.07
CDH10-204ENST00000510477 CECR2Q9BXF3 1484 aa8.33□□□□□ -1.08
CDH10-204ENST00000510477 UNCXA6NJT0 531 aa8.33□□□□□ -1.08
CDH10-204ENST00000510477 KDM4AO75164 1064 aa8.33□□□□□ -1.08
CDH10-204ENST00000510477 KRI1Q8N9T8 703 aaKnown RBP8.33□□□□□ -1.08
CDH10-204ENST00000510477 POM121Q96HA1 1249 aa8.32□□□□□ -1.08
CDH10-204ENST00000510477 CCDC97Q96F63 343 aaPredicted RBP8.32□□□□□ -1.08
CDH10-204ENST00000510477 A6NJR5 290 aa8.32□□□□□ -1.08
CDH10-204ENST00000510477 SMARCA5O60264 1052 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms