RNA–Protein interactions for RNA: ENST00000509654.5

LINC00504-203, long intergenic non-protein coding RNA 504, humanhuman

TSL 1 (best)

Gene LINC00504, Length 822 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00504-203ENST00000509654 ZRANB1Q9UGI0 708 aa12.76□□□□□ -0.37
LINC00504-203ENST00000509654 CREBZFQ9NS37 354 aa12.72□□□□□ -0.37
LINC00504-203ENST00000509654 PKD2Q13563 968 aa12.7□□□□□ -0.38
LINC00504-203ENST00000509654 LCE2DQ5TA82 110 aaPredicted RBP12.65□□□□□ -0.38
LINC00504-203ENST00000509654 STAG3Q9UJ98 1225 aa12.65□□□□□ -0.38
LINC00504-203ENST00000509654 DCAF8L2P0C7V8 631 aa12.6□□□□□ -0.39
LINC00504-203ENST00000509654 PELP1Q8IZL8 1130 aaKnown RBP12.6□□□□□ -0.39
LINC00504-203ENST00000509654 FAM163AQ96GL9 167 aaPredicted RBP12.6□□□□□ -0.39
LINC00504-203ENST00000509654 MAMSTRQ6ZN01 415 aa12.57□□□□□ -0.4
LINC00504-203ENST00000509654 HAP1P54257 671 aaPredicted RBP12.56□□□□□ -0.4
LINC00504-203ENST00000509654 POTEJP0CG39 1038 aa12.55□□□□□ -0.4
LINC00504-203ENST00000509654 METRNQ9UJH8 293 aa12.53□□□□□ -0.4
LINC00504-203ENST00000509654 SPOCK2Q92563 424 aa12.52□□□□□ -0.41
LINC00504-203ENST00000509654 MNX1P50219 401 aaPredicted RBP12.48□□□□□ -0.41
LINC00504-203ENST00000509654 PHF12Q96QT6 1004 aa12.48□□□□□ -0.41
LINC00504-203ENST00000509654 C7P10643 843 aa12.47□□□□□ -0.41
LINC00504-203ENST00000509654 KLHL34Q8N239 644 aa12.47□□□□□ -0.41
LINC00504-203ENST00000509654 SLC39A7Q92504 469 aa12.47□□□□□ -0.41
LINC00504-203ENST00000509654 PAK3O75914 559 aaPredicted RBP12.45□□□□□ -0.42
LINC00504-203ENST00000509654 CDAN1Q8IWY9 1227 aa12.44□□□□□ -0.42
LINC00504-203ENST00000509654 SCUBE2Q9NQ36 999 aa12.44□□□□□ -0.42
LINC00504-203ENST00000509654 ECM2O94769 699 aaPredicted RBP12.43□□□□□ -0.42
LINC00504-203ENST00000509654 ASTLQ6HA08 431 aaPredicted RBP12.43□□□□□ -0.42
LINC00504-203ENST00000509654 VSIG10Q8N0Z9 540 aa12.42□□□□□ -0.42
LINC00504-203ENST00000509654 NPM1P06748 294 aaKnown RBP eCLIP12.39□□□□□ -0.43
LINC00504-203ENST00000509654 BBXQ8WY36 941 aaPredicted RBP12.39□□□□□ -0.43
LINC00504-203ENST00000509654 ATMINO43313 823 aaPredicted RBP12.38□□□□□ -0.43
LINC00504-203ENST00000509654 PLCD3Q8N3E9 789 aa12.37□□□□□ -0.43
LINC00504-203ENST00000509654 BCANQ96GW7 911 aa12.36□□□□□ -0.43
LINC00504-203ENST00000509654 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.34□□□□□ -0.43
LINC00504-203ENST00000509654 RGL2O15211 777 aa12.33□□□□□ -0.44
LINC00504-203ENST00000509654 MIER1Q8N108 512 aa12.3□□□□□ -0.44
LINC00504-203ENST00000509654 MS4A3Q96HJ5 214 aa12.29□□□□□ -0.44
LINC00504-203ENST00000509654 TSPYL2Q9H2G4 693 aaPredicted RBP12.29□□□□□ -0.44
LINC00504-203ENST00000509654 PAXIP1Q6ZW49 1069 aaPredicted RBP12.28□□□□□ -0.44
LINC00504-203ENST00000509654 KDM2AQ9Y2K7 1162 aa12.28□□□□□ -0.44
LINC00504-203ENST00000509654 MMRN1Q13201 1228 aa12.23□□□□□ -0.45
LINC00504-203ENST00000509654 CFAP44Q96MT7 982 aa12.23□□□□□ -0.45
LINC00504-203ENST00000509654 TAOK2Q9UL54 1235 aa12.2□□□□□ -0.46
LINC00504-203ENST00000509654 ATN1P54259 1190 aaPredicted RBP12.19□□□□□ -0.46
LINC00504-203ENST00000509654 PRKCSHP14314 528 aaPredicted RBP12.18□□□□□ -0.46
LINC00504-203ENST00000509654 ZBTB47Q9UFB7 747 aaPredicted RBP12.18□□□□□ -0.46
LINC00504-203ENST00000509654 CCDC61Q9Y6R9 512 aa12.18□□□□□ -0.46
LINC00504-203ENST00000509654 POTEFA5A3E0 1075 aa12.17□□□□□ -0.46
LINC00504-203ENST00000509654 CIZ1Q9ULV3 898 aaPredicted RBP12.17□□□□□ -0.46
LINC00504-203ENST00000509654 RASEFQ8IZ41 740 aa12.16□□□□□ -0.46
LINC00504-203ENST00000509654 SPRYD3Q8NCJ5 442 aa12.16□□□□□ -0.46
LINC00504-203ENST00000509654 SPNS2Q8IVW8 549 aa12.15□□□□□ -0.46
LINC00504-203ENST00000509654 PLEKHG5O94827 1062 aa12.14□□□□□ -0.47
LINC00504-203ENST00000509654 CHGAP10645 457 aaKnown RBP12.12□□□□□ -0.47
LINC00504-203ENST00000509654 TSHZ2Q9NRE2 1034 aa12.12□□□□□ -0.47
LINC00504-203ENST00000509654 TRIM41Q8WV44 630 aa12.11□□□□□ -0.47
LINC00504-203ENST00000509654 TRPC6Q9Y210 931 aa12.11□□□□□ -0.47
LINC00504-203ENST00000509654 KIF12Q96FN5 646 aa12.1□□□□□ -0.47
LINC00504-203ENST00000509654 ST18O60284 1047 aa12.08□□□□□ -0.48
LINC00504-203ENST00000509654 MAP3K13O43283 966 aa12.07□□□□□ -0.48
LINC00504-203ENST00000509654 HS6ST3Q8IZP7 471 aa12.06□□□□□ -0.48
LINC00504-203ENST00000509654 RNF25Q96BH1 459 aaPredicted RBP12.04□□□□□ -0.48
LINC00504-203ENST00000509654 DNAJC5Q9H3Z4 198 aa12.02□□□□□ -0.49
LINC00504-203ENST00000509654 BMP2KQ9NSY1 1161 aaPredicted RBP12.02□□□□□ -0.49
LINC00504-203ENST00000509654 NUBP1P53384 320 aa12□□□□□ -0.49
LINC00504-203ENST00000509654 GSE1Q14687 1217 aa12□□□□□ -0.49
LINC00504-203ENST00000509654 TPRNQ4KMQ1 711 aa12□□□□□ -0.49
LINC00504-203ENST00000509654 COLQQ9Y215 455 aaPredicted RBP11.98□□□□□ -0.49
LINC00504-203ENST00000509654 SEC24BO95487 1268 aa11.97□□□□□ -0.49
LINC00504-203ENST00000509654 SLAIN1Q8ND83 568 aa11.95□□□□□ -0.5
LINC00504-203ENST00000509654 TIE1P35590 1138 aa11.92□□□□□ -0.5
LINC00504-203ENST00000509654 PCDHB13Q9Y5F0 798 aa11.92□□□□□ -0.5
LINC00504-203ENST00000509654 NKX1-1Q15270 411 aaPredicted RBP11.91□□□□□ -0.5
LINC00504-203ENST00000509654 TTLL13PA6NNM8 815 aa11.9□□□□□ -0.5
LINC00504-203ENST00000509654 RIOK3O14730 519 aaKnown RBP11.9□□□□□ -0.5
LINC00504-203ENST00000509654 TMEM121BQ9BXQ6 578 aaPredicted RBP11.89□□□□□ -0.51
LINC00504-203ENST00000509654 DCAF8Q5TAQ9 597 aa11.87□□□□□ -0.51
LINC00504-203ENST00000509654 IFNL1Q8IU54 200 aa11.87□□□□□ -0.51
LINC00504-203ENST00000509654 FAM212AQ96EL1 285 aa11.87□□□□□ -0.51
LINC00504-203ENST00000509654 GTPBP6O43824 516 aaPredicted RBP11.84□□□□□ -0.51
LINC00504-203ENST00000509654 TRIM35Q9UPQ4 493 aa11.83□□□□□ -0.52
LINC00504-203ENST00000509654 IER5LQ5T953 404 aa11.82□□□□□ -0.52
LINC00504-203ENST00000509654 VGFO15240 615 aaPredicted RBP11.81□□□□□ -0.52
LINC00504-203ENST00000509654 PYGBP11216 843 aa11.8□□□□□ -0.52
LINC00504-203ENST00000509654 CHRM1P11229 460 aaPredicted RBP11.8□□□□□ -0.52
LINC00504-203ENST00000509654 NBR1Q14596 966 aa11.8□□□□□ -0.52
LINC00504-203ENST00000509654 SGIP1Q9BQI5 828 aa11.8□□□□□ -0.52
LINC00504-203ENST00000509654 STK25O00506 426 aa11.78□□□□□ -0.52
LINC00504-203ENST00000509654 TMEM106CQ9BVX2 250 aa11.78□□□□□ -0.52
LINC00504-203ENST00000509654 MARVELD3Q96A59 401 aa11.77□□□□□ -0.53
LINC00504-203ENST00000509654 PCDHB8Q9UN66 801 aa11.74□□□□□ -0.53
LINC00504-203ENST00000509654 SNPHO15079 494 aa11.73□□□□□ -0.53
LINC00504-203ENST00000509654 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.71□□□□□ -0.53
LINC00504-203ENST00000509654 ZFP91Q96JP5 570 aaPredicted RBP11.71□□□□□ -0.53
LINC00504-203ENST00000509654 BCL11BQ9C0K0 894 aaPredicted RBP11.7□□□□□ -0.54
LINC00504-203ENST00000509654 STK24Q9Y6E0 443 aa11.68□□□□□ -0.54
LINC00504-203ENST00000509654 KRTAP3-3Q9BYR6 98 aa11.66□□□□□ -0.54
LINC00504-203ENST00000509654 KRTAP3-2Q9BYR7 98 aa11.66□□□□□ -0.54
LINC00504-203ENST00000509654 PLCG2P16885 1265 aa11.64□□□□□ -0.55
LINC00504-203ENST00000509654 RYDENQ9NUL5 291 aaKnown RBP11.64□□□□□ -0.55
LINC00504-203ENST00000509654 IRX5P78411 483 aaPredicted RBP11.63□□□□□ -0.55
LINC00504-203ENST00000509654 EMP3P54852 163 aa11.6□□□□□ -0.55
LINC00504-203ENST00000509654 HS3ST6Q96QI5 342 aa11.56□□□□□ -0.56
LINC00504-203ENST00000509654 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms