RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 POTEGQ6S5H5 508 aa10.73□□□□□ -0.69
XRCC4-204ENST00000509268 MAMSTRQ6ZN01 415 aa10.73□□□□□ -0.69
XRCC4-204ENST00000509268 METRNQ9UJH8 293 aa10.72□□□□□ -0.69
XRCC4-204ENST00000509268 ATMINO43313 823 aaPredicted RBP10.71□□□□□ -0.69
XRCC4-204ENST00000509268 MS4A3Q96HJ5 214 aa10.7□□□□□ -0.7
XRCC4-204ENST00000509268 POTEJP0CG39 1038 aa10.62□□□□□ -0.71
XRCC4-204ENST00000509268 TSPYL2Q9H2G4 693 aaPredicted RBP10.6□□□□□ -0.71
XRCC4-204ENST00000509268 SCUBE2Q9NQ36 999 aa10.6□□□□□ -0.71
XRCC4-204ENST00000509268 CCDC61Q9Y6R9 512 aa10.59□□□□□ -0.71
XRCC4-204ENST00000509268 ATN1P54259 1190 aaPredicted RBP10.57□□□□□ -0.72
XRCC4-204ENST00000509268 PROM2Q8N271 834 aa10.56□□□□□ -0.72
XRCC4-204ENST00000509268 KIF12Q96FN5 646 aa10.56□□□□□ -0.72
XRCC4-204ENST00000509268 FAM163AQ96GL9 167 aaPredicted RBP10.53□□□□□ -0.72
XRCC4-204ENST00000509268 TIE1P35590 1138 aa10.51□□□□□ -0.73
XRCC4-204ENST00000509268 PLEKHG5O94827 1062 aa10.5□□□□□ -0.73
XRCC4-204ENST00000509268 LCE2DQ5TA82 110 aaPredicted RBP10.5□□□□□ -0.73
XRCC4-204ENST00000509268 BMP2KQ9NSY1 1161 aaPredicted RBP10.5□□□□□ -0.73
XRCC4-204ENST00000509268 EHMT2Q96KQ7 1210 aa10.49□□□□□ -0.73
XRCC4-204ENST00000509268 POTEFA5A3E0 1075 aa10.47□□□□□ -0.73
XRCC4-204ENST00000509268 MAP3K13O43283 966 aa10.45□□□□□ -0.74
XRCC4-204ENST00000509268 SEC24BO95487 1268 aa10.42□□□□□ -0.74
XRCC4-204ENST00000509268 MIER1Q8N108 512 aa10.42□□□□□ -0.74
XRCC4-204ENST00000509268 TRPC6Q9Y210 931 aa10.42□□□□□ -0.74
XRCC4-204ENST00000509268 SGIP1Q9BQI5 828 aa10.41□□□□□ -0.74
XRCC4-204ENST00000509268 IER5LQ5T953 404 aa10.39□□□□□ -0.75
XRCC4-204ENST00000509268 TTLL13PA6NNM8 815 aa10.39□□□□□ -0.75
XRCC4-204ENST00000509268 RASEFQ8IZ41 740 aa10.39□□□□□ -0.75
XRCC4-204ENST00000509268 COLQQ9Y215 455 aaPredicted RBP10.37□□□□□ -0.75
XRCC4-204ENST00000509268 CDAN1Q8IWY9 1227 aa10.32□□□□□ -0.76
XRCC4-204ENST00000509268 TRIM35Q9UPQ4 493 aa10.32□□□□□ -0.76
XRCC4-204ENST00000509268 ZBTB47Q9UFB7 747 aaPredicted RBP10.31□□□□□ -0.76
XRCC4-204ENST00000509268 PCDHB13Q9Y5F0 798 aa10.31□□□□□ -0.76
XRCC4-204ENST00000509268 PLCD3Q8N3E9 789 aa10.28□□□□□ -0.76
XRCC4-204ENST00000509268 SLAIN1Q8ND83 568 aa10.26□□□□□ -0.77
XRCC4-204ENST00000509268 NUBP1P53384 320 aa10.24□□□□□ -0.77
XRCC4-204ENST00000509268 ST18O60284 1047 aa10.23□□□□□ -0.77
XRCC4-204ENST00000509268 PLCG2P16885 1265 aa10.22□□□□□ -0.77
XRCC4-204ENST00000509268 IFNL1Q8IU54 200 aa10.22□□□□□ -0.77
XRCC4-204ENST00000509268 TMEM106CQ9BVX2 250 aa10.22□□□□□ -0.77
XRCC4-204ENST00000509268 FAM212AQ96EL1 285 aa10.2□□□□□ -0.78
XRCC4-204ENST00000509268 IRX5P78411 483 aaPredicted RBP10.17□□□□□ -0.78
XRCC4-204ENST00000509268 TMEM121BQ9BXQ6 578 aaPredicted RBP10.17□□□□□ -0.78
XRCC4-204ENST00000509268 SNPHO15079 494 aa10.16□□□□□ -0.78
XRCC4-204ENST00000509268 OCEL1Q9H607 264 aa10.14□□□□□ -0.79
XRCC4-204ENST00000509268 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.1□□□□□ -0.79
XRCC4-204ENST00000509268 MMRN1Q13201 1228 aa10.09□□□□□ -0.79
XRCC4-204ENST00000509268 SPNS2Q8IVW8 549 aa10.08□□□□□ -0.8
XRCC4-204ENST00000509268 DCAF8Q5TAQ9 597 aa10.05□□□□□ -0.8
XRCC4-204ENST00000509268 PYGBP11216 843 aa10.01□□□□□ -0.81
XRCC4-204ENST00000509268 L3MBTL3Q96JM7 780 aaPredicted RBP9.99□□□□□ -0.81
XRCC4-204ENST00000509268 MARVELD3Q96A59 401 aa9.98□□□□□ -0.81
XRCC4-204ENST00000509268 PCDHB8Q9UN66 801 aa9.98□□□□□ -0.81
XRCC4-204ENST00000509268 C3orf67Q6ZVT6 689 aa9.96□□□□□ -0.82
XRCC4-204ENST00000509268 ZNF467Q7Z7K2 595 aaPredicted RBP9.94□□□□□ -0.82
XRCC4-204ENST00000509268 PDCD7Q8N8D1 485 aaKnown RBP9.94□□□□□ -0.82
XRCC4-204ENST00000509268 GOLGA2Q08379 1002 aa9.93□□□□□ -0.82
XRCC4-204ENST00000509268 MKRN3Q13064 507 aaKnown RBP9.93□□□□□ -0.82
XRCC4-204ENST00000509268 EMP3P54852 163 aa9.92□□□□□ -0.82
XRCC4-204ENST00000509268 FBXO3Q9UK99 471 aa9.92□□□□□ -0.82
XRCC4-204ENST00000509268 GSE1Q14687 1217 aa9.92□□□□□ -0.82
XRCC4-204ENST00000509268 FKBP8Q14318 412 aa9.9□□□□□ -0.82
XRCC4-204ENST00000509268 CHRM1P11229 460 aaPredicted RBP9.89□□□□□ -0.83
XRCC4-204ENST00000509268 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.87□□□□□ -0.83
XRCC4-204ENST00000509268 HS3ST6Q96QI5 342 aa9.86□□□□□ -0.83
XRCC4-204ENST00000509268 KRTAP3-3Q9BYR6 98 aa9.84□□□□□ -0.83
XRCC4-204ENST00000509268 KRTAP3-2Q9BYR7 98 aa9.84□□□□□ -0.83
XRCC4-204ENST00000509268 FAM205CA6NFA0 338 aa9.83□□□□□ -0.84
XRCC4-204ENST00000509268 PSEN1P49768 467 aa9.83□□□□□ -0.84
XRCC4-204ENST00000509268 ILDR1Q86SU0 546 aaPredicted RBP9.83□□□□□ -0.84
XRCC4-204ENST00000509268 POTEB3A0JP26 581 aa9.81□□□□□ -0.84
XRCC4-204ENST00000509268 POTEBQ6S5H4 581 aa9.81□□□□□ -0.84
XRCC4-204ENST00000509268 KLHL34Q8N239 644 aa9.81□□□□□ -0.84
XRCC4-204ENST00000509268 G3V3G9 751 aa9.77□□□□□ -0.85
XRCC4-204ENST00000509268 PDAP1Q13442 181 aaKnown RBP9.77□□□□□ -0.85
XRCC4-204ENST00000509268 VASPP50552 380 aaPredicted RBP9.74□□□□□ -0.85
XRCC4-204ENST00000509268 BOLA1Q9Y3E2 137 aa9.74□□□□□ -0.85
XRCC4-204ENST00000509268 HOXB1P14653 301 aaPredicted RBP9.73□□□□□ -0.85
XRCC4-204ENST00000509268 HOXB3P14651 431 aaPredicted RBP9.72□□□□□ -0.85
XRCC4-204ENST00000509268 DPY19L2Q6NUT2 758 aa9.71□□□□□ -0.85
XRCC4-204ENST00000509268 ZNF710Q8N1W2 664 aa9.71□□□□□ -0.85
XRCC4-204ENST00000509268 DOK7Q18PE1 504 aa9.71□□□□□ -0.86
XRCC4-204ENST00000509268 ERBB3P21860 1342 aa9.68□□□□□ -0.86
XRCC4-204ENST00000509268 CABP2Q9NPB3 220 aa9.68□□□□□ -0.86
XRCC4-204ENST00000509268 RIMBP2O15034 1052 aa9.66□□□□□ -0.86
XRCC4-204ENST00000509268 RNF166Q96A37 237 aaPredicted RBP9.63□□□□□ -0.87
XRCC4-204ENST00000509268 SPOCK2Q92563 424 aa9.62□□□□□ -0.87
XRCC4-204ENST00000509268 ZSWIM6Q9HCJ5 1215 aa9.61□□□□□ -0.87
XRCC4-204ENST00000509268 CIZ1Q9ULV3 898 aaPredicted RBP9.59□□□□□ -0.87
XRCC4-204ENST00000509268 MYT1LQ9UL68 1186 aa9.58□□□□□ -0.88
XRCC4-204ENST00000509268 VARS2Q5ST30 1063 aaKnown RBP9.58□□□□□ -0.88
XRCC4-204ENST00000509268 ZNF687Q8N1G0 1237 aa9.58□□□□□ -0.88
XRCC4-204ENST00000509268 PTGER2P43116 358 aa9.57□□□□□ -0.88
XRCC4-204ENST00000509268 TRIM41Q8WV44 630 aa9.54□□□□□ -0.88
XRCC4-204ENST00000509268 EFCAB3Q8N7B9 438 aa9.53□□□□□ -0.88
XRCC4-204ENST00000509268 IFNLR1Q8IU57 520 aaPredicted RBP9.51□□□□□ -0.89
XRCC4-204ENST00000509268 GPR153Q6NV75 609 aa9.5□□□□□ -0.89
XRCC4-204ENST00000509268 MICALL2Q8IY33 904 aa9.5□□□□□ -0.89
XRCC4-204ENST00000509268 SOX12O15370 315 aa9.5□□□□□ -0.89
XRCC4-204ENST00000509268 TMEM92Q6UXU6 159 aa9.47□□□□□ -0.89
XRCC4-204ENST00000509268 ARSIQ5FYB1 569 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms