RNA–Protein interactions for RNA: ENST00000509227.1

PAPD4-212, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 4

Gene PAPD4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-212ENST00000509227 POTEJP0CG39 1038 aa14.9□□□□□ -0.02
PAPD4-212ENST00000509227 MAMSTRQ6ZN01 415 aa14.9□□□□□ -0.02
PAPD4-212ENST00000509227 ATMINO43313 823 aaPredicted RBP14.88□□□□□ -0.03
PAPD4-212ENST00000509227 MS4A3Q96HJ5 214 aa14.86□□□□□ -0.03
PAPD4-212ENST00000509227 SPDYE4A6NLX3 237 aa14.83□□□□□ -0.04
PAPD4-212ENST00000509227 LCE2DQ5TA82 110 aaPredicted RBP14.82□□□□□ -0.04
PAPD4-212ENST00000509227 EHMT2Q96KQ7 1210 aa14.76□□□□□ -0.05
PAPD4-212ENST00000509227 SCUBE2Q9NQ36 999 aa14.76□□□□□ -0.05
PAPD4-212ENST00000509227 FAM163AQ96GL9 167 aaPredicted RBP14.74□□□□□ -0.05
PAPD4-212ENST00000509227 CSRNP3Q8WYN3 585 aa14.71□□□□□ -0.05
PAPD4-212ENST00000509227 ATN1P54259 1190 aaPredicted RBP14.69□□□□□ -0.06
PAPD4-212ENST00000509227 CCDC61Q9Y6R9 512 aa14.63□□□□□ -0.07
PAPD4-212ENST00000509227 TSPYL2Q9H2G4 693 aaPredicted RBP14.62□□□□□ -0.07
PAPD4-212ENST00000509227 POTEFA5A3E0 1075 aa14.61□□□□□ -0.07
PAPD4-212ENST00000509227 KIF12Q96FN5 646 aa14.59□□□□□ -0.07
PAPD4-212ENST00000509227 BMP2KQ9NSY1 1161 aaPredicted RBP14.58□□□□□ -0.08
PAPD4-212ENST00000509227 TIE1P35590 1138 aa14.52□□□□□ -0.09
PAPD4-212ENST00000509227 TRPC6Q9Y210 931 aa14.5□□□□□ -0.09
PAPD4-212ENST00000509227 CDAN1Q8IWY9 1227 aa14.49□□□□□ -0.09
PAPD4-212ENST00000509227 MAP3K13O43283 966 aa14.44□□□□□ -0.1
PAPD4-212ENST00000509227 COLQQ9Y215 455 aaPredicted RBP14.44□□□□□ -0.1
PAPD4-212ENST00000509227 SEC24BO95487 1268 aa14.42□□□□□ -0.1
PAPD4-212ENST00000509227 PROM2Q8N271 834 aa14.41□□□□□ -0.1
PAPD4-212ENST00000509227 TTLL13PA6NNM8 815 aa14.4□□□□□ -0.1
PAPD4-212ENST00000509227 IER5LQ5T953 404 aa14.36□□□□□ -0.11
PAPD4-212ENST00000509227 RASEFQ8IZ41 740 aa14.33□□□□□ -0.12
PAPD4-212ENST00000509227 ST18O60284 1047 aa14.3□□□□□ -0.12
PAPD4-212ENST00000509227 TRIM35Q9UPQ4 493 aa14.3□□□□□ -0.12
PAPD4-212ENST00000509227 PLEKHG5O94827 1062 aa14.29□□□□□ -0.12
PAPD4-212ENST00000509227 SGIP1Q9BQI5 828 aa14.29□□□□□ -0.12
PAPD4-212ENST00000509227 SLAIN1Q8ND83 568 aa14.28□□□□□ -0.12
PAPD4-212ENST00000509227 MIER1Q8N108 512 aa14.23□□□□□ -0.13
PAPD4-212ENST00000509227 PCDHB13Q9Y5F0 798 aa14.21□□□□□ -0.13
PAPD4-212ENST00000509227 MMRN1Q13201 1228 aa14.19□□□□□ -0.14
PAPD4-212ENST00000509227 SPNS2Q8IVW8 549 aa14.16□□□□□ -0.14
PAPD4-212ENST00000509227 TMEM121BQ9BXQ6 578 aaPredicted RBP14.15□□□□□ -0.14
PAPD4-212ENST00000509227 PLCG2P16885 1265 aa14.13□□□□□ -0.15
PAPD4-212ENST00000509227 IFNL1Q8IU54 200 aa14.11□□□□□ -0.15
PAPD4-212ENST00000509227 IRX5P78411 483 aaPredicted RBP14.09□□□□□ -0.15
PAPD4-212ENST00000509227 TMEM106CQ9BVX2 250 aa14.09□□□□□ -0.15
PAPD4-212ENST00000509227 SNPHO15079 494 aa14.06□□□□□ -0.16
PAPD4-212ENST00000509227 NUBP1P53384 320 aa14.04□□□□□ -0.16
PAPD4-212ENST00000509227 PLCD3Q8N3E9 789 aa14.02□□□□□ -0.17
PAPD4-212ENST00000509227 ZBTB47Q9UFB7 747 aaPredicted RBP14.02□□□□□ -0.17
PAPD4-212ENST00000509227 OCEL1Q9H607 264 aa14□□□□□ -0.17
PAPD4-212ENST00000509227 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.97□□□□□ -0.17
PAPD4-212ENST00000509227 MARVELD3Q96A59 401 aa13.96□□□□□ -0.17
PAPD4-212ENST00000509227 FAM212AQ96EL1 285 aa13.95□□□□□ -0.18
PAPD4-212ENST00000509227 EMP3P54852 163 aa13.83□□□□□ -0.2
PAPD4-212ENST00000509227 KRTAP3-3Q9BYR6 98 aa13.8□□□□□ -0.2
PAPD4-212ENST00000509227 KRTAP3-2Q9BYR7 98 aa13.8□□□□□ -0.2
PAPD4-212ENST00000509227 HS3ST6Q96QI5 342 aa13.77□□□□□ -0.21
PAPD4-212ENST00000509227 C3orf67Q6ZVT6 689 aa13.76□□□□□ -0.21
PAPD4-212ENST00000509227 PDCD7Q8N8D1 485 aaKnown RBP13.76□□□□□ -0.21
PAPD4-212ENST00000509227 POTEB3A0JP26 581 aa13.75□□□□□ -0.21
PAPD4-212ENST00000509227 PYGBP11216 843 aa13.75□□□□□ -0.21
PAPD4-212ENST00000509227 POTEBQ6S5H4 581 aa13.75□□□□□ -0.21
PAPD4-212ENST00000509227 L3MBTL3Q96JM7 780 aaPredicted RBP13.73□□□□□ -0.21
PAPD4-212ENST00000509227 PCDHB8Q9UN66 801 aa13.73□□□□□ -0.21
PAPD4-212ENST00000509227 DCAF8Q5TAQ9 597 aa13.72□□□□□ -0.21
PAPD4-212ENST00000509227 FAM205CA6NFA0 338 aa13.71□□□□□ -0.21
PAPD4-212ENST00000509227 MKRN3Q13064 507 aaKnown RBP13.64□□□□□ -0.23
PAPD4-212ENST00000509227 GOLGA2Q08379 1002 aa13.61□□□□□ -0.23
PAPD4-212ENST00000509227 ZNF467Q7Z7K2 595 aaPredicted RBP13.59□□□□□ -0.23
PAPD4-212ENST00000509227 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.58□□□□□ -0.245e-7■□□□□ 9.9
PAPD4-212ENST00000509227 ILDR1Q86SU0 546 aaPredicted RBP13.54□□□□□ -0.24
PAPD4-212ENST00000509227 HOXB3P14651 431 aaPredicted RBP13.5□□□□□ -0.25
PAPD4-212ENST00000509227 HOXB1P14653 301 aaPredicted RBP13.49□□□□□ -0.25
PAPD4-212ENST00000509227 CHRM1P11229 460 aaPredicted RBP13.47□□□□□ -0.25
PAPD4-212ENST00000509227 PSEN1P49768 467 aa13.47□□□□□ -0.25
PAPD4-212ENST00000509227 GSE1Q14687 1217 aa13.47□□□□□ -0.25
PAPD4-212ENST00000509227 RNF166Q96A37 237 aaPredicted RBP13.47□□□□□ -0.25
PAPD4-212ENST00000509227 DPY19L2Q6NUT2 758 aa13.43□□□□□ -0.26
PAPD4-212ENST00000509227 ZNF710Q8N1W2 664 aa13.42□□□□□ -0.26
PAPD4-212ENST00000509227 BOLA1Q9Y3E2 137 aa13.42□□□□□ -0.26
PAPD4-212ENST00000509227 ERBB3P21860 1342 aa13.41□□□□□ -0.26
PAPD4-212ENST00000509227 G3V3G9 751 aa13.39□□□□□ -0.27
PAPD4-212ENST00000509227 DOK7Q18PE1 504 aa13.39□□□□□ -0.27
PAPD4-212ENST00000509227 MYT1LQ9UL68 1186 aa13.36□□□□□ -0.27
PAPD4-212ENST00000509227 PDAP1Q13442 181 aaKnown RBP13.35□□□□□ -0.27
PAPD4-212ENST00000509227 FKBP8Q14318 412 aa13.35□□□□□ -0.27
PAPD4-212ENST00000509227 FBXO3Q9UK99 471 aa13.35□□□□□ -0.27
PAPD4-212ENST00000509227 VARS2Q5ST30 1063 aaKnown RBP13.31□□□□□ -0.28
PAPD4-212ENST00000509227 RIMBP2O15034 1052 aa13.3□□□□□ -0.28
PAPD4-212ENST00000509227 KLHL34Q8N239 644 aa13.29□□□□□ -0.28
PAPD4-212ENST00000509227 CABP2Q9NPB3 220 aa13.29□□□□□ -0.28
PAPD4-212ENST00000509227 ZNF687Q8N1G0 1237 aa13.27□□□□□ -0.29
PAPD4-212ENST00000509227 PTGER2P43116 358 aa13.26□□□□□ -0.29
PAPD4-212ENST00000509227 ZSWIM6Q9HCJ5 1215 aa13.25□□□□□ -0.29
PAPD4-212ENST00000509227 VASPP50552 380 aaPredicted RBP13.19□□□□□ -0.3
PAPD4-212ENST00000509227 GPR153Q6NV75 609 aa13.16□□□□□ -0.3
PAPD4-212ENST00000509227 TMEM92Q6UXU6 159 aa13.11□□□□□ -0.31
PAPD4-212ENST00000509227 ANKRD13DQ6ZTN6 518 aa13.08□□□□□ -0.32
PAPD4-212ENST00000509227 MICALL2Q8IY33 904 aa13.07□□□□□ -0.32
PAPD4-212ENST00000509227 EFCAB3Q8N7B9 438 aa13.06□□□□□ -0.32
PAPD4-212ENST00000509227 CIZ1Q9ULV3 898 aaPredicted RBP13.03□□□□□ -0.32
PAPD4-212ENST00000509227 LSM11P83369 360 aaKnown RBP eCLIP13□□□□□ -0.33
PAPD4-212ENST00000509227 ARSIQ5FYB1 569 aa13□□□□□ -0.33
PAPD4-212ENST00000509227 ZNF316A6NFI3 1004 aaPredicted RBP12.99□□□□□ -0.33
PAPD4-212ENST00000509227 SPOCK2Q92563 424 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms