RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 METRNQ9UJH8 293 aa9.3□□□□□ -0.92
DEPDC1B-204ENST00000509006 ATMINO43313 823 aaPredicted RBP9.29□□□□□ -0.92
DEPDC1B-204ENST00000509006 CCDC61Q9Y6R9 512 aa9.26□□□□□ -0.93
DEPDC1B-204ENST00000509006 POTEJP0CG39 1038 aa9.24□□□□□ -0.93
DEPDC1B-204ENST00000509006 SLC39A7Q92504 469 aa9.24□□□□□ -0.93
DEPDC1B-204ENST00000509006 POTEMA6NI47 508 aa9.22□□□□□ -0.93
DEPDC1B-204ENST00000509006 C7P10643 843 aa9.22□□□□□ -0.93
DEPDC1B-204ENST00000509006 ATN1P54259 1190 aaPredicted RBP9.21□□□□□ -0.94
DEPDC1B-204ENST00000509006 KIF12Q96FN5 646 aa9.21□□□□□ -0.94
DEPDC1B-204ENST00000509006 TRPC6Q9Y210 931 aa9.2□□□□□ -0.94
DEPDC1B-204ENST00000509006 POTEGQ6S5H5 508 aa9.18□□□□□ -0.94
DEPDC1B-204ENST00000509006 RASEFQ8IZ41 740 aa9.18□□□□□ -0.94
DEPDC1B-204ENST00000509006 BMP2KQ9NSY1 1161 aaPredicted RBP9.18□□□□□ -0.94
DEPDC1B-204ENST00000509006 MIER1Q8N108 512 aa9.17□□□□□ -0.94
DEPDC1B-204ENST00000509006 PCDH10Q9P2E7 1040 aa9.17□□□□□ -0.94
DEPDC1B-204ENST00000509006 MAP3K13O43283 966 aa9.16□□□□□ -0.94
DEPDC1B-204ENST00000509006 POTEFA5A3E0 1075 aa9.14□□□□□ -0.95
DEPDC1B-204ENST00000509006 PLEKHG5O94827 1062 aa9.14□□□□□ -0.95
DEPDC1B-204ENST00000509006 MAMSTRQ6ZN01 415 aa9.13□□□□□ -0.95
DEPDC1B-204ENST00000509006 TIE1P35590 1138 aa9.1□□□□□ -0.95
DEPDC1B-204ENST00000509006 LCE2DQ5TA82 110 aaPredicted RBP9.1□□□□□ -0.95
DEPDC1B-204ENST00000509006 SCUBE2Q9NQ36 999 aa9.1□□□□□ -0.95
DEPDC1B-204ENST00000509006 TTLL13PA6NNM8 815 aa9.08□□□□□ -0.96
DEPDC1B-204ENST00000509006 PLCD3Q8N3E9 789 aa9.08□□□□□ -0.96
DEPDC1B-204ENST00000509006 FAM163AQ96GL9 167 aaPredicted RBP9.06□□□□□ -0.96
DEPDC1B-204ENST00000509006 COLQQ9Y215 455 aaPredicted RBP9.06□□□□□ -0.96
DEPDC1B-204ENST00000509006 PCDHB13Q9Y5F0 798 aa9.04□□□□□ -0.96
DEPDC1B-204ENST00000509006 NUBP1P53384 320 aa9.03□□□□□ -0.96
DEPDC1B-204ENST00000509006 SEC24BO95487 1268 aa9.02□□□□□ -0.97
DEPDC1B-204ENST00000509006 TRIM35Q9UPQ4 493 aa9.02□□□□□ -0.97
DEPDC1B-204ENST00000509006 IFNL1Q8IU54 200 aa8.99□□□□□ -0.97
DEPDC1B-204ENST00000509006 SGIP1Q9BQI5 828 aa8.99□□□□□ -0.97
DEPDC1B-204ENST00000509006 ZBTB47Q9UFB7 747 aaPredicted RBP8.98□□□□□ -0.97
DEPDC1B-204ENST00000509006 IER5LQ5T953 404 aa8.96□□□□□ -0.98
DEPDC1B-204ENST00000509006 FAM212AQ96EL1 285 aa8.96□□□□□ -0.98
DEPDC1B-204ENST00000509006 FKBP8Q14318 412 aa8.95□□□□□ -0.98
DEPDC1B-204ENST00000509006 TMEM106CQ9BVX2 250 aa8.94□□□□□ -0.98
DEPDC1B-204ENST00000509006 PLCG2P16885 1265 aa8.89□□□□□ -0.99
DEPDC1B-204ENST00000509006 SLAIN1Q8ND83 568 aa8.89□□□□□ -0.99
DEPDC1B-204ENST00000509006 PYGBP11216 843 aa8.87□□□□□ -0.99
DEPDC1B-204ENST00000509006 IRX5P78411 483 aaPredicted RBP8.87□□□□□ -0.99
DEPDC1B-204ENST00000509006 DCAF8Q5TAQ9 597 aa8.85□□□□□ -0.99
DEPDC1B-204ENST00000509006 CDAN1Q8IWY9 1227 aa8.85□□□□□ -0.99
DEPDC1B-204ENST00000509006 ST18O60284 1047 aa8.84□□□□□ -0.99
DEPDC1B-204ENST00000509006 PCDHB8Q9UN66 801 aa8.83□□□□□ -1
DEPDC1B-204ENST00000509006 OCEL1Q9H607 264 aa8.8□□□□□ -1
DEPDC1B-204ENST00000509006 FBXO3Q9UK99 471 aa8.76□□□□□ -1.01
DEPDC1B-204ENST00000509006 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.74□□□□□ -1.01
DEPDC1B-204ENST00000509006 PDCD7Q8N8D1 485 aaKnown RBP8.73□□□□□ -1.01
DEPDC1B-204ENST00000509006 VASPP50552 380 aaPredicted RBP8.72□□□□□ -1.01
DEPDC1B-204ENST00000509006 KLHL34Q8N239 644 aa8.72□□□□□ -1.01
DEPDC1B-204ENST00000509006 MARVELD3Q96A59 401 aa8.7□□□□□ -1.02
DEPDC1B-204ENST00000509006 GSE1Q14687 1217 aa8.69□□□□□ -1.02
DEPDC1B-204ENST00000509006 ZNF467Q7Z7K2 595 aaPredicted RBP8.69□□□□□ -1.02
DEPDC1B-204ENST00000509006 TMEM121BQ9BXQ6 578 aaPredicted RBP8.69□□□□□ -1.02
DEPDC1B-204ENST00000509006 SNPHO15079 494 aa8.68□□□□□ -1.02
DEPDC1B-204ENST00000509006 GOLGA2Q08379 1002 aa8.67□□□□□ -1.02
DEPDC1B-204ENST00000509006 MKRN3Q13064 507 aaKnown RBP8.67□□□□□ -1.02
DEPDC1B-204ENST00000509006 C3orf67Q6ZVT6 689 aa8.67□□□□□ -1.02
DEPDC1B-204ENST00000509006 PSEN1P49768 467 aa8.65□□□□□ -1.02
DEPDC1B-204ENST00000509006 MMRN1Q13201 1228 aa8.64□□□□□ -1.03
DEPDC1B-204ENST00000509006 SPNS2Q8IVW8 549 aa8.64□□□□□ -1.03
DEPDC1B-204ENST00000509006 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.64□□□□□ -1.03
DEPDC1B-204ENST00000509006 CHRM1P11229 460 aaPredicted RBP8.63□□□□□ -1.03
DEPDC1B-204ENST00000509006 L3MBTL3Q96JM7 780 aaPredicted RBP8.62□□□□□ -1.03
DEPDC1B-204ENST00000509006 EMP3P54852 163 aa8.6□□□□□ -1.03
DEPDC1B-204ENST00000509006 DPY19L2Q6NUT2 758 aa8.59□□□□□ -1.03
DEPDC1B-204ENST00000509006 PDAP1Q13442 181 aaKnown RBP8.58□□□□□ -1.04
DEPDC1B-204ENST00000509006 ILDR1Q86SU0 546 aaPredicted RBP8.58□□□□□ -1.04
DEPDC1B-204ENST00000509006 POTEB3A0JP26 581 aa8.57□□□□□ -1.04
DEPDC1B-204ENST00000509006 POTEBQ6S5H4 581 aa8.57□□□□□ -1.04
DEPDC1B-204ENST00000509006 CABP2Q9NPB3 220 aa8.56□□□□□ -1.04
DEPDC1B-204ENST00000509006 CIZ1Q9ULV3 898 aaPredicted RBP8.56□□□□□ -1.04
DEPDC1B-204ENST00000509006 FAM205CA6NFA0 338 aa8.55□□□□□ -1.04
DEPDC1B-204ENST00000509006 IFNLR1Q8IU57 520 aaPredicted RBP8.55□□□□□ -1.04
DEPDC1B-204ENST00000509006 HS3ST6Q96QI5 342 aa8.55□□□□□ -1.04
DEPDC1B-204ENST00000509006 SPOCK2Q92563 424 aa8.53□□□□□ -1.04
DEPDC1B-204ENST00000509006 KRTAP3-3Q9BYR6 98 aa8.53□□□□□ -1.04
DEPDC1B-204ENST00000509006 KRTAP3-2Q9BYR7 98 aa8.53□□□□□ -1.04
DEPDC1B-204ENST00000509006 BOLA1Q9Y3E2 137 aa8.52□□□□□ -1.05
DEPDC1B-204ENST00000509006 G3V3G9 751 aa8.49□□□□□ -1.05
DEPDC1B-204ENST00000509006 HOXB3P14651 431 aaPredicted RBP8.49□□□□□ -1.05
DEPDC1B-204ENST00000509006 ZNF710Q8N1W2 664 aa8.43□□□□□ -1.06
DEPDC1B-204ENST00000509006 EFCAB3Q8N7B9 438 aa8.43□□□□□ -1.06
DEPDC1B-204ENST00000509006 HOXB1P14653 301 aaPredicted RBP8.42□□□□□ -1.06
DEPDC1B-204ENST00000509006 DOK7Q18PE1 504 aa8.4□□□□□ -1.06
DEPDC1B-204ENST00000509006 ERBB3P21860 1342 aa8.39□□□□□ -1.07
DEPDC1B-204ENST00000509006 TMEM92Q6UXU6 159 aa8.38□□□□□ -1.07
DEPDC1B-204ENST00000509006 MICALL2Q8IY33 904 aa8.37□□□□□ -1.07
DEPDC1B-204ENST00000509006 VARS2Q5ST30 1063 aaKnown RBP8.35□□□□□ -1.07
DEPDC1B-204ENST00000509006 TRIM41Q8WV44 630 aa8.35□□□□□ -1.07
DEPDC1B-204ENST00000509006 RNF25Q96BH1 459 aaPredicted RBP8.35□□□□□ -1.07
DEPDC1B-204ENST00000509006 RIMBP2O15034 1052 aa8.34□□□□□ -1.07
DEPDC1B-204ENST00000509006 MS4A4AQ96JQ5 239 aa8.34□□□□□ -1.07
DEPDC1B-204ENST00000509006 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.32□□□□□ -1.08
DEPDC1B-204ENST00000509006 ZFP91Q96JP5 570 aaPredicted RBP8.32□□□□□ -1.08
DEPDC1B-204ENST00000509006 RIOK3O14730 519 aaKnown RBP8.31□□□□□ -1.08
DEPDC1B-204ENST00000509006 PHF8Q9UPP1 1060 aa8.31□□□□□ -1.08
DEPDC1B-204ENST00000509006 RNF166Q96A37 237 aaPredicted RBP8.3□□□□□ -1.08
DEPDC1B-204ENST00000509006 SOX12O15370 315 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms