RNA–Protein interactions for RNA: ENST00000508692.1

COL4A3BP-205, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-205ENST00000508692 POTEMA6NI47 508 aa10.86□□□□□ -0.67
COL4A3BP-205ENST00000508692 POTEJP0CG39 1038 aa10.84□□□□□ -0.67
COL4A3BP-205ENST00000508692 TSPYL2Q9H2G4 693 aaPredicted RBP10.84□□□□□ -0.67
COL4A3BP-205ENST00000508692 POTEGQ6S5H5 508 aa10.83□□□□□ -0.68
COL4A3BP-205ENST00000508692 SLC39A7Q92504 469 aa10.82□□□□□ -0.68
COL4A3BP-205ENST00000508692 C7P10643 843 aa10.81□□□□□ -0.68
COL4A3BP-205ENST00000508692 PROM2Q8N271 834 aa10.8□□□□□ -0.68
COL4A3BP-205ENST00000508692 CCDC61Q9Y6R9 512 aa10.8□□□□□ -0.68
COL4A3BP-205ENST00000508692 ATN1P54259 1190 aaPredicted RBP10.77□□□□□ -0.69
COL4A3BP-205ENST00000508692 KIF12Q96FN5 646 aa10.75□□□□□ -0.69
COL4A3BP-205ENST00000508692 TRPC6Q9Y210 931 aa10.73□□□□□ -0.69
COL4A3BP-205ENST00000508692 MAMSTRQ6ZN01 415 aa10.72□□□□□ -0.69
COL4A3BP-205ENST00000508692 BMP2KQ9NSY1 1161 aaPredicted RBP10.71□□□□□ -0.69
COL4A3BP-205ENST00000508692 LCE2DQ5TA82 110 aaPredicted RBP10.7□□□□□ -0.7
COL4A3BP-205ENST00000508692 POTEFA5A3E0 1075 aa10.69□□□□□ -0.7
COL4A3BP-205ENST00000508692 MAP3K13O43283 966 aa10.68□□□□□ -0.7
COL4A3BP-205ENST00000508692 RASEFQ8IZ41 740 aa10.68□□□□□ -0.7
COL4A3BP-205ENST00000508692 SCUBE2Q9NQ36 999 aa10.67□□□□□ -0.7
COL4A3BP-205ENST00000508692 FAM163AQ96GL9 167 aaPredicted RBP10.65□□□□□ -0.7
COL4A3BP-205ENST00000508692 MIER1Q8N108 512 aa10.64□□□□□ -0.71
COL4A3BP-205ENST00000508692 TIE1P35590 1138 aa10.62□□□□□ -0.71
COL4A3BP-205ENST00000508692 PLEKHG5O94827 1062 aa10.61□□□□□ -0.71
COL4A3BP-205ENST00000508692 PCDH10Q9P2E7 1040 aa10.61□□□□□ -0.71
COL4A3BP-205ENST00000508692 COLQQ9Y215 455 aaPredicted RBP10.6□□□□□ -0.71
COL4A3BP-205ENST00000508692 TTLL13PA6NNM8 815 aa10.59□□□□□ -0.71
COL4A3BP-205ENST00000508692 SEC24BO95487 1268 aa10.55□□□□□ -0.72
COL4A3BP-205ENST00000508692 PLCD3Q8N3E9 789 aa10.52□□□□□ -0.73
COL4A3BP-205ENST00000508692 TRIM35Q9UPQ4 493 aa10.52□□□□□ -0.73
COL4A3BP-205ENST00000508692 PCDHB13Q9Y5F0 798 aa10.52□□□□□ -0.73
COL4A3BP-205ENST00000508692 NUBP1P53384 320 aa10.48□□□□□ -0.73
COL4A3BP-205ENST00000508692 IER5LQ5T953 404 aa10.47□□□□□ -0.73
COL4A3BP-205ENST00000508692 SGIP1Q9BQI5 828 aa10.47□□□□□ -0.73
COL4A3BP-205ENST00000508692 IFNL1Q8IU54 200 aa10.46□□□□□ -0.73
COL4A3BP-205ENST00000508692 TMEM106CQ9BVX2 250 aa10.43□□□□□ -0.74
COL4A3BP-205ENST00000508692 CDAN1Q8IWY9 1227 aa10.41□□□□□ -0.74
COL4A3BP-205ENST00000508692 SLAIN1Q8ND83 568 aa10.41□□□□□ -0.74
COL4A3BP-205ENST00000508692 ZBTB47Q9UFB7 747 aaPredicted RBP10.41□□□□□ -0.74
COL4A3BP-205ENST00000508692 FAM212AQ96EL1 285 aa10.4□□□□□ -0.74
COL4A3BP-205ENST00000508692 ST18O60284 1047 aa10.37□□□□□ -0.75
COL4A3BP-205ENST00000508692 PLCG2P16885 1265 aa10.37□□□□□ -0.75
COL4A3BP-205ENST00000508692 IRX5P78411 483 aaPredicted RBP10.34□□□□□ -0.75
COL4A3BP-205ENST00000508692 PYGBP11216 843 aa10.3□□□□□ -0.76
COL4A3BP-205ENST00000508692 FKBP8Q14318 412 aa10.29□□□□□ -0.76
COL4A3BP-205ENST00000508692 DCAF8Q5TAQ9 597 aa10.27□□□□□ -0.77
COL4A3BP-205ENST00000508692 OCEL1Q9H607 264 aa10.27□□□□□ -0.77
COL4A3BP-205ENST00000508692 PCDHB8Q9UN66 801 aa10.27□□□□□ -0.77
COL4A3BP-205ENST00000508692 MARVELD3Q96A59 401 aa10.2□□□□□ -0.78
COL4A3BP-205ENST00000508692 TMEM121BQ9BXQ6 578 aaPredicted RBP10.2□□□□□ -0.78
COL4A3BP-205ENST00000508692 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.2□□□□□ -0.78
COL4A3BP-205ENST00000508692 MMRN1Q13201 1228 aa10.17□□□□□ -0.78
COL4A3BP-205ENST00000508692 SPNS2Q8IVW8 549 aa10.17□□□□□ -0.78
COL4A3BP-205ENST00000508692 PDCD7Q8N8D1 485 aaKnown RBP10.17□□□□□ -0.78
COL4A3BP-205ENST00000508692 SNPHO15079 494 aa10.16□□□□□ -0.78
COL4A3BP-205ENST00000508692 C3orf67Q6ZVT6 689 aa10.11□□□□□ -0.79
COL4A3BP-205ENST00000508692 FBXO3Q9UK99 471 aa10.11□□□□□ -0.79
COL4A3BP-205ENST00000508692 ZNF467Q7Z7K2 595 aaPredicted RBP10.1□□□□□ -0.79
COL4A3BP-205ENST00000508692 MKRN3Q13064 507 aaKnown RBP10.09□□□□□ -0.79
COL4A3BP-205ENST00000508692 GOLGA2Q08379 1002 aa10.08□□□□□ -0.8
COL4A3BP-205ENST00000508692 KLHL34Q8N239 644 aa10.08□□□□□ -0.8
COL4A3BP-205ENST00000508692 EMP3P54852 163 aa10.07□□□□□ -0.8
COL4A3BP-205ENST00000508692 GSE1Q14687 1217 aa10.07□□□□□ -0.8
COL4A3BP-205ENST00000508692 L3MBTL3Q96JM7 780 aaPredicted RBP10.06□□□□□ -0.8
COL4A3BP-205ENST00000508692 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.06□□□□□ -0.83e-6■■■□□ 15.8
COL4A3BP-205ENST00000508692 PSEN1P49768 467 aa10.05□□□□□ -0.8
COL4A3BP-205ENST00000508692 VASPP50552 380 aaPredicted RBP10.05□□□□□ -0.8
COL4A3BP-205ENST00000508692 POTEB3A0JP26 581 aa10.04□□□□□ -0.8
COL4A3BP-205ENST00000508692 POTEBQ6S5H4 581 aa10.04□□□□□ -0.8
COL4A3BP-205ENST00000508692 CHRM1P11229 460 aaPredicted RBP10.02□□□□□ -0.81
COL4A3BP-205ENST00000508692 KRTAP3-3Q9BYR6 98 aa10.02□□□□□ -0.81
COL4A3BP-205ENST00000508692 KRTAP3-2Q9BYR7 98 aa10.02□□□□□ -0.81
COL4A3BP-205ENST00000508692 DPY19L2Q6NUT2 758 aa10.01□□□□□ -0.81
COL4A3BP-205ENST00000508692 HS3ST6Q96QI5 342 aa10.01□□□□□ -0.81
COL4A3BP-205ENST00000508692 FAM205CA6NFA0 338 aa10□□□□□ -0.81
COL4A3BP-205ENST00000508692 ILDR1Q86SU0 546 aaPredicted RBP9.98□□□□□ -0.81
COL4A3BP-205ENST00000508692 PDAP1Q13442 181 aaKnown RBP9.96□□□□□ -0.82
COL4A3BP-205ENST00000508692 CABP2Q9NPB3 220 aa9.94□□□□□ -0.82
COL4A3BP-205ENST00000508692 HOXB3P14651 431 aaPredicted RBP9.93□□□□□ -0.82
COL4A3BP-205ENST00000508692 BOLA1Q9Y3E2 137 aa9.92□□□□□ -0.82
COL4A3BP-205ENST00000508692 CIZ1Q9ULV3 898 aaPredicted RBP9.89□□□□□ -0.83
COL4A3BP-205ENST00000508692 G3V3G9 751 aa9.88□□□□□ -0.83
COL4A3BP-205ENST00000508692 AMER1Q5JTC6 1135 aaPredicted RBP9.86□□□□□ -0.83
COL4A3BP-205ENST00000508692 SPOCK2Q92563 424 aa9.86□□□□□ -0.83
COL4A3BP-205ENST00000508692 IFNLR1Q8IU57 520 aaPredicted RBP9.85□□□□□ -0.83
COL4A3BP-205ENST00000508692 HOXB1P14653 301 aaPredicted RBP9.84□□□□□ -0.83
COL4A3BP-205ENST00000508692 ZNF710Q8N1W2 664 aa9.84□□□□□ -0.83
COL4A3BP-205ENST00000508692 ERBB3P21860 1342 aa9.81□□□□□ -0.84
COL4A3BP-205ENST00000508692 DOK7Q18PE1 504 aa9.8□□□□□ -0.84
COL4A3BP-205ENST00000508692 EFCAB3Q8N7B9 438 aa9.79□□□□□ -0.84
COL4A3BP-205ENST00000508692 VARS2Q5ST30 1063 aaKnown RBP9.76□□□□□ -0.85
COL4A3BP-205ENST00000508692 TMEM92Q6UXU6 159 aa9.75□□□□□ -0.85
COL4A3BP-205ENST00000508692 RTN4Q9NQC3 1192 aaKnown RBP9.74□□□□□ -0.85
COL4A3BP-205ENST00000508692 RIMBP2O15034 1052 aa9.73□□□□□ -0.85
COL4A3BP-205ENST00000508692 MICALL2Q8IY33 904 aa9.73□□□□□ -0.85
COL4A3BP-205ENST00000508692 RNF166Q96A37 237 aaPredicted RBP9.73□□□□□ -0.85
COL4A3BP-205ENST00000508692 MYT1LQ9UL68 1186 aa9.68□□□□□ -0.86
COL4A3BP-205ENST00000508692 MS4A4AQ96JQ5 239 aa9.67□□□□□ -0.86
COL4A3BP-205ENST00000508692 GPR153Q6NV75 609 aa9.66□□□□□ -0.86
COL4A3BP-205ENST00000508692 ZNF687Q8N1G0 1237 aa9.66□□□□□ -0.86
COL4A3BP-205ENST00000508692 TRIM41Q8WV44 630 aa9.66□□□□□ -0.86
COL4A3BP-205ENST00000508692 ZSWIM6Q9HCJ5 1215 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms