RNA–Protein interactions for RNA: ENST00000508657.5

KLHL3-209, Transcript of kelch like family member 3, humanhuman

TSL 1 (best) BASIC

Gene KLHL3, Length 6,981 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-209ENST00000508657 PHF23Q9BUL5 403 aaPredicted RBP12.13□□□□□ -0.47
KLHL3-209ENST00000508657 TSPY4P0CV99 314 aa12.12□□□□□ -0.47
KLHL3-209ENST00000508657 TSPY10P0CW01 314 aa12.12□□□□□ -0.47
KLHL3-209ENST00000508657 LAS1LQ9Y4W2 734 aaKnown RBP12.11□□□□□ -0.47
KLHL3-209ENST00000508657 WDR43Q15061 677 aaKnown RBP eCLIP12.1□□□□□ -0.47
KLHL3-209ENST00000508657 ZNF330Q9Y3S2 320 aaPredicted RBP12.07□□□□□ -0.48
KLHL3-209ENST00000508657 GOLGA2Q08379 1002 aa12.06□□□□□ -0.48
KLHL3-209ENST00000508657 MYH16Q9H6N6 1097 aa12.04□□□□□ -0.48
KLHL3-209ENST00000508657 TNNT2P45379 298 aaPredicted RBP12.04□□□□□ -0.48
KLHL3-209ENST00000508657 ANP32BQ92688 251 aaKnown RBP12.04□□□□□ -0.48
KLHL3-209ENST00000508657 HIRIP3Q9BW71 556 aaPredicted RBP12.04□□□□□ -0.48
KLHL3-209ENST00000508657 KLHL34Q8N239 644 aa12.03□□□□□ -0.48
KLHL3-209ENST00000508657 ERCC6Q03468 1493 aa12.03□□□□□ -0.48
KLHL3-209ENST00000508657 UPF2Q9HAU5 1272 aaKnown RBP12.02□□□□□ -0.49
KLHL3-209ENST00000508657 POGKQ9P215 609 aa12.02□□□□□ -0.49
KLHL3-209ENST00000508657 TONSLQ96HA7 1378 aa12.01□□□□□ -0.49
KLHL3-209ENST00000508657 RRP7BPQ9NSQ0 103 aa12.01□□□□□ -0.49
KLHL3-209ENST00000508657 NAP1L2Q9ULW6 460 aaPredicted RBP12□□□□□ -0.49
KLHL3-209ENST00000508657 SAFB2Q14151 953 aaKnown RBP eCLIP12□□□□□ -0.49
KLHL3-209ENST00000508657 PAK3O75914 559 aaPredicted RBP11.99□□□□□ -0.49
KLHL3-209ENST00000508657 NEUROD2Q15784 382 aa11.99□□□□□ -0.49
KLHL3-209ENST00000508657 ANP32AP39687 249 aaKnown RBP11.99□□□□□ -0.49
KLHL3-209ENST00000508657 HNRNPUQ00839 825 aaKnown RBP eCLIP11.97□□□□□ -0.49
KLHL3-209ENST00000508657 MSH5O43196 834 aa11.96□□□□□ -0.49
KLHL3-209ENST00000508657 PRM3Q9NNZ6 103 aa11.96□□□□□ -0.5
KLHL3-209ENST00000508657 CSB-PGBD3P0DP91 1061 aa11.95□□□□□ -0.5
KLHL3-209ENST00000508657 DDX10Q13206 875 aaKnown RBP11.95□□□□□ -0.5
KLHL3-209ENST00000508657 CSRNP3Q8WYN3 585 aa11.94□□□□□ -0.5
KLHL3-209ENST00000508657 ANO8Q9HCE9 1232 aaPredicted RBP11.94□□□□□ -0.5
KLHL3-209ENST00000508657 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.94□□□□□ -0.5
KLHL3-209ENST00000508657 SCRIBQ14160 1630 aa11.94□□□□□ -0.5
KLHL3-209ENST00000508657 OS9Q13438 667 aaPredicted RBP11.93□□□□□ -0.5
KLHL3-209ENST00000508657 PLEKHD1A6NEE1 506 aa11.93□□□□□ -0.5
KLHL3-209ENST00000508657 IRX6P78412 446 aaPredicted RBP11.92□□□□□ -0.5
KLHL3-209ENST00000508657 MEX3CQ5U5Q3 659 aaKnown RBP11.92□□□□□ -0.5
KLHL3-209ENST00000508657 G3V3G9 751 aa11.9□□□□□ -0.5
KLHL3-209ENST00000508657 DCAF8Q5TAQ9 597 aa11.9□□□□□ -0.5
KLHL3-209ENST00000508657 TMX4Q9H1E5 349 aaPredicted RBP11.89□□□□□ -0.51
KLHL3-209ENST00000508657 STK26Q9P289 416 aa11.89□□□□□ -0.51
KLHL3-209ENST00000508657 EIF5BO60841 1220 aaKnown RBP11.89□□□□□ -0.51
KLHL3-209ENST00000508657 MTUS2Q5JR59 1369 aa11.88□□□□□ -0.51
KLHL3-209ENST00000508657 GTF3C3Q9Y5Q9 886 aa11.88□□□□□ -0.51
KLHL3-209ENST00000508657 U2SURPO15042 1029 aaKnown RBP11.87□□□□□ -0.51
KLHL3-209ENST00000508657 KRI1Q8N9T8 703 aaKnown RBP11.87□□□□□ -0.51
KLHL3-209ENST00000508657 NCLP19338 710 aaKnown RBP11.86□□□□□ -0.51
KLHL3-209ENST00000508657 FKBP8Q14318 412 aa11.86□□□□□ -0.51
KLHL3-209ENST00000508657 GGT6Q6P531 493 aa11.86□□□□□ -0.51
KLHL3-209ENST00000508657 FGD1P98174 961 aa11.85□□□□□ -0.51
KLHL3-209ENST00000508657 NBR1Q14596 966 aa11.85□□□□□ -0.51
KLHL3-209ENST00000508657 PDE4CQ08493 712 aa11.84□□□□□ -0.51
KLHL3-209ENST00000508657 ZRSR1Q15695 479 aaKnown RBP11.84□□□□□ -0.51
KLHL3-209ENST00000508657 MRS2Q9HD23 443 aa11.82□□□□□ -0.52
KLHL3-209ENST00000508657 NUTM2FA1L443 756 aa11.82□□□□□ -0.52
KLHL3-209ENST00000508657 CCDC136Q96JN2 1154 aa11.81□□□□□ -0.52
KLHL3-209ENST00000508657 CFAP53Q96M91 514 aa11.81□□□□□ -0.52
KLHL3-209ENST00000508657 SRPK2P78362 688 aaKnown RBP11.81□□□□□ -0.52
KLHL3-209ENST00000508657 MAPK8IP3Q9UPT6 1336 aa11.8□□□□□ -0.52
KLHL3-209ENST00000508657 DCAF8L1A6NGE4 600 aa11.8□□□□□ -0.52
KLHL3-209ENST00000508657 KCNJ4P48050 445 aa11.8□□□□□ -0.52
KLHL3-209ENST00000508657 NUTM2DQ5VT03 806 aaPredicted RBP11.79□□□□□ -0.52
KLHL3-209ENST00000508657 FTSJ3Q8IY81 847 aaKnown RBP11.79□□□□□ -0.52
KLHL3-209ENST00000508657 CFDP1Q9UEE9 299 aaPredicted RBP11.78□□□□□ -0.52
KLHL3-209ENST00000508657 PLCB2Q00722 1185 aa11.76□□□□□ -0.53
KLHL3-209ENST00000508657 CHMP3Q9Y3E7 222 aa11.76□□□□□ -0.53
KLHL3-209ENST00000508657 CC2D1BQ5T0F9 858 aaKnown RBP11.76□□□□□ -0.53
KLHL3-209ENST00000508657 PPP1R1BQ9UD71 204 aaPredicted RBP11.76□□□□□ -0.53
KLHL3-209ENST00000508657 KNSTRNQ9Y448 316 aa11.75□□□□□ -0.53
KLHL3-209ENST00000508657 FRAT1Q92837 279 aaPredicted RBP11.75□□□□□ -0.53
KLHL3-209ENST00000508657 APBB1O00213 710 aa11.74□□□□□ -0.53
KLHL3-209ENST00000508657 LTV1Q96GA3 475 aaPredicted RBP11.74□□□□□ -0.53
KLHL3-209ENST00000508657 FBXO3Q9UK99 471 aa11.73□□□□□ -0.53
KLHL3-209ENST00000508657 GTF2E1P29083 439 aaPredicted RBP11.73□□□□□ -0.53
KLHL3-209ENST00000508657 WWC1Q8IX03 1113 aa11.72□□□□□ -0.53
KLHL3-209ENST00000508657 EIF4G2P78344 907 aaKnown RBP eCLIP11.72□□□□□ -0.53
KLHL3-209ENST00000508657 CASC1Q6TDU7 716 aa11.72□□□□□ -0.53
KLHL3-209ENST00000508657 HDGFP51858 240 aaKnown RBP11.71□□□□□ -0.53
KLHL3-209ENST00000508657 VPS53Q5VIR6 699 aa11.71□□□□□ -0.54
KLHL3-209ENST00000508657 EVA1CP58658 441 aa11.7□□□□□ -0.54
KLHL3-209ENST00000508657 FBXW7Q969H0 707 aa11.7□□□□□ -0.54
KLHL3-209ENST00000508657 RAD21O60216 631 aa11.69□□□□□ -0.54
KLHL3-209ENST00000508657 CARD11Q9BXL7 1154 aa11.69□□□□□ -0.54
KLHL3-209ENST00000508657 RTF1Q92541 710 aaKnown RBP11.69□□□□□ -0.54
KLHL3-209ENST00000508657 NUDCQ9Y266 331 aa11.69□□□□□ -0.54
KLHL3-209ENST00000508657 FRAT2O75474 233 aaPredicted RBP11.68□□□□□ -0.54
KLHL3-209ENST00000508657 CYB5RLQ6IPT4 315 aa11.68□□□□□ -0.54
KLHL3-209ENST00000508657 SYTL4Q96C24 671 aaPredicted RBP11.68□□□□□ -0.54
KLHL3-209ENST00000508657 TAF7LQ5H9L4 462 aa11.67□□□□□ -0.54
KLHL3-209ENST00000508657 EIF4G1Q04637 1599 aaKnown RBP11.67□□□□□ -0.54
KLHL3-209ENST00000508657 SAMD1Q6SPF0 538 aaPredicted RBP11.66□□□□□ -0.54
KLHL3-209ENST00000508657 PTMAP06454 111 aaKnown RBP11.66□□□□□ -0.54
KLHL3-209ENST00000508657 CNKSR2Q8WXI2 1034 aa11.66□□□□□ -0.54
KLHL3-209ENST00000508657 GNL2Q13823 731 aaKnown RBP11.65□□□□□ -0.54
KLHL3-209ENST00000508657 ERICH6BQ5W0A0 696 aa11.65□□□□□ -0.54
KLHL3-209ENST00000508657 CWC22Q9HCG8 908 aaKnown RBP11.65□□□□□ -0.54
KLHL3-209ENST00000508657 GORABQ5T7V8 394 aa11.63□□□□□ -0.55
KLHL3-209ENST00000508657 NGDNQ8NEJ9 315 aaKnown RBP11.61□□□□□ -0.55
KLHL3-209ENST00000508657 DNTTIP2Q5QJE6 756 aaKnown RBP11.61□□□□□ -0.55
KLHL3-209ENST00000508657 EID1Q9Y6B2 187 aa11.6□□□□□ -0.55
KLHL3-209ENST00000508657 RGS3P49796 1198 aa11.6□□□□□ -0.55
KLHL3-209ENST00000508657 NGEFQ8N5V2 710 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms