RNA–Protein interactions for RNA: ENST00000508538.1

CCDC110-207, Transcript of coiled-coil domain containing 110, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC110, Length 467 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC110-207ENST00000508538 CCDC61Q9Y6R9 512 aa15.06■□□□□ 0
CCDC110-207ENST00000508538 ATMINO43313 823 aaPredicted RBP15.05■□□□□ -0
CCDC110-207ENST00000508538 PLEKHG5O94827 1062 aa15.05■□□□□ -0
CCDC110-207ENST00000508538 C7P10643 843 aa15□□□□□ -0.01
CCDC110-207ENST00000508538 SLC39A7Q92504 469 aa15□□□□□ -0.01
CCDC110-207ENST00000508538 KIF12Q96FN5 646 aa15□□□□□ -0.01
CCDC110-207ENST00000508538 METRNQ9UJH8 293 aa15□□□□□ -0.01
CCDC110-207ENST00000508538 ATN1P54259 1190 aaPredicted RBP14.93□□□□□ -0.02
CCDC110-207ENST00000508538 RASEFQ8IZ41 740 aa14.93□□□□□ -0.02
CCDC110-207ENST00000508538 PLCD3Q8N3E9 789 aa14.91□□□□□ -0.02
CCDC110-207ENST00000508538 MAP3K13O43283 966 aa14.9□□□□□ -0.02
CCDC110-207ENST00000508538 POTEJP0CG39 1038 aa14.89□□□□□ -0.03
CCDC110-207ENST00000508538 TRPC6Q9Y210 931 aa14.87□□□□□ -0.03
CCDC110-207ENST00000508538 BMP2KQ9NSY1 1161 aaPredicted RBP14.86□□□□□ -0.03
CCDC110-207ENST00000508538 PLSCR2Q9NRY7 297 aa14.84□□□□□ -0.03
CCDC110-207ENST00000508538 MAMSTRQ6ZN01 415 aa14.83□□□□□ -0.04
CCDC110-207ENST00000508538 TIE1P35590 1138 aa14.81□□□□□ -0.04
CCDC110-207ENST00000508538 ZBTB47Q9UFB7 747 aaPredicted RBP14.79□□□□□ -0.04
CCDC110-207ENST00000508538 POTEMA6NI47 508 aa14.77□□□□□ -0.05
CCDC110-207ENST00000508538 POTEFA5A3E0 1075 aa14.76□□□□□ -0.05
CCDC110-207ENST00000508538 NUBP1P53384 320 aa14.76□□□□□ -0.05
CCDC110-207ENST00000508538 FKBP8Q14318 412 aa14.76□□□□□ -0.05
CCDC110-207ENST00000508538 SGIP1Q9BQI5 828 aa14.74□□□□□ -0.05
CCDC110-207ENST00000508538 SCUBE2Q9NQ36 999 aa14.74□□□□□ -0.05
CCDC110-207ENST00000508538 TTLL13PA6NNM8 815 aa14.73□□□□□ -0.05
CCDC110-207ENST00000508538 POTEGQ6S5H5 508 aa14.73□□□□□ -0.05
CCDC110-207ENST00000508538 PCDHB13Q9Y5F0 798 aa14.72□□□□□ -0.05
CCDC110-207ENST00000508538 SEC24BO95487 1268 aa14.67□□□□□ -0.06
CCDC110-207ENST00000508538 COLQQ9Y215 455 aaPredicted RBP14.66□□□□□ -0.06
CCDC110-207ENST00000508538 FAM212AQ96EL1 285 aa14.65□□□□□ -0.06
CCDC110-207ENST00000508538 FAM163AQ96GL9 167 aaPredicted RBP14.64□□□□□ -0.07
CCDC110-207ENST00000508538 TRIM35Q9UPQ4 493 aa14.64□□□□□ -0.07
CCDC110-207ENST00000508538 IFNL1Q8IU54 200 aa14.63□□□□□ -0.07
CCDC110-207ENST00000508538 IER5LQ5T953 404 aa14.6□□□□□ -0.07
CCDC110-207ENST00000508538 LCE2DQ5TA82 110 aaPredicted RBP14.57□□□□□ -0.08
CCDC110-207ENST00000508538 DCAF8Q5TAQ9 597 aa14.56□□□□□ -0.08
CCDC110-207ENST00000508538 PCDH10Q9P2E7 1040 aa14.56□□□□□ -0.08
CCDC110-207ENST00000508538 TMEM106CQ9BVX2 250 aa14.55□□□□□ -0.08
CCDC110-207ENST00000508538 FBXO3Q9UK99 471 aa14.52□□□□□ -0.09
CCDC110-207ENST00000508538 PYGBP11216 843 aa14.48□□□□□ -0.09
CCDC110-207ENST00000508538 PLCG2P16885 1265 aa14.43□□□□□ -0.1
CCDC110-207ENST00000508538 IRX5P78411 483 aaPredicted RBP14.41□□□□□ -0.1
CCDC110-207ENST00000508538 PCDHB8Q9UN66 801 aa14.41□□□□□ -0.1
CCDC110-207ENST00000508538 SLAIN1Q8ND83 568 aa14.4□□□□□ -0.1
CCDC110-207ENST00000508538 KLHL34Q8N239 644 aa14.38□□□□□ -0.11
CCDC110-207ENST00000508538 OCEL1Q9H607 264 aa14.36□□□□□ -0.11
CCDC110-207ENST00000508538 VASPP50552 380 aaPredicted RBP14.33□□□□□ -0.12
CCDC110-207ENST00000508538 GSE1Q14687 1217 aa14.32□□□□□ -0.12
CCDC110-207ENST00000508538 ST18O60284 1047 aa14.28□□□□□ -0.12
CCDC110-207ENST00000508538 CDAN1Q8IWY9 1227 aa14.26□□□□□ -0.13
CCDC110-207ENST00000508538 ZNF467Q7Z7K2 595 aaPredicted RBP14.25□□□□□ -0.13
CCDC110-207ENST00000508538 CHRM1P11229 460 aaPredicted RBP14.24□□□□□ -0.13
CCDC110-207ENST00000508538 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.22□□□□□ -0.13
CCDC110-207ENST00000508538 GOLGA2Q08379 1002 aa14.18□□□□□ -0.14
CCDC110-207ENST00000508538 MKRN3Q13064 507 aaKnown RBP14.18□□□□□ -0.14
CCDC110-207ENST00000508538 PDCD7Q8N8D1 485 aaKnown RBP14.16□□□□□ -0.14
CCDC110-207ENST00000508538 SNPHO15079 494 aa14.15□□□□□ -0.14
CCDC110-207ENST00000508538 PSEN1P49768 467 aa14.15□□□□□ -0.14
CCDC110-207ENST00000508538 L3MBTL3Q96JM7 780 aaPredicted RBP14.11□□□□□ -0.15
CCDC110-207ENST00000508538 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.11□□□□□ -0.15
CCDC110-207ENST00000508538 SPOCK2Q92563 424 aa14.09□□□□□ -0.15
CCDC110-207ENST00000508538 TMEM121BQ9BXQ6 578 aaPredicted RBP14.09□□□□□ -0.15
CCDC110-207ENST00000508538 IFNLR1Q8IU57 520 aaPredicted RBP14.08□□□□□ -0.16
CCDC110-207ENST00000508538 C3orf67Q6ZVT6 689 aa14.07□□□□□ -0.16
CCDC110-207ENST00000508538 CIZ1Q9ULV3 898 aaPredicted RBP14.07□□□□□ -0.16
CCDC110-207ENST00000508538 PDAP1Q13442 181 aaKnown RBP14.05□□□□□ -0.16
CCDC110-207ENST00000508538 MARVELD3Q96A59 401 aa14.02□□□□□ -0.17
CCDC110-207ENST00000508538 ILDR1Q86SU0 546 aaPredicted RBP14□□□□□ -0.17
CCDC110-207ENST00000508538 DPY19L2Q6NUT2 758 aa13.98□□□□□ -0.17
CCDC110-207ENST00000508538 CABP2Q9NPB3 220 aa13.97□□□□□ -0.17
CCDC110-207ENST00000508538 SPNS2Q8IVW8 549 aa13.91□□□□□ -0.18
CCDC110-207ENST00000508538 EMP3P54852 163 aa13.89□□□□□ -0.19
CCDC110-207ENST00000508538 BOLA1Q9Y3E2 137 aa13.89□□□□□ -0.19
CCDC110-207ENST00000508538 G3V3G9 751 aa13.88□□□□□ -0.19
CCDC110-207ENST00000508538 MMRN1Q13201 1228 aa13.88□□□□□ -0.19
CCDC110-207ENST00000508538 POTEB3A0JP26 581 aa13.82□□□□□ -0.2
CCDC110-207ENST00000508538 FAM205CA6NFA0 338 aa13.82□□□□□ -0.2
CCDC110-207ENST00000508538 POTEBQ6S5H4 581 aa13.82□□□□□ -0.2
CCDC110-207ENST00000508538 TRIM41Q8WV44 630 aa13.82□□□□□ -0.2
CCDC110-207ENST00000508538 HS3ST6Q96QI5 342 aa13.81□□□□□ -0.2
CCDC110-207ENST00000508538 EFCAB3Q8N7B9 438 aa13.79□□□□□ -0.2
CCDC110-207ENST00000508538 HOXB3P14651 431 aaPredicted RBP13.77□□□□□ -0.21
CCDC110-207ENST00000508538 KRTAP3-3Q9BYR6 98 aa13.73□□□□□ -0.21
CCDC110-207ENST00000508538 KRTAP3-2Q9BYR7 98 aa13.73□□□□□ -0.21
CCDC110-207ENST00000508538 ZNF710Q8N1W2 664 aa13.71□□□□□ -0.21
CCDC110-207ENST00000508538 HOXB1P14653 301 aaPredicted RBP13.69□□□□□ -0.22
CCDC110-207ENST00000508538 DOK7Q18PE1 504 aa13.68□□□□□ -0.22
CCDC110-207ENST00000508538 RIOK3O14730 519 aaKnown RBP13.66□□□□□ -0.22
CCDC110-207ENST00000508538 SOX12O15370 315 aa13.65□□□□□ -0.22
CCDC110-207ENST00000508538 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.63□□□□□ -0.23
CCDC110-207ENST00000508538 MICALL2Q8IY33 904 aa13.63□□□□□ -0.23
CCDC110-207ENST00000508538 RNF25Q96BH1 459 aaPredicted RBP13.63□□□□□ -0.23
CCDC110-207ENST00000508538 ZFP91Q96JP5 570 aaPredicted RBP13.63□□□□□ -0.23
CCDC110-207ENST00000508538 ERBB3P21860 1342 aa13.63□□□□□ -0.23
CCDC110-207ENST00000508538 TMEM92Q6UXU6 159 aa13.61□□□□□ -0.23
CCDC110-207ENST00000508538 RIMBP2O15034 1052 aa13.6□□□□□ -0.23
CCDC110-207ENST00000508538 VGFO15240 615 aaPredicted RBP13.6□□□□□ -0.23
CCDC110-207ENST00000508538 MS4A4AQ96JQ5 239 aa13.59□□□□□ -0.23
CCDC110-207ENST00000508538 PHF8Q9UPP1 1060 aa13.58□□□□□ -0.24
CCDC110-207ENST00000508538 ZSWIM6Q9HCJ5 1215 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms