RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 FAM212AQ96EL1 285 aa16.43■□□□□ 0.22
TOPBP1-206ENST00000508524 PHF12Q96QT6 1004 aa16.43■□□□□ 0.22
TOPBP1-206ENST00000508524 GABBR2O75899 941 aa16.4■□□□□ 0.22
TOPBP1-206ENST00000508524 DCAF8Q5TAQ9 597 aa16.34■□□□□ 0.21
TOPBP1-206ENST00000508524 CLCN6P51797 869 aa16.33■□□□□ 0.2
TOPBP1-206ENST00000508524 GSE1Q14687 1217 aa16.29■□□□□ 0.2
TOPBP1-206ENST00000508524 KIF12Q96FN5 646 aa16.29■□□□□ 0.2
TOPBP1-206ENST00000508524 GALR2O43603 387 aaPredicted RBP16.27■□□□□ 0.2
TOPBP1-206ENST00000508524 MAP3K13O43283 966 aa16.23■□□□□ 0.19
TOPBP1-206ENST00000508524 MS4A3Q96HJ5 214 aa16.23■□□□□ 0.19
TOPBP1-206ENST00000508524 CIZ1Q9ULV3 898 aaPredicted RBP16.23■□□□□ 0.19
TOPBP1-206ENST00000508524 PYGBP11216 843 aa16.2■□□□□ 0.18
TOPBP1-206ENST00000508524 SGIP1Q9BQI5 828 aa16.14■□□□□ 0.17
TOPBP1-206ENST00000508524 PCDHB13Q9Y5F0 798 aa16.13■□□□□ 0.17
TOPBP1-206ENST00000508524 CHRM1P11229 460 aaPredicted RBP16.12■□□□□ 0.17
TOPBP1-206ENST00000508524 POTEIP0CG38 1075 aa16.1■□□□□ 0.17
TOPBP1-206ENST00000508524 IFNL1Q8IU54 200 aa16.09■□□□□ 0.17
TOPBP1-206ENST00000508524 TRPC6Q9Y210 931 aa16.08■□□□□ 0.16
TOPBP1-206ENST00000508524 TRIM41Q8WV44 630 aa16.06■□□□□ 0.16
TOPBP1-206ENST00000508524 DCBLD2Q96PD2 775 aa16.06■□□□□ 0.16
TOPBP1-206ENST00000508524 PKD2Q13563 968 aa16.01■□□□□ 0.15
TOPBP1-206ENST00000508524 PCDHB8Q9UN66 801 aa16.01■□□□□ 0.15
TOPBP1-206ENST00000508524 ZNF467Q7Z7K2 595 aaPredicted RBP15.98■□□□□ 0.15
TOPBP1-206ENST00000508524 TIE1P35590 1138 aa15.97■□□□□ 0.15
TOPBP1-206ENST00000508524 ASTLQ6HA08 431 aaPredicted RBP15.97■□□□□ 0.15
TOPBP1-206ENST00000508524 BMP2KQ9NSY1 1161 aaPredicted RBP15.97■□□□□ 0.15
TOPBP1-206ENST00000508524 ATMINO43313 823 aaPredicted RBP15.96■□□□□ 0.15
TOPBP1-206ENST00000508524 RNF25Q96BH1 459 aaPredicted RBP15.92■□□□□ 0.14
TOPBP1-206ENST00000508524 TTLL13PA6NNM8 815 aa15.91■□□□□ 0.14
TOPBP1-206ENST00000508524 PELP1Q8IZL8 1130 aaKnown RBP15.91■□□□□ 0.14
TOPBP1-206ENST00000508524 ECM2O94769 699 aaPredicted RBP15.9■□□□□ 0.14
TOPBP1-206ENST00000508524 ATN1P54259 1190 aaPredicted RBP15.9■□□□□ 0.14
TOPBP1-206ENST00000508524 TMEM106CQ9BVX2 250 aa15.87■□□□□ 0.13
TOPBP1-206ENST00000508524 RIOK3O14730 519 aaKnown RBP15.83■□□□□ 0.12
TOPBP1-206ENST00000508524 PSEN1P49768 467 aa15.83■□□□□ 0.12
TOPBP1-206ENST00000508524 PDAP1Q13442 181 aaKnown RBP15.83■□□□□ 0.12
TOPBP1-206ENST00000508524 RGL2O15211 777 aa15.8■□□□□ 0.12
TOPBP1-206ENST00000508524 TRIM35Q9UPQ4 493 aa15.8■□□□□ 0.12
TOPBP1-206ENST00000508524 SLC39A7Q92504 469 aa15.75■□□□□ 0.11
TOPBP1-206ENST00000508524 VGFO15240 615 aaPredicted RBP15.74■□□□□ 0.11
TOPBP1-206ENST00000508524 METRNQ9UJH8 293 aa15.73■□□□□ 0.11
TOPBP1-206ENST00000508524 C7P10643 843 aa15.72■□□□□ 0.11
TOPBP1-206ENST00000508524 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.69■□□□□ 0.1
TOPBP1-206ENST00000508524 ZFP91Q96JP5 570 aaPredicted RBP15.69■□□□□ 0.1
TOPBP1-206ENST00000508524 IER5LQ5T953 404 aa15.68■□□□□ 0.1
TOPBP1-206ENST00000508524 POTEFA5A3E0 1075 aa15.65■□□□□ 0.1
TOPBP1-206ENST00000508524 AMER1Q5JTC6 1135 aaPredicted RBP15.64■□□□□ 0.09
TOPBP1-206ENST00000508524 TAOK2Q9UL54 1235 aa15.64■□□□□ 0.09
TOPBP1-206ENST00000508524 CABP2Q9NPB3 220 aa15.63■□□□□ 0.09
TOPBP1-206ENST00000508524 RTN4Q9NQC3 1192 aaKnown RBP15.63■□□□□ 0.09
TOPBP1-206ENST00000508524 COLQQ9Y215 455 aaPredicted RBP15.61■□□□□ 0.09
TOPBP1-206ENST00000508524 IRX5P78411 483 aaPredicted RBP15.59■□□□□ 0.09
TOPBP1-206ENST00000508524 GOLGA2Q08379 1002 aa15.59■□□□□ 0.09
TOPBP1-206ENST00000508524 POTEB2H3BUK9 544 aa15.58■□□□□ 0.08
TOPBP1-206ENST00000508524 LHX8Q68G74 356 aa15.58■□□□□ 0.08
TOPBP1-206ENST00000508524 BCL11BQ9C0K0 894 aaPredicted RBP15.58■□□□□ 0.08
TOPBP1-206ENST00000508524 MKRN3Q13064 507 aaKnown RBP15.57■□□□□ 0.08
TOPBP1-206ENST00000508524 STK25O00506 426 aa15.55■□□□□ 0.08
TOPBP1-206ENST00000508524 SEC24BO95487 1268 aa15.55■□□□□ 0.08
TOPBP1-206ENST00000508524 EFCAB3Q8N7B9 438 aa15.53■□□□□ 0.08
TOPBP1-206ENST00000508524 STK24Q9Y6E0 443 aa15.53■□□□□ 0.08
TOPBP1-206ENST00000508524 PLCG2P16885 1265 aa15.51■□□□□ 0.07
TOPBP1-206ENST00000508524 OCEL1Q9H607 264 aa15.51■□□□□ 0.07
TOPBP1-206ENST00000508524 ILDR1Q86SU0 546 aaPredicted RBP15.5■□□□□ 0.07
TOPBP1-206ENST00000508524 POTEJP0CG39 1038 aa15.48■□□□□ 0.07
TOPBP1-206ENST00000508524 PDCD7Q8N8D1 485 aaKnown RBP15.48■□□□□ 0.07
TOPBP1-206ENST00000508524 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.48■□□□□ 0.072e-6■■■□□ 14.6
TOPBP1-206ENST00000508524 HS6ST3Q8IZP7 471 aa15.46■□□□□ 0.07
TOPBP1-206ENST00000508524 CHGAP10645 457 aaKnown RBP15.42■□□□□ 0.06
TOPBP1-206ENST00000508524 SOX12O15370 315 aa15.41■□□□□ 0.06
TOPBP1-206ENST00000508524 DCAF8L2P0C7V8 631 aa15.38■□□□□ 0.05
TOPBP1-206ENST00000508524 PHF8Q9UPP1 1060 aa15.38■□□□□ 0.05
TOPBP1-206ENST00000508524 DPY19L2Q6NUT2 758 aa15.36■□□□□ 0.05
TOPBP1-206ENST00000508524 OTUD5Q96G74 571 aa15.36■□□□□ 0.05
TOPBP1-206ENST00000508524 MS4A4AQ96JQ5 239 aa15.35■□□□□ 0.05
TOPBP1-206ENST00000508524 MFRPQ9BY79 579 aa15.35■□□□□ 0.05
TOPBP1-206ENST00000508524 FBXO22Q8NEZ5 403 aa15.34■□□□□ 0.05
TOPBP1-206ENST00000508524 DNAJC5Q9H3Z4 198 aa15.32■□□□□ 0.04
TOPBP1-206ENST00000508524 NLRP6P59044 892 aa15.3■□□□□ 0.04
TOPBP1-206ENST00000508524 MAMSTRQ6ZN01 415 aa15.3■□□□□ 0.04
TOPBP1-206ENST00000508524 NKX1-1Q15270 411 aaPredicted RBP15.27■□□□□ 0.04
TOPBP1-206ENST00000508524 L3MBTL3Q96JM7 780 aaPredicted RBP15.27■□□□□ 0.04
TOPBP1-206ENST00000508524 SCUBE2Q9NQ36 999 aa15.27■□□□□ 0.04
TOPBP1-206ENST00000508524 BOLA1Q9Y3E2 137 aa15.22■□□□□ 0.03
TOPBP1-206ENST00000508524 TMEM121BQ9BXQ6 578 aaPredicted RBP15.19■□□□□ 0.02
TOPBP1-206ENST00000508524 MICALL2Q8IY33 904 aa15.16■□□□□ 0.02
TOPBP1-206ENST00000508524 G3V3G9 751 aa15.15■□□□□ 0.02
TOPBP1-206ENST00000508524 C3orf67Q6ZVT6 689 aa15.15■□□□□ 0.02
TOPBP1-206ENST00000508524 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.14■□□□□ 0.01
TOPBP1-206ENST00000508524 PPP1R37O75864 691 aa15.12■□□□□ 0.01
TOPBP1-206ENST00000508524 SLAIN1Q8ND83 568 aa15.11■□□□□ 0.01
TOPBP1-206ENST00000508524 GTPBP6O43824 516 aaPredicted RBP15.08■□□□□ 0
TOPBP1-206ENST00000508524 BBXQ8WY36 941 aaPredicted RBP15.07■□□□□ 0
TOPBP1-206ENST00000508524 RYDENQ9NUL5 291 aaKnown RBP15.06■□□□□ 0
TOPBP1-206ENST00000508524 TMEM92Q6UXU6 159 aa15.02■□□□□ -0
TOPBP1-206ENST00000508524 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.91□□□□□ -0.02
TOPBP1-206ENST00000508524 KIF3CO14782 793 aa14.89□□□□□ -0.03
TOPBP1-206ENST00000508524 SPRYD3Q8NCJ5 442 aa14.87□□□□□ -0.03
TOPBP1-206ENST00000508524 C2orf72A6NCS6 295 aa14.86□□□□□ -0.03
TOPBP1-206ENST00000508524 LCE2DQ5TA82 110 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms