RNA–Protein interactions for RNA: ENST00000508169.1

COL6A4P1-204, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 3

Gene COL6A4P1, Length 527 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-204ENST00000508169 RNF25Q96BH1 459 aaPredicted RBP15.84■□□□□ 0.13
COL6A4P1-204ENST00000508169 RASEFQ8IZ41 740 aa15.83■□□□□ 0.12
COL6A4P1-204ENST00000508169 CFAP44Q96MT7 982 aa15.82■□□□□ 0.12
COL6A4P1-204ENST00000508169 HS6ST3Q8IZP7 471 aa15.78■□□□□ 0.12
COL6A4P1-204ENST00000508169 RIOK3O14730 519 aaKnown RBP15.77■□□□□ 0.12
COL6A4P1-204ENST00000508169 SPRYD3Q8NCJ5 442 aa15.76■□□□□ 0.11
COL6A4P1-204ENST00000508169 TAOK2Q9UL54 1235 aa15.76■□□□□ 0.11
COL6A4P1-204ENST00000508169 CHADLQ6NUI6 762 aa15.75■□□□□ 0.11
COL6A4P1-204ENST00000508169 CHRM1P11229 460 aaPredicted RBP15.74■□□□□ 0.11
COL6A4P1-204ENST00000508169 VSIG10Q8N0Z9 540 aa15.74■□□□□ 0.11
COL6A4P1-204ENST00000508169 VGFO15240 615 aaPredicted RBP15.66■□□□□ 0.1
COL6A4P1-204ENST00000508169 PYGBP11216 843 aa15.66■□□□□ 0.1
COL6A4P1-204ENST00000508169 FARP1Q9Y4F1 1045 aaPredicted RBP15.66■□□□□ 0.1
COL6A4P1-204ENST00000508169 DNAJC5Q9H3Z4 198 aa15.65■□□□□ 0.1
COL6A4P1-204ENST00000508169 PRKAR2AP13861 404 aaKnown RBP15.63■□□□□ 0.09
COL6A4P1-204ENST00000508169 STK25O00506 426 aa15.6■□□□□ 0.09
COL6A4P1-204ENST00000508169 FXR2P51116 673 aaKnown RBP eCLIP15.59■□□□□ 0.09
COL6A4P1-204ENST00000508169 TSPYL2Q9H2G4 693 aaPredicted RBP15.59■□□□□ 0.09
COL6A4P1-204ENST00000508169 SGIP1Q9BQI5 828 aa15.57■□□□□ 0.08
COL6A4P1-204ENST00000508169 TSHZ2Q9NRE2 1034 aa15.56■□□□□ 0.08
COL6A4P1-204ENST00000508169 KDM2AQ9Y2K7 1162 aa15.56■□□□□ 0.08
COL6A4P1-204ENST00000508169 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.53■□□□□ 0.08
COL6A4P1-204ENST00000508169 NKX1-1Q15270 411 aaPredicted RBP15.53■□□□□ 0.08
COL6A4P1-204ENST00000508169 ZFP91Q96JP5 570 aaPredicted RBP15.53■□□□□ 0.08
COL6A4P1-204ENST00000508169 CHRDL2Q6WN34 429 aa15.51■□□□□ 0.07
COL6A4P1-204ENST00000508169 BCL11BQ9C0K0 894 aaPredicted RBP15.5■□□□□ 0.07
COL6A4P1-204ENST00000508169 STK24Q9Y6E0 443 aa15.5■□□□□ 0.07
COL6A4P1-204ENST00000508169 ZNF467Q7Z7K2 595 aaPredicted RBP15.48■□□□□ 0.07
COL6A4P1-204ENST00000508169 BCANQ96GW7 911 aa15.48■□□□□ 0.07
COL6A4P1-204ENST00000508169 PIP4P2Q8N4L2 257 aa15.45■□□□□ 0.06
COL6A4P1-204ENST00000508169 CCDC61Q9Y6R9 512 aa15.45■□□□□ 0.06
COL6A4P1-204ENST00000508169 GTPBP6O43824 516 aaPredicted RBP15.44■□□□□ 0.06
COL6A4P1-204ENST00000508169 PAK3O75914 559 aaPredicted RBP15.42■□□□□ 0.06
COL6A4P1-204ENST00000508169 PDAP1Q13442 181 aaKnown RBP15.38■□□□□ 0.05
COL6A4P1-204ENST00000508169 RYDENQ9NUL5 291 aaKnown RBP15.37■□□□□ 0.05
COL6A4P1-204ENST00000508169 PCDHB8Q9UN66 801 aa15.36■□□□□ 0.05
COL6A4P1-204ENST00000508169 PCDHB13Q9Y5F0 798 aa15.36■□□□□ 0.05
COL6A4P1-204ENST00000508169 ZNF579Q8NAF0 562 aaKnown RBP15.34■□□□□ 0.05
COL6A4P1-204ENST00000508169 PSEN1P49768 467 aa15.28■□□□□ 0.04
COL6A4P1-204ENST00000508169 KIF12Q96FN5 646 aa15.25■□□□□ 0.03
COL6A4P1-204ENST00000508169 MAP3K13O43283 966 aa15.24■□□□□ 0.03
COL6A4P1-204ENST00000508169 IFNL1Q8IU54 200 aa15.24■□□□□ 0.03
COL6A4P1-204ENST00000508169 ZRANB1Q9UGI0 708 aa15.23■□□□□ 0.03
COL6A4P1-204ENST00000508169 CD44P16070 742 aaKnown RBP15.22■□□□□ 0.03
COL6A4P1-204ENST00000508169 PHF12Q96QT6 1004 aa15.13■□□□□ 0.01
COL6A4P1-204ENST00000508169 MFRPQ9BY79 579 aa15.12■□□□□ 0.01
COL6A4P1-204ENST00000508169 CABP2Q9NPB3 220 aa15.1■□□□□ 0.01
COL6A4P1-204ENST00000508169 NBR1Q14596 966 aa15.09■□□□□ 0.01
COL6A4P1-204ENST00000508169 EFCAB3Q8N7B9 438 aa15.07■□□□□ 0
COL6A4P1-204ENST00000508169 C19orf67A6NJJ6 358 aa15.04■□□□□ -0
COL6A4P1-204ENST00000508169 SOX12O15370 315 aa15.04■□□□□ -0
COL6A4P1-204ENST00000508169 NLRP6P59044 892 aa15.03■□□□□ -0
COL6A4P1-204ENST00000508169 PRKCSHP14314 528 aaPredicted RBP15.01□□□□□ -0.01
COL6A4P1-204ENST00000508169 FBXO22Q8NEZ5 403 aa15□□□□□ -0.01
COL6A4P1-204ENST00000508169 CADPS2Q86UW7 1296 aa14.99□□□□□ -0.01
COL6A4P1-204ENST00000508169 PHF8Q9UPP1 1060 aa14.99□□□□□ -0.01
COL6A4P1-204ENST00000508169 MS4A3Q96HJ5 214 aa14.97□□□□□ -0.01
COL6A4P1-204ENST00000508169 TPRNQ4KMQ1 711 aa14.96□□□□□ -0.01
COL6A4P1-204ENST00000508169 TMEM106CQ9BVX2 250 aa14.95□□□□□ -0.02
COL6A4P1-204ENST00000508169 PPP1R37O75864 691 aa14.94□□□□□ -0.02
COL6A4P1-204ENST00000508169 GOLGA2Q08379 1002 aa14.94□□□□□ -0.02
COL6A4P1-204ENST00000508169 WDR70Q9NW82 654 aa14.94□□□□□ -0.02
COL6A4P1-204ENST00000508169 P3H3Q8IVL6 736 aa14.92□□□□□ -0.02
COL6A4P1-204ENST00000508169 TRPC6Q9Y210 931 aa14.92□□□□□ -0.02
COL6A4P1-204ENST00000508169 TIE1P35590 1138 aa14.85□□□□□ -0.03
COL6A4P1-204ENST00000508169 MKRN3Q13064 507 aaKnown RBP14.85□□□□□ -0.03
COL6A4P1-204ENST00000508169 MS4A4AQ96JQ5 239 aa14.84□□□□□ -0.03
COL6A4P1-204ENST00000508169 KCNV2Q8TDN2 545 aa14.82□□□□□ -0.04
COL6A4P1-204ENST00000508169 TTLL13PA6NNM8 815 aa14.8□□□□□ -0.04
COL6A4P1-204ENST00000508169 HAX1O00165 279 aa14.79□□□□□ -0.04
COL6A4P1-204ENST00000508169 BMP2KQ9NSY1 1161 aaPredicted RBP14.77□□□□□ -0.05
COL6A4P1-204ENST00000508169 GALR2O43603 387 aaPredicted RBP14.75□□□□□ -0.05
COL6A4P1-204ENST00000508169 CLCN6P51797 869 aa14.74□□□□□ -0.05
COL6A4P1-204ENST00000508169 TRIM35Q9UPQ4 493 aa14.71□□□□□ -0.05
COL6A4P1-204ENST00000508169 NCKAP5LQ9HCH0 1330 aa14.7□□□□□ -0.06
COL6A4P1-204ENST00000508169 PDE4AP27815 886 aa14.7□□□□□ -0.06
COL6A4P1-204ENST00000508169 E2F4Q16254 413 aa14.7□□□□□ -0.06
COL6A4P1-204ENST00000508169 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.7□□□□□ -0.06
COL6A4P1-204ENST00000508169 EVX2Q03828 476 aa14.69□□□□□ -0.06
COL6A4P1-204ENST00000508169 ILDR1Q86SU0 546 aaPredicted RBP14.68□□□□□ -0.06
COL6A4P1-204ENST00000508169 LARP6Q9BRS8 491 aaKnown RBP14.67□□□□□ -0.06
COL6A4P1-204ENST00000508169 ARHGEF1Q92888 912 aaKnown RBP14.66□□□□□ -0.06
COL6A4P1-204ENST00000508169 CRISPLD2Q9H0B8 497 aa14.66□□□□□ -0.06
COL6A4P1-204ENST00000508169 MFSD10Q14728 455 aa14.64□□□□□ -0.07
COL6A4P1-204ENST00000508169 DDX27Q96GQ7 796 aaKnown RBP14.61□□□□□ -0.07
COL6A4P1-204ENST00000508169 ATN1P54259 1190 aaPredicted RBP14.59□□□□□ -0.07
COL6A4P1-204ENST00000508169 ATMINO43313 823 aaPredicted RBP14.56□□□□□ -0.08
COL6A4P1-204ENST00000508169 ASTLQ6HA08 431 aaPredicted RBP14.55□□□□□ -0.08
COL6A4P1-204ENST00000508169 DPY19L2Q6NUT2 758 aa14.55□□□□□ -0.08
COL6A4P1-204ENST00000508169 TULP1O00294 542 aaPredicted RBP14.53□□□□□ -0.08
COL6A4P1-204ENST00000508169 LMOD2Q6P5Q4 547 aa14.53□□□□□ -0.08
COL6A4P1-204ENST00000508169 PDCD7Q8N8D1 485 aaKnown RBP14.53□□□□□ -0.08
COL6A4P1-204ENST00000508169 IER5LQ5T953 404 aa14.52□□□□□ -0.09
COL6A4P1-204ENST00000508169 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.52□□□□□ -0.09
COL6A4P1-204ENST00000508169 MICALL2Q8IY33 904 aa14.51□□□□□ -0.09
COL6A4P1-204ENST00000508169 GPHNQ9NQX3 736 aaPredicted RBP14.51□□□□□ -0.09
COL6A4P1-204ENST00000508169 IRX5P78411 483 aaPredicted RBP14.5□□□□□ -0.09
COL6A4P1-204ENST00000508169 CAMK2BQ13554 666 aa14.5□□□□□ -0.09
COL6A4P1-204ENST00000508169 OCEL1Q9H607 264 aa14.49□□□□□ -0.09
COL6A4P1-204ENST00000508169 SEMA3EO15041 775 aa14.48□□□□□ -0.09
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