RNA–Protein interactions for RNA: ENST00000508086.1

CCSER1-206, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 3

Gene CCSER1, Length 518 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-206ENST00000508086 SLC39A7Q92504 469 aa15.42■□□□□ 0.06
CCSER1-206ENST00000508086 C7P10643 843 aa15.4■□□□□ 0.06
CCSER1-206ENST00000508086 ASTLQ6HA08 431 aaPredicted RBP15.4■□□□□ 0.06
CCSER1-206ENST00000508086 ATMINO43313 823 aaPredicted RBP15.39■□□□□ 0.05
CCSER1-206ENST00000508086 MIER1Q8N108 512 aa15.38■□□□□ 0.05
CCSER1-206ENST00000508086 PROM2Q8N271 834 aa15.33■□□□□ 0.04
CCSER1-206ENST00000508086 MAMSTRQ6ZN01 415 aa15.32■□□□□ 0.04
CCSER1-206ENST00000508086 POTEMA6NI47 508 aa15.31■□□□□ 0.04
CCSER1-206ENST00000508086 CCDC61Q9Y6R9 512 aa15.31■□□□□ 0.04
CCSER1-206ENST00000508086 ATN1P54259 1190 aaPredicted RBP15.27■□□□□ 0.04
CCSER1-206ENST00000508086 POTEGQ6S5H5 508 aa15.27■□□□□ 0.04
CCSER1-206ENST00000508086 KIF12Q96FN5 646 aa15.27■□□□□ 0.04
CCSER1-206ENST00000508086 PLCD3Q8N3E9 789 aa15.24■□□□□ 0.03
CCSER1-206ENST00000508086 SCUBE2Q9NQ36 999 aa15.24■□□□□ 0.03
CCSER1-206ENST00000508086 MAP3K13O43283 966 aa15.2■□□□□ 0.02
CCSER1-206ENST00000508086 RASEFQ8IZ41 740 aa15.18■□□□□ 0.02
CCSER1-206ENST00000508086 BMP2KQ9NSY1 1161 aaPredicted RBP15.18■□□□□ 0.02
CCSER1-206ENST00000508086 POTEJP0CG39 1038 aa15.17■□□□□ 0.02
CCSER1-206ENST00000508086 FAM163AQ96GL9 167 aaPredicted RBP15.16■□□□□ 0.02
CCSER1-206ENST00000508086 SEC24BO95487 1268 aa15.15■□□□□ 0.02
CCSER1-206ENST00000508086 TRPC6Q9Y210 931 aa15.14■□□□□ 0.01
CCSER1-206ENST00000508086 TIE1P35590 1138 aa15.13■□□□□ 0.01
CCSER1-206ENST00000508086 ZBTB47Q9UFB7 747 aaPredicted RBP15.11■□□□□ 0.01
CCSER1-206ENST00000508086 PCDH10Q9P2E7 1040 aa15.06■□□□□ 0
CCSER1-206ENST00000508086 PCDHB13Q9Y5F0 798 aa15.06■□□□□ 0
CCSER1-206ENST00000508086 TTLL13PA6NNM8 815 aa15.04■□□□□ -0
CCSER1-206ENST00000508086 POTEFA5A3E0 1075 aa15□□□□□ -0.01
CCSER1-206ENST00000508086 TRIM35Q9UPQ4 493 aa14.99□□□□□ -0.01
CCSER1-206ENST00000508086 FAM212AQ96EL1 285 aa14.98□□□□□ -0.01
CCSER1-206ENST00000508086 SGIP1Q9BQI5 828 aa14.98□□□□□ -0.01
CCSER1-206ENST00000508086 COLQQ9Y215 455 aaPredicted RBP14.97□□□□□ -0.01
CCSER1-206ENST00000508086 NUBP1P53384 320 aa14.92□□□□□ -0.02
CCSER1-206ENST00000508086 IER5LQ5T953 404 aa14.92□□□□□ -0.02
CCSER1-206ENST00000508086 FKBP8Q14318 412 aa14.9□□□□□ -0.02
CCSER1-206ENST00000508086 TMEM106CQ9BVX2 250 aa14.9□□□□□ -0.02
CCSER1-206ENST00000508086 IFNL1Q8IU54 200 aa14.89□□□□□ -0.03
CCSER1-206ENST00000508086 LCE2DQ5TA82 110 aaPredicted RBP14.88□□□□□ -0.03
CCSER1-206ENST00000508086 PLCG2P16885 1265 aa14.86□□□□□ -0.03
CCSER1-206ENST00000508086 DCAF8Q5TAQ9 597 aa14.86□□□□□ -0.03
CCSER1-206ENST00000508086 SLAIN1Q8ND83 568 aa14.84□□□□□ -0.03
CCSER1-206ENST00000508086 PYGBP11216 843 aa14.77□□□□□ -0.05
CCSER1-206ENST00000508086 CDAN1Q8IWY9 1227 aa14.74□□□□□ -0.05
CCSER1-206ENST00000508086 FBXO3Q9UK99 471 aa14.72□□□□□ -0.05
CCSER1-206ENST00000508086 KLHL34Q8N239 644 aa14.68□□□□□ -0.06
CCSER1-206ENST00000508086 OCEL1Q9H607 264 aa14.68□□□□□ -0.06
CCSER1-206ENST00000508086 ST18O60284 1047 aa14.67□□□□□ -0.06
CCSER1-206ENST00000508086 PCDHB8Q9UN66 801 aa14.67□□□□□ -0.06
CCSER1-206ENST00000508086 IRX5P78411 483 aaPredicted RBP14.66□□□□□ -0.06
CCSER1-206ENST00000508086 GOLGA2Q08379 1002 aa14.63□□□□□ -0.07
CCSER1-206ENST00000508086 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.63□□□□□ -0.07
CCSER1-206ENST00000508086 SNPHO15079 494 aa14.6□□□□□ -0.07
CCSER1-206ENST00000508086 GSE1Q14687 1217 aa14.57□□□□□ -0.08
CCSER1-206ENST00000508086 MKRN3Q13064 507 aaKnown RBP14.55□□□□□ -0.08
CCSER1-206ENST00000508086 ZNF467Q7Z7K2 595 aaPredicted RBP14.53□□□□□ -0.08
CCSER1-206ENST00000508086 C3orf67Q6ZVT6 689 aa14.52□□□□□ -0.09
CCSER1-206ENST00000508086 TMEM121BQ9BXQ6 578 aaPredicted RBP14.5□□□□□ -0.09
CCSER1-206ENST00000508086 VASPP50552 380 aaPredicted RBP14.47□□□□□ -0.09
CCSER1-206ENST00000508086 L3MBTL3Q96JM7 780 aaPredicted RBP14.47□□□□□ -0.09
CCSER1-206ENST00000508086 MARVELD3Q96A59 401 aa14.46□□□□□ -0.09
CCSER1-206ENST00000508086 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.43□□□□□ -0.1
CCSER1-206ENST00000508086 PSEN1P49768 467 aa14.41□□□□□ -0.1
CCSER1-206ENST00000508086 PDCD7Q8N8D1 485 aaKnown RBP14.39□□□□□ -0.11
CCSER1-206ENST00000508086 G3V3G9 751 aa14.37□□□□□ -0.11
CCSER1-206ENST00000508086 CHRM1P11229 460 aaPredicted RBP14.36□□□□□ -0.11
CCSER1-206ENST00000508086 EMP3P54852 163 aa14.36□□□□□ -0.11
CCSER1-206ENST00000508086 CIZ1Q9ULV3 898 aaPredicted RBP14.35□□□□□ -0.11
CCSER1-206ENST00000508086 SPNS2Q8IVW8 549 aa14.34□□□□□ -0.11
CCSER1-206ENST00000508086 MMRN1Q13201 1228 aa14.33□□□□□ -0.12
CCSER1-206ENST00000508086 PDAP1Q13442 181 aaKnown RBP14.31□□□□□ -0.12
CCSER1-206ENST00000508086 CABP2Q9NPB3 220 aa14.27□□□□□ -0.13
CCSER1-206ENST00000508086 SPOCK2Q92563 424 aa14.26□□□□□ -0.13
CCSER1-206ENST00000508086 FAM205CA6NFA0 338 aa14.25□□□□□ -0.13
CCSER1-206ENST00000508086 DPY19L2Q6NUT2 758 aa14.22□□□□□ -0.13
CCSER1-206ENST00000508086 HS3ST6Q96QI5 342 aa14.2□□□□□ -0.14
CCSER1-206ENST00000508086 BOLA1Q9Y3E2 137 aa14.19□□□□□ -0.14
CCSER1-206ENST00000508086 ZNF710Q8N1W2 664 aa14.17□□□□□ -0.14
CCSER1-206ENST00000508086 IFNLR1Q8IU57 520 aaPredicted RBP14.14□□□□□ -0.15
CCSER1-206ENST00000508086 ILDR1Q86SU0 546 aaPredicted RBP14.09□□□□□ -0.15
CCSER1-206ENST00000508086 POTEB3A0JP26 581 aa14.08□□□□□ -0.16
CCSER1-206ENST00000508086 POTEBQ6S5H4 581 aa14.08□□□□□ -0.16
CCSER1-206ENST00000508086 DOK7Q18PE1 504 aa14.07□□□□□ -0.16
CCSER1-206ENST00000508086 KRTAP3-3Q9BYR6 98 aa14.06□□□□□ -0.16
CCSER1-206ENST00000508086 KRTAP3-2Q9BYR7 98 aa14.06□□□□□ -0.16
CCSER1-206ENST00000508086 ERBB3P21860 1342 aa14.05□□□□□ -0.16
CCSER1-206ENST00000508086 RIMBP2O15034 1052 aa14.03□□□□□ -0.16
CCSER1-206ENST00000508086 EFCAB3Q8N7B9 438 aa14.02□□□□□ -0.17
CCSER1-206ENST00000508086 HOXB3P14651 431 aaPredicted RBP14.01□□□□□ -0.17
CCSER1-206ENST00000508086 TRIM41Q8WV44 630 aa14.01□□□□□ -0.17
CCSER1-206ENST00000508086 HOXB1P14653 301 aaPredicted RBP13.99□□□□□ -0.17
CCSER1-206ENST00000508086 VARS2Q5ST30 1063 aaKnown RBP13.91□□□□□ -0.18
CCSER1-206ENST00000508086 MICALL2Q8IY33 904 aa13.88□□□□□ -0.19
CCSER1-206ENST00000508086 SOX12O15370 315 aa13.86□□□□□ -0.19
CCSER1-206ENST00000508086 RIOK3O14730 519 aaKnown RBP13.85□□□□□ -0.19
CCSER1-206ENST00000508086 RNF166Q96A37 237 aaPredicted RBP13.84□□□□□ -0.19
CCSER1-206ENST00000508086 ZSWIM6Q9HCJ5 1215 aa13.82□□□□□ -0.2
CCSER1-206ENST00000508086 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.8□□□□□ -0.2
CCSER1-206ENST00000508086 ZFP91Q96JP5 570 aaPredicted RBP13.8□□□□□ -0.2
CCSER1-206ENST00000508086 VGFO15240 615 aaPredicted RBP13.79□□□□□ -0.2
CCSER1-206ENST00000508086 MYT1LQ9UL68 1186 aa13.79□□□□□ -0.2
CCSER1-206ENST00000508086 PHF8Q9UPP1 1060 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms