RNA–Protein interactions for RNA: ENST00000507965.5

ATXN3-210, Transcript of ataxin 3, human

TSL 2

Gene ATXN3, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-210	ENST00000507965	PROM2	Q8N271	834 aa		11.91	□□□□□ -0.5
ATXN3-210	ENST00000507965	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.91	□□□□□ -0.5
ATXN3-210	ENST00000507965	POTEB2	H3BUK9	544 aa		11.9	□□□□□ -0.5
ATXN3-210	ENST00000507965	PELP1	Q8IZL8	1130 aa	Known RBP	11.9	□□□□□ -0.5
ATXN3-210	ENST00000507965	BICRA	Q9NZM4	1560 aa		11.87	□□□□□ -0.51
ATXN3-210	ENST00000507965	PLEKHG5	O94827	1062 aa		11.86	□□□□□ -0.51
ATXN3-210	ENST00000507965	ASTL	Q6HA08	431 aa	Predicted RBP	11.86	□□□□□ -0.51
ATXN3-210	ENST00000507965	METRN	Q9UJH8	293 aa		11.85	□□□□□ -0.51
ATXN3-210	ENST00000507965	ATMIN	O43313	823 aa	Predicted RBP	11.84	□□□□□ -0.51
ATXN3-210	ENST00000507965	DCAF8L2	P0C7V8	631 aa		11.84	□□□□□ -0.51
ATXN3-210	ENST00000507965	PLSCR2	Q9NRY7	297 aa		11.84	□□□□□ -0.51
ATXN3-210	ENST00000507965	MYO15B	Q96JP2	1530 aa		11.83	□□□□□ -0.52
ATXN3-210	ENST00000507965	SLC39A7	Q92504	469 aa		11.83	□□□□□ -0.52
ATXN3-210	ENST00000507965	C7	P10643	843 aa		11.82	□□□□□ -0.52
ATXN3-210	ENST00000507965	MIER1	Q8N108	512 aa		11.81	□□□□□ -0.52
ATXN3-210	ENST00000507965	CCDC61	Q9Y6R9	512 aa		11.81	□□□□□ -0.52
ATXN3-210	ENST00000507965	KIF12	Q96FN5	646 aa		11.76	□□□□□ -0.53
ATXN3-210	ENST00000507965	ZCCHC6	Q5VYS8	1495 aa	Known RBP	11.75	□□□□□ -0.53
ATXN3-210	ENST00000507965	ATN1	P54259	1190 aa	Predicted RBP	11.74	□□□□□ -0.53
ATXN3-210	ENST00000507965	MAMSTR	Q6ZN01	415 aa		11.74	□□□□□ -0.53
ATXN3-210	ENST00000507965	POTEM	A6NI47	508 aa		11.71	□□□□□ -0.53
ATXN3-210	ENST00000507965	MAP3K13	O43283	966 aa		11.7	□□□□□ -0.54
ATXN3-210	ENST00000507965	RASEF	Q8IZ41	740 aa		11.7	□□□□□ -0.54
ATXN3-210	ENST00000507965	PLCD3	Q8N3E9	789 aa		11.7	□□□□□ -0.54
ATXN3-210	ENST00000507965	POTEJ	P0CG39	1038 aa		11.69	□□□□□ -0.54
ATXN3-210	ENST00000507965	BMP2K	Q9NSY1	1161 aa	Predicted RBP	11.69	□□□□□ -0.54
ATXN3-210	ENST00000507965	SCRIB	Q14160	1630 aa		11.68	□□□□□ -0.54
ATXN3-210	ENST00000507965	POTEG	Q6S5H5	508 aa		11.68	□□□□□ -0.54
ATXN3-210	ENST00000507965	DCAF1	Q9Y4B6	1507 aa		11.67	□□□□□ -0.54
ATXN3-210	ENST00000507965	SCUBE2	Q9NQ36	999 aa		11.67	□□□□□ -0.54
ATXN3-210	ENST00000507965	TIE1	P35590	1138 aa		11.66	□□□□□ -0.54
ATXN3-210	ENST00000507965	TRPC6	Q9Y210	931 aa		11.66	□□□□□ -0.54
ATXN3-210	ENST00000507965	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.63	□□□□□ -0.55
ATXN3-210	ENST00000507965	CC2D2A	Q9P2K1	1620 aa		11.61	□□□□□ -0.55
ATXN3-210	ENST00000507965	SHROOM4	Q9ULL8	1493 aa		11.61	□□□□□ -0.55
ATXN3-210	ENST00000507965	SEC24B	O95487	1268 aa		11.59	□□□□□ -0.55
ATXN3-210	ENST00000507965	POTEF	A5A3E0	1075 aa		11.58	□□□□□ -0.56
ATXN3-210	ENST00000507965	TTLL13P	A6NNM8	815 aa		11.58	□□□□□ -0.56
ATXN3-210	ENST00000507965	PCDHB13	Q9Y5F0	798 aa		11.58	□□□□□ -0.56
ATXN3-210	ENST00000507965	FAM163A	Q96GL9	167 aa	Predicted RBP	11.57	□□□□□ -0.56
ATXN3-210	ENST00000507965	SGIP1	Q9BQI5	828 aa		11.56	□□□□□ -0.56
ATXN3-210	ENST00000507965	EIF4G1	Q04637	1599 aa	Known RBP	11.55	□□□□□ -0.56
ATXN3-210	ENST00000507965	PCDH10	Q9P2E7	1040 aa		11.55	□□□□□ -0.56
ATXN3-210	ENST00000507965	NUBP1	P53384	320 aa		11.53	□□□□□ -0.56
ATXN3-210	ENST00000507965	TRIM35	Q9UPQ4	493 aa		11.53	□□□□□ -0.56
ATXN3-210	ENST00000507965	FAM212A	Q96EL1	285 aa		11.52	□□□□□ -0.57
ATXN3-210	ENST00000507965	COLQ	Q9Y215	455 aa	Predicted RBP	11.52	□□□□□ -0.57
ATXN3-210	ENST00000507965	CECR2	Q9BXF3	1484 aa		11.51	□□□□□ -0.57
ATXN3-210	ENST00000507965	FKBP8	Q14318	412 aa		11.5	□□□□□ -0.57
ATXN3-210	ENST00000507965	IER5L	Q5T953	404 aa		11.49	□□□□□ -0.57
ATXN3-210	ENST00000507965	LCE2D	Q5TA82	110 aa	Predicted RBP	11.47	□□□□□ -0.57
ATXN3-210	ENST00000507965	IFNL1	Q8IU54	200 aa		11.47	□□□□□ -0.57
ATXN3-210	ENST00000507965	TMEM106C	Q9BVX2	250 aa		11.45	□□□□□ -0.58
ATXN3-210	ENST00000507965	PLCG2	P16885	1265 aa		11.4	□□□□□ -0.58
ATXN3-210	ENST00000507965	DCAF8	Q5TAQ9	597 aa		11.4	□□□□□ -0.58
ATXN3-210	ENST00000507965	SLAIN1	Q8ND83	568 aa		11.37	□□□□□ -0.59
ATXN3-210	ENST00000507965	FBXO3	Q9UK99	471 aa		11.36	□□□□□ -0.59
ATXN3-210	ENST00000507965	PYGB	P11216	843 aa		11.35	□□□□□ -0.59
ATXN3-210	ENST00000507965	IRX5	P78411	483 aa	Predicted RBP	11.32	□□□□□ -0.6
ATXN3-210	ENST00000507965	CDAN1	Q8IWY9	1227 aa		11.28	□□□□□ -0.6
ATXN3-210	ENST00000507965	OCEL1	Q9H607	264 aa		11.28	□□□□□ -0.6
ATXN3-210	ENST00000507965	PCDHB8	Q9UN66	801 aa		11.28	□□□□□ -0.6
ATXN3-210	ENST00000507965	ST18	O60284	1047 aa		11.26	□□□□□ -0.61
ATXN3-210	ENST00000507965	KLHL34	Q8N239	644 aa		11.26	□□□□□ -0.61
ATXN3-210	ENST00000507965	GSE1	Q14687	1217 aa		11.23	□□□□□ -0.61
ATXN3-210	ENST00000507965	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.22	□□□□□ -0.61
ATXN3-210	ENST00000507965	VASP	P50552	380 aa	Predicted RBP	11.19	□□□□□ -0.62
ATXN3-210	ENST00000507965	GOLGA2	Q08379	1002 aa		11.19	□□□□□ -0.62
ATXN3-210	ENST00000507965	ZNF467	Q7Z7K2	595 aa	Predicted RBP	11.19	□□□□□ -0.62
ATXN3-210	ENST00000507965	SNPH	O15079	494 aa		11.18	□□□□□ -0.62
ATXN3-210	ENST00000507965	MKRN3	Q13064	507 aa	Known RBP	11.16	□□□□□ -0.62
ATXN3-210	ENST00000507965	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	11.14	□□□□□ -0.63
ATXN3-210	ENST00000507965	C3orf67	Q6ZVT6	689 aa		11.12	□□□□□ -0.63
ATXN3-210	ENST00000507965	SMARCA4	P51532	1647 aa		11.12	□□□□□ -0.63
ATXN3-210	ENST00000507965	CHRM1	P11229	460 aa	Predicted RBP	11.11	□□□□□ -0.63
ATXN3-210	ENST00000507965	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.11	□□□□□ -0.63
ATXN3-210	ENST00000507965	PDCD7	Q8N8D1	485 aa	Known RBP	11.1	□□□□□ -0.63
ATXN3-210	ENST00000507965	PSEN1	P49768	467 aa		11.09	□□□□□ -0.63
ATXN3-210	ENST00000507965	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.09	□□□□□ -0.63
ATXN3-210	ENST00000507965	NCAPD3	P42695	1498 aa		11.07	□□□□□ -0.64
ATXN3-210	ENST00000507965	MARVELD3	Q96A59	401 aa		11.07	□□□□□ -0.64
ATXN3-210	ENST00000507965	ATAD2B	Q9ULI0	1458 aa		11.06	□□□□□ -0.64
ATXN3-210	ENST00000507965	HMGXB3	Q12766	1538 aa		11.06	□□□□□ -0.64
ATXN3-210	ENST00000507965	SMARCA2	P51531	1590 aa		11.04	□□□□□ -0.64
ATXN3-210	ENST00000507965	ERCC6	Q03468	1493 aa		11.03	□□□□□ -0.64
ATXN3-210	ENST00000507965	CUX2	O14529	1486 aa		11.02	□□□□□ -0.65
ATXN3-210	ENST00000507965	PDAP1	Q13442	181 aa	Known RBP	11.02	□□□□□ -0.65
ATXN3-210	ENST00000507965	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.01	□□□□□ -0.65
ATXN3-210	ENST00000507965	NES	P48681	1621 aa		11.01	□□□□□ -0.65
ATXN3-210	ENST00000507965	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	11	□□□□□ -0.65
ATXN3-210	ENST00000507965	SPOCK2	Q92563	424 aa		11	□□□□□ -0.65
ATXN3-210	ENST00000507965	DNAJC5	Q9H3Z4	198 aa		11	□□□□□ -0.65
ATXN3-210	ENST00000507965	EMP3	P54852	163 aa		10.99	□□□□□ -0.65
ATXN3-210	ENST00000507965	SPNS2	Q8IVW8	549 aa		10.99	□□□□□ -0.65
ATXN3-210	ENST00000507965		G3V3G9	751 aa		10.98	□□□□□ -0.65
ATXN3-210	ENST00000507965	MMRN1	Q13201	1228 aa		10.98	□□□□□ -0.65
ATXN3-210	ENST00000507965	THOC2	Q8NI27	1593 aa	Known RBP	10.98	□□□□□ -0.65
ATXN3-210	ENST00000507965	PEG3	Q9GZU2	1588 aa		10.98	□□□□□ -0.65
ATXN3-210	ENST00000507965	CABP2	Q9NPB3	220 aa		10.97	□□□□□ -0.65
ATXN3-210	ENST00000507965	BAZ1B	Q9UIG0	1483 aa	Known RBP	10.97	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms